Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G147200.1 | Wheat | plastid | 99.21 | 78.71 |
TraesCS1B01G165300.1 | Wheat | plastid | 98.16 | 77.87 |
HORVU0Hr1G000300.2 | Barley | cytosol | 83.16 | 71.98 |
OQU79118 | Sorghum | plastid | 43.16 | 67.49 |
Os12t0488700-00 | Rice | cytosol | 69.74 | 52.27 |
Zm00001d023648_P003 | Maize | plastid | 63.95 | 51.27 |
GSMUA_Achr8P26680_001 | Banana | cytosol | 30.79 | 38.61 |
GSMUA_Achr1P14210_001 | Banana | cytosol | 35.53 | 37.82 |
CDY07525 | Canola | peroxisome | 9.21 | 36.46 |
Solyc11g045480.1.1 | Tomato | mitochondrion | 18.42 | 34.48 |
GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 28.95 | 29.33 |
Bra028728.1-P | Field mustard | nucleus | 31.32 | 29.24 |
TraesCS5D01G380300.1 | Wheat | cytosol | 29.21 | 27.89 |
Bra009206.1-P | Field mustard | nucleus | 31.05 | 27.63 |
GSMUA_Achr3P15020_001 | Banana | nucleus | 32.37 | 27.27 |
KRH68055 | Soybean | cytosol | 33.16 | 26.92 |
KRH32933 | Soybean | nucleus | 34.47 | 26.73 |
KRH71751 | Soybean | nucleus | 33.95 | 26.33 |
AT5G06560.1 | Thale cress | nucleus | 34.47 | 25.29 |
Bra034805.1-P | Field mustard | nucleus | 29.21 | 24.83 |
VIT_08s0032g00720.t01 | Wine grape | plastid | 33.42 | 24.42 |
PGSC0003DMT400022326 | Potato | nucleus | 31.84 | 24.4 |
PGSC0003DMT400072288 | Potato | plastid | 32.89 | 24.22 |
Bra038684.1-P | Field mustard | nucleus | 23.42 | 22.08 |
AT3G11850.2 | Thale cress | nucleus | 29.21 | 22.02 |
KRG96316 | Soybean | cytosol | 30.26 | 19.83 |
CDY07526 | Canola | nucleus | 12.37 | 16.32 |
TraesCS5D01G410200.1 | Wheat | nucleus | 15.26 | 15.3 |
TraesCS7D01G282800.1 | Wheat | nucleus | 13.42 | 11.7 |
TraesCS2D01G272500.1 | Wheat | plastid | 13.95 | 10.93 |
TraesCS5D01G451800.1 | Wheat | endoplasmic reticulum | 12.37 | 7.29 |
TraesCS4D01G218100.3 | Wheat | mitochondrion | 15.0 | 6.76 |
TraesCS4D01G041500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 13.95 | 5.89 |
TraesCS1D01G135800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 9.47 | 5.78 |
TraesCS4D01G278300.1 | Wheat | golgi, vacuole | 11.05 | 5.58 |
TraesCS3D01G309900.1 | Wheat | golgi | 11.84 | 5.17 |
Protein Annotations
EnsemblPlants:TraesCS1D01G145300.1 | EnsemblPlantsGene:TraesCS1D01G145300 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:+:200711508..200716215
Molecular Weight (calculated)
41664.0 Da
IEP (calculated)
9.419
GRAVY (calculated)
-0.433
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMILRLQRE KAEAMMEARQ FRRYAEEKMS HDAAELAVLE ETIAKREASV RGLQSLSRLS VANAASLHST PRVSSTPRNP STPSTVGAGG YYPPLRCFSS
101: RFNDHPPTAS EADVLDMQTP RDHLARLSNR VQMLEHRAPP TSTTTPIIRV APGSTFPRNP RPFSDTDSLD FCDGEYFPDD DCGASDRVYT VDAIHGRGVP
201: LVVPEGSICG GTPAGSECCA GGPWGEDEDM RRLSARLQAL EADRETMRQA IISMGAEKAQ VVLLKEIAQQ LCKDAPPPLP AVTVGQHYYK GAAPPAVTVT
301: VPRPQRPMVM HRMVLKSQPT RTPFFSTVVK WVASIVSWRR KSSRIKYPIG QCGNNVGLML LLDKSSKAAG NGHHKPPKRI
101: RFNDHPPTAS EADVLDMQTP RDHLARLSNR VQMLEHRAPP TSTTTPIIRV APGSTFPRNP RPFSDTDSLD FCDGEYFPDD DCGASDRVYT VDAIHGRGVP
201: LVVPEGSICG GTPAGSECCA GGPWGEDEDM RRLSARLQAL EADRETMRQA IISMGAEKAQ VVLLKEIAQQ LCKDAPPPLP AVTVGQHYYK GAAPPAVTVT
301: VPRPQRPMVM HRMVLKSQPT RTPFFSTVVK WVASIVSWRR KSSRIKYPIG QCGNNVGLML LLDKSSKAAG NGHHKPPKRI
001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
Arabidopsis Description
MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.