Factsheet for TraesCS1D01G135800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G153100.1	Wheat	cytosol, golgi, mitochondrion, plastid	95.67	95.67
HORVU1Hr1G035080.2	Barley	cytosol, golgi, mitochondrion, plastid	90.69	90.54
Os10t0414800-01	Rice	mitochondrion, nucleus, plastid, vacuole	63.24	65.89
KXG38537	Sorghum	golgi, plasma membrane, plastid	56.82	62.99
Zm00001d032962_P003	Maize	endoplasmic reticulum, nucleus, plasma membrane	51.85	52.35
TraesCS4D01G278300.1	Wheat	golgi, vacuole	47.03	38.91
GSMUA_AchrUn_...	Banana	golgi, vacuole	33.71	32.92
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	30.02	31.86
TraesCS5D01G451800.1	Wheat	endoplasmic reticulum	22.63	21.86
VIT_07s0141g00860.t01	Wine grape	golgi	26.65	21.73
KRH19519	Soybean	golgi	28.89	21.05
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	28.73	20.79
TraesCS3D01G309900.1	Wheat	golgi	28.73	20.57
KRG97006	Soybean	plastid	27.77	20.14
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	29.37	20.09
VIT_14s0081g00320.t01	Wine grape	nucleus	23.27	19.95
KRH68762	Soybean	golgi, plasma membrane	27.61	19.91
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.77	19.79
KRH32143	Soybean	extracellular	24.24	19.61
KRH15931	Soybean	nucleus	14.29	19.6
TraesCS4D01G218100.3	Wheat	mitochondrion	24.4	18.03
CDY10753	Canola	endoplasmic reticulum, plasma membrane	20.39	17.86
CDY47125	Canola	endoplasmic reticulum, plasma membrane	20.55	17.75
CDY29652	Canola	endoplasmic reticulum	20.39	17.42
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	19.1	17.37
CDX95032	Canola	endoplasmic reticulum, vacuole	26.65	17.35
Bra018599.1-P	Field mustard	extracellular, vacuole	26.65	17.33
CDX93536	Canola	extracellular, vacuole	26.65	17.22
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	20.55	16.84
TraesCS4D01G041500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	24.24	16.78
Bra021657.1-P	Field mustard	endoplasmic reticulum	19.9	16.71
CDY67896	Canola	endoplasmic reticulum, vacuole	20.22	16.51
AT1G08800.1	Thale cress	extracellular, vacuole	26.81	15.0
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	27.61	14.93
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	27.13	14.68
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	27.13	14.14
TraesCS2D01G272500.1	Wheat	plastid	10.43	13.4
TraesCS5D01G410200.1	Wheat	nucleus	7.54	12.4
TraesCS7D01G282800.1	Wheat	nucleus	8.19	11.7
TraesCS5D01G380300.1	Wheat	cytosol	6.74	10.55
TraesCS1D01G145300.1	Wheat	cytosol	5.78	9.47

Protein Annotations

EnsemblPlants:TraesCS1D01G135800.1	EnsemblPlantsGene:TraesCS1D01G135800	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31448
PANTHER:PTHR31448:SF6	PFAM:PF04576	PFscan:PS51775	SEG:seg	TMHMM:TMhelix	MapMan:20.2.4.3

Description

No Description!

Coordinates

chr1D:+:179436047..179438045

Molecular Weight (calculated)

69515.8 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.489

Length

623 amino acids

Sequence
(BLAST)

001: MAVKTGVRSQ DFSQRFWYTL SRAICELCVI ILLHVAATTS YVATRLAHIS RLRAPCTMCS RLDQALHGKA WFSADLVCAA HRSEISSLAY CKSHNNLAHS
101: ADLCKRCHAA CTLAGFVDEV NSRSGSRSRQ LCSCCLEPFK KACIAHKLYE TADVKGPSHN VHGLDEIKQR SQVVVIEKIN PAMPPKFVPE QVSTDHSKVK
201: VGIEEVRESD ASPGTYEQST KDNGASSNAG LAAKPAPNAS SLPSRIFVDR NNSIKNTFVG RVNLPSPRPS EIISARDNNS TTQQEVKALL TQMSSVRGLD
301: YSWTEGVSST DTMIQNDESN GTSRRPYLER NYSVLESSDA NLGICEAEGE ISLESLKRQI EINKKSMLVL YKELEEERSA SAIAASQAMA MINRLHEEKA
401: AMQMEALQYL RMMEEQADHD HEAIQNLHDL LTEREKELLD MDAELDSCRR LLQHDQFNGG NFDDTVDNTP GYDKNVSFDV LNASDFMTST MSGFEEEKAY
501: ILESLGRLEE KLRISTYKLA SDDAKNIQET LLGDHIGDES TSFQQSIEQK DKDECSCSPF DNEKISGLNN LQDEISLLDT RLRALEDDHE FLKRVLSSLK
601: GDGLQCVRDI MSHLHELRRV AAQ

Best Arabidopsis Sequence Match ( AT5G16720.1 )
(BLAST)

001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE

Arabidopsis Description

MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.