Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G279900.1 | Wheat | golgi, vacuole | 96.28 | 91.08 |
| HORVU4Hr1G074110.1 | Barley | golgi | 90.57 | 87.77 |
| TraesCS4A01G023700.1 | Wheat | golgi, vacuole | 92.03 | 85.66 |
| Os03t0164800-00 | Rice | golgi, mitochondrion | 55.11 | 57.01 |
| EER92810 | Sorghum | mitochondrion | 58.3 | 55.57 |
| Zm00001d048439_P007 | Maize | golgi, mitochondrion, nucleus, plastid | 54.45 | 51.25 |
| TraesCS1D01G135800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 38.91 | 47.03 |
| GSMUA_Achr1P05380_001 | Banana | golgi, plasma membrane | 27.76 | 35.6 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 28.02 | 33.07 |
| VIT_07s0141g00860.t01 | Wine grape | golgi | 25.63 | 25.26 |
| VIT_14s0081g00320.t01 | Wine grape | nucleus | 22.58 | 23.38 |
| TraesCS5D01G451800.1 | Wheat | endoplasmic reticulum | 19.92 | 23.26 |
| KRH15931 | Soybean | nucleus | 13.68 | 22.69 |
| KRH68762 | Soybean | golgi, plasma membrane | 25.9 | 22.57 |
| KRG97006 | Soybean | plastid | 25.63 | 22.47 |
| PGSC0003DMT400070777 | Potato | golgi, plasma membrane, plastid | 25.37 | 22.18 |
| TraesCS3D01G309900.1 | Wheat | golgi | 25.37 | 21.95 |
| KRH19519 | Soybean | golgi | 24.57 | 21.64 |
| Solyc01g097040.2.1 | Tomato | golgi, plasma membrane, plastid | 26.16 | 21.62 |
| KRH32143 | Soybean | extracellular | 21.25 | 20.78 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.58 | 19.45 |
| TraesCS4D01G218100.3 | Wheat | mitochondrion | 21.51 | 19.22 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 17.66 | 18.71 |
| CDY29652 | Canola | endoplasmic reticulum | 17.93 | 18.52 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 17.66 | 18.45 |
| Bra018297.1-P | Field mustard | endoplasmic reticulum, extracellular | 16.6 | 18.25 |
| TraesCS4D01G041500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 21.65 | 18.11 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 22.97 | 18.08 |
| Bra018599.1-P | Field mustard | extracellular, vacuole | 22.84 | 17.95 |
| AT2G30690.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 18.06 | 17.89 |
| CDX93536 | Canola | extracellular, vacuole | 22.84 | 17.84 |
| Bra021657.1-P | Field mustard | endoplasmic reticulum | 17.4 | 17.66 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 17.8 | 17.56 |
| PGSC0003DMT400080686 | Potato | endoplasmic reticulum, golgi, plastid | 24.17 | 15.81 |
| AT1G08800.1 | Thale cress | extracellular, vacuole | 22.97 | 15.54 |
| Solyc09g066140.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 24.3 | 15.31 |
| Bra030742.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plastid, vacuole | 22.84 | 14.93 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 6.77 | 13.46 |
| TraesCS2D01G272500.1 | Wheat | plastid | 8.5 | 13.2 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 6.77 | 11.7 |
| TraesCS1D01G145300.1 | Wheat | cytosol | 5.58 | 11.05 |
| TraesCS5D01G380300.1 | Wheat | cytosol | 5.58 | 10.55 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G278300.1 | EnsemblPlantsGene:TraesCS4D01G278300 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31448 |
| PANTHER:PTHR31448:SF7 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | TMHMM:TMhelix | MapMan:20.2.4.3 |
Description
No Description!
Coordinates
chr4D:-:449982441..449984781
Molecular Weight (calculated)
84779.8 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.756
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKARARPR YSWRRFWLVL CHALSECFLI VMLLVVAVVS YTATRFARIC RIRSPCMLCS RLDKVLHGKA WFSEELVCAA HRVEIARLSY CQIHSKLAHS
101: DDLCGKCLVS CSGPVGQPGN PTNMSVKEKA GHTQRCSCCS EPFTKRDNAH KLFEEVNGRS QNDGMSKVKE RSMATASVGH SSDEDFDQLP YGGYRKLHDS
201: QSEIHVSDDD VGGDAKPYEA KRRTRDLDER SKAVPGQVRQ ELPKEKTFLV GIEEVGDLEG VSRSPDQEAN GARSTTNHYV NRNNSMKNAP GGRGNLRSPR
301: WSEVISAKET NSTTHEEVKT FMSQLSSARG LDGPWSEVAA SPRISIQIDE YSQSDATDGR QFLDLEPSDG QVPTEAEGEI SLESLKKQCE LNKKKLSILY
401: KELDAERSAS SVAASEAMAM INRLQVEKAA MHMEALQYLR MMEEQADHDQ EEIGKLNDLL TEREKEMLDL EAELEGYESR FRIEPFELGK FDAIDGDMAL
501: RVLDNSDFVR NTIFDFEDEK AKILESLSRL EETLGMPYTN RFDLGGTSDS LQSGSLRDHP TDWPGQSVEN SELESRSSLL PQEHLNDDSL RDHPSDGPGQ
601: HAENSELERR NSLMPQEDLN DESLRDHPSD GPGQYVENQE SECQSSPLPQ EDLKDESVSL QRNDENQSAE NQKYVGPCSR SDDDKISSME SIKQEILLLN
701: SRFMALEADQ KFLKQILSSL KCSSDAEQYV QEITSHLREL RRIATEQRDR TAL
101: DDLCGKCLVS CSGPVGQPGN PTNMSVKEKA GHTQRCSCCS EPFTKRDNAH KLFEEVNGRS QNDGMSKVKE RSMATASVGH SSDEDFDQLP YGGYRKLHDS
201: QSEIHVSDDD VGGDAKPYEA KRRTRDLDER SKAVPGQVRQ ELPKEKTFLV GIEEVGDLEG VSRSPDQEAN GARSTTNHYV NRNNSMKNAP GGRGNLRSPR
301: WSEVISAKET NSTTHEEVKT FMSQLSSARG LDGPWSEVAA SPRISIQIDE YSQSDATDGR QFLDLEPSDG QVPTEAEGEI SLESLKKQCE LNKKKLSILY
401: KELDAERSAS SVAASEAMAM INRLQVEKAA MHMEALQYLR MMEEQADHDQ EEIGKLNDLL TEREKEMLDL EAELEGYESR FRIEPFELGK FDAIDGDMAL
501: RVLDNSDFVR NTIFDFEDEK AKILESLSRL EETLGMPYTN RFDLGGTSDS LQSGSLRDHP TDWPGQSVEN SELESRSSLL PQEHLNDDSL RDHPSDGPGQ
601: HAENSELERR NSLMPQEDLN DESLRDHPSD GPGQYVENQE SECQSSPLPQ EDLKDESVSL QRNDENQSAE NQKYVGPCSR SDDDKISSME SIKQEILLLN
701: SRFMALEADQ KFLKQILSSL KCSSDAEQYV QEITSHLREL RRIATEQRDR TAL
001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
Arabidopsis Description
MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.