CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048439_P007	Maize	golgi, mitochondrion, nucleus, plastid	79.62	78.62
Os03t0164800-00	Rice	golgi, mitochondrion	58.61	63.6
TraesCS4D01G278300.1	Wheat	golgi, vacuole	55.57	58.3
HORVU4Hr1G074110.1	Barley	golgi	56.33	57.27
TraesCS4B01G279900.1	Wheat	golgi, vacuole	55.19	54.77
TraesCS4A01G023700.1	Wheat	golgi, vacuole	55.32	54.02
KXG38537	Sorghum	golgi, plasma membrane, plastid	36.33	51.07
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	27.47	36.97
GSMUA_AchrUn_...	Banana	golgi, vacuole	27.72	34.33
VIT_07s0141g00860.t01	Wine grape	golgi	26.2	27.09
KRH68762	Soybean	golgi, plasma membrane	28.23	25.81
KRG97006	Soybean	plastid	27.85	25.61
VIT_14s0081g00320.t01	Wine grape	nucleus	23.54	25.58
EER93280	Sorghum	golgi, vacuole	23.04	25.35
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	26.96	24.74
KRH19519	Soybean	golgi	26.46	24.44
KRH32143	Soybean	extracellular	23.67	24.29
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	27.72	24.04
KRH15931	Soybean	nucleus	13.42	23.35
EES01549	Sorghum	golgi	25.95	22.63
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.43	22.08
CDY10753	Canola	endoplasmic reticulum, plasma membrane	19.24	21.38
CDY47125	Canola	endoplasmic reticulum, plasma membrane	19.37	21.22
CDX95032	Canola	endoplasmic reticulum, vacuole	25.57	21.11
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	18.23	21.02
Bra018599.1-P	Field mustard	extracellular, vacuole	25.44	20.98
CDX93536	Canola	extracellular, vacuole	25.57	20.95
CDY29652	Canola	endoplasmic reticulum	18.86	20.44
Bra021657.1-P	Field mustard	endoplasmic reticulum	18.73	19.95
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	18.86	19.61
CDY67896	Canola	endoplasmic reticulum, vacuole	18.73	19.4
EER95149	Sorghum	mitochondrion	20.51	18.6
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	26.2	17.98
AT1G08800.1	Thale cress	extracellular, vacuole	24.81	17.61
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	25.32	17.36
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	25.44	16.82
OQU91120	Sorghum	endoplasmic reticulum, plastid	21.01	15.9
KXG28744	Sorghum	cytosol	8.35	14.57
OQU91257	Sorghum	nucleus	9.11	14.09
OQU91677	Sorghum	endoplasmic reticulum, golgi	8.23	13.54
OQU80230	Sorghum	cytosol	6.58	13.0
OQU80548	Sorghum	nucleus	8.1	12.12
OQU79118	Sorghum	plastid	2.15	7.0

Protein Annotations

MapMan:20.2.4.3	EntrezGene:8082144	UniProt:C5WWW5	ncoils:Coil	EnsemblPlants:EER92810	ProteinID:EER92810
ProteinID:EER92810.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656	PFAM:PF04576	PFscan:PS51775
PANTHER:PTHR31448	PANTHER:PTHR31448:SF7	EnsemblPlantsGene:SORBI_3001G494400	TMHMM:TMhelix	UniParc:UPI0001A82AD3	RefSeq:XP_002465812.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:76351683..76356409

Molecular Weight (calculated)

88777.8 Da

IEP (calculated)

5.138

GRAVY (calculated)

-0.662

Length

790 amino acids

Sequence
(BLAST)

001: MAAQARARPR NFSRQFWPVL RHAISECCLI IMLVATAVLS YMATRFARMC SLRSPCMLCS RLDRFLHGKA WFSEELVCAA HRLEISRLSY CQSHKKLERS
101: DDMCDRCLLS CSTCNLTNIN ARDKVKSRSR SRHKQLCSCC SVRFKKKRDS HMLPDIANNR FPDDDMSKLK QRSIAMPSVE HSSDEGSDHL PYEGYRELKV
201: GYESESEVHI SGSDDDESNA VPHDARERAH HISSRDVQLQ PMISNAIGSS MLPSDNTVMT KPPLNTARDT DSKSSDTKVA KSLDRAIGHG LDDISWSQIN
301: ASDNSINMQS KAVPEQVSAE LPKEKTFLVG IEEVGDSFEG VSGSPDVEVA KDFATSGNAG TSSSADTHVS RNNSMKNASA SRGYLKSPRL SEIISARDTN
401: SKTNEEVKTF LSQLSTARGF DGSLNEMTSS PRSGIQIDEY RQYDATGMAP FLDRNNSNLD PFDVNATSED EGESSMERLK QQAEINRKKM SMLYKELEAE
501: RSASAVAASE AMAMINRLQE EKASMHMEAL QYLRMMEEQA DHDQEAIEKL NDLLTEREKE LLDLEAELEG YQSKLHDQPF DVGKFGATGG AMTFGVLDSS
601: DFMRHTIFDF EDEKAKILES LHRLEETLGM PSTNRLDMGD ANDTLQNSLL SDHSMSSSQY IENTELESSP LPREDLISES ISSQHNDEEE SVRYVHSHSH
701: KKDENEFVEK QKNVTSCSHI DDTDTMKSIK HDISLLNARF KALEADQDFL KQILSSLNVS SDGVQFVQEI TSHLREMRRI MADQREMTVL

Best Arabidopsis Sequence Match ( AT1G08800.1 )
(BLAST)

0001: MGSRSFTRAL ALAFNEWLLM FMLFVNSIFS YVIARFADYS ELQSPCLMCS NLDHILRRTK DLKKTHWDII CSKHKSEISS LVYCHAHGKL VDVRGMCETC
0101: LFSFATTNKS NAETYRLLVG KLGEDSHFGS KSDRSKYPNC SKLTDCTCCN QLWTPQTAAT QVAEREILPK IGLLGKIRTG KQSAPKKSVS FNHLPDVGYT
0201: ELKIHSDTES EAVFSDTEPK QESSLNHLPP VGYNEPKIGL VGDVRTGKPS TPKKSVSFNH LPDVGYTELK IHSDTESEAV FSEDECVVLK DEDHKYQIVD
0301: LQTHPIITLP YDLATDKLLN FDFPLEPFVT RNDREEVQLQ ETNWRTYSSF PVLIPVNDVP ETSEKVFKEE EINSLDNLFL TSRAMKHFAA AKVKEEPIRL
0401: QDISSTPDVK ENPANASLME ETELICLSDV TATSGAMEHS EVILKEREEL IHLQDISVTP DFKENPANAS LLEETELICL NDVTSPLRAV EHSAVLLKDK
0501: VEPIRLQDGG SLTPDFMENS ANASILEETE LICVNDVTST SRTMGHSSVV LKENEEPIRF QDSSLTPDFK ENPASTFLVE ETELICLNDV TSPSRAMEHS
0601: TVFIEEKEEL VRHQNITLTQ DFMENPANSS LREETELICL NDVTSTSEVA ETPEDVLEGI ELMSIHDISL DEVSESVTTN QTSVEISKER DTDQADITSL
0701: ESEYIVVPSP NSMPENSTDN CVSDKKEMKE TSLRISSLSE MAPRDVTSHT EAALESESSS FNSMSVAAET NQYSGELLDL ADAYNIVVGN EGHYDSNGRQ
0801: QIENWMKKDT SRVSEDLKAL LTQISASRGI EFLSPRDVSP KISVNSSDQE TKNLDHDMQL LLQKRMLERN ESNLSLEGVS VTEIEGESEG DRLKRQVDYD
0901: RKLLTGLYKE LEEERSASAV ATNQAMAMIT RLQEEKASFQ MEALQNLRMM EEQAEYDMEA IQRLNDLLVE REKLIQDLEA EIEYFRDQTP QKKNKLDVAE
1001: KVTEMDSPSE GMSNKIQSCL VGFDEERLYI TSCLEKIENR VNGKAHDDNL PAQESVSELH ERVERLKGDL YFLEQVMNSL GHGNEGVQFV KEIASHLQTL
1101: RSLSMKRQDQ TEC

Arabidopsis Description

MYOB1Myosin-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HXQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.