CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047881_P002	Maize	mitochondrion	85.88	85.88
Zm00001d033125_P001	Maize	nucleus	14.24	77.99
Os03t0259900-01	Rice	mitochondrion	70.84	68.56
TraesCS4B01G217800.2	Wheat	mitochondrion	65.67	67.69
TraesCS4D01G218100.3	Wheat	mitochondrion	65.1	67.26
TraesCS4A01G086600.5	Wheat	mitochondrion	65.33	65.78
HORVU4Hr1G061850.1	Barley	plastid	64.75	60.52
CDY09477	Canola	nucleus	9.07	42.47
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	35.13	38.69
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	39.15	37.31
AT5G16720.1	Thale cress	endoplasmic reticulum, golgi, vacuole	27.78	35.85
CDY16985	Canola	endoplasmic reticulum, golgi	27.78	35.64
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	38.46	35.64
CDX69426	Canola	endoplasmic reticulum, golgi, plastid	27.9	35.53
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	28.13	35.51
Solyc04g007870.2.1	Tomato	endoplasmic reticulum, golgi	33.52	35.1
PGSC0003DMT400075922	Potato	endoplasmic reticulum, golgi	33.52	34.03
AT1G70750.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion	27.67	32.18
VIT_14s0006g00920.t01	Wine grape	endoplasmic reticulum, golgi	33.3	31.83
KRH38243	Soybean	endoplasmic reticulum, plasma membrane	31.46	31.46
KRH42532	Soybean	endoplasmic reticulum, golgi	35.71	31.32
KRH58626	Soybean	endoplasmic reticulum, golgi	35.59	31.31
OQU91120	Sorghum	endoplasmic reticulum, plastid	36.97	30.84
VIT_01s0011g05340.t01	Wine grape	endoplasmic reticulum, golgi	37.89	30.84
CDX96274	Canola	mitochondrion	25.95	30.71
CDY11550	Canola	mitochondrion	26.18	28.57
Bra016190.1-P	Field mustard	mitochondrion	27.55	27.55
KRH72995	Soybean	endoplasmic reticulum, golgi	33.41	27.27
KXG38537	Sorghum	golgi, plasma membrane, plastid	17.57	27.22
KRH17362	Soybean	endoplasmic reticulum, golgi, vacuole	33.52	26.89
EER93280	Sorghum	golgi, vacuole	18.14	22.01
EER92810	Sorghum	mitochondrion	18.6	20.51
EES01549	Sorghum	golgi	21.24	20.42
KXG28744	Sorghum	cytosol	8.61	16.56
OQU80230	Sorghum	cytosol	7.58	16.5
OQU91677	Sorghum	endoplasmic reticulum, golgi	9.07	16.46
OQU91257	Sorghum	nucleus	9.18	15.66
OQU79118	Sorghum	plastid	3.67	13.17
OQU80548	Sorghum	nucleus	6.77	11.17

Protein Annotations

MapMan:20.2.4.3	EntrezGene:8054309	UniProt:C5WQS3	ncoils:Coil	ProteinID:EER95145.2	EnsemblPlants:EER95149
ProteinID:EER95149	ProteinID:EER95149.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656	PFAM:PF04576
PFscan:PS51775	PANTHER:PTHR31448	PANTHER:PTHR31448:SF3	EnsemblPlantsGene:SORBI_3001G430700	unigene:Sbi.6698	TMHMM:TMhelix
UniParc:UPI0001A831C0	RefSeq:XP_002468151.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:70977627..70981373

Molecular Weight (calculated)

96028.4 Da

IEP (calculated)

3.986

GRAVY (calculated)

-0.586

Length

871 amino acids

Sequence
(BLAST)

001: MAASAGKLAA ALHRRTRRVT SALAYAALEW VLIALLLING VLAYAIARFA DYFGLSPPCL LCSRVDRLFL QAEGGDAEAG AARWLRDALC GDHAAEISAL
101: GYCLRHHRLA EAGEMCDGCR SEWKEKTSDA AGACTCCKAV VRTSLREQED TITRDQHVLE KITEEVEDDD QGYVLLAQDD HEEDEEEPDE VESQEQEQQS
201: EVEGQQQEDE VMASVQDESL EFMDQVEDIT AIGDDRLVSV VALDEMTIAD DSGLHRDVEE EDGVNRVVED EQDSRDVDIG VVLEEKRMLD SSVATPADVI
301: EDSVMPISPV PCPEILTNPS HPDHNSISQD DGDVPEDTAE IGDSTAEEEH IFVPQEANFE DDNRTAEVDT NCEVSIGSDI CEREQDDHVV PFQDLAALEE
401: PVSPLSAADD LPLPLEILDP TEQEEAGEVE QEEVTTSTGL DLQPNEQSEI EEDKAPETPT NSAATQRSDR MFLLERKRSL SLSLDGSVAS EMEGGEPSTV
501: DQLKSALQAE RKALGALYAE LEEERNAAAI ATNQTMAMIN RLQEEKAAMQ MEALQYQRMM EEQSEYDQEA LQLLNELVTK REREKQELER ELELYRQKVQ
601: HYEDRERRRT ASFKANGVSV SPSGNGTSVS SSGEESDGHS DDYCELGESP DVGNVQSSSD AALGSMRDQE GTKHLAALDD SLTYFEMERL SILEELKTLE
701: ERLFTLEDDD TNTGKQAIGH SSIDFDLSAG GLQSPDYILS GDKARIGGRA SISRGKSLLP LFDAVGDETC DQMPSAGVGE ADQDDDSATK PVSVLVKEQE
801: RLAIIEEVDH VYERLQALEA DKEFLRHCIK SLKKGDKGMD LLQEILQHLR DLRNVELHVK NAGDAIAANS A

Best Arabidopsis Sequence Match ( AT5G16720.1 )
(BLAST)

001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE

Arabidopsis Description

MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.