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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G217800.2 Wheat mitochondrion 80.04 88.28
TraesCS4D01G218100.3 Wheat mitochondrion 79.51 87.9
TraesCS4A01G086600.5 Wheat mitochondrion 80.15 86.36
EER95149 Sorghum mitochondrion 60.52 64.75
Os03t0259900-01 Rice mitochondrion 62.12 64.33
Zm00001d033125_P001 Maize nucleus 10.94 64.15
Zm00001d047881_P002 Maize mitochondrion 59.33 63.49
CDY09477 Canola nucleus 8.48 42.47
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 32.08 37.8
GSMUA_Achr6P17030_001 Banana endoplasmic reticulum, golgi 35.62 36.32
GSMUA_Achr6P07650_001 Banana golgi, plasma membrane 34.55 34.26
AT5G16720.1 Thale cress endoplasmic reticulum, golgi, vacuole 24.79 34.22
HORVU4Hr1G007120.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 33.05 34.22
Bra008601.1-P Field mustard endoplasmic reticulum, golgi, plastid 25.21 34.06
CDY16985 Canola endoplasmic reticulum, golgi 24.79 34.02
Solyc04g007870.2.1 Tomato endoplasmic reticulum, golgi 30.36 34.01
CDX69426 Canola endoplasmic reticulum, golgi, plastid 24.89 33.92
PGSC0003DMT400075922 Potato endoplasmic reticulum, golgi 30.15 32.75
AT1G70750.1 Thale cress endoplasmic reticulum, golgi, mitochondrion 25.64 31.91
KRH42532 Soybean endoplasmic reticulum, golgi 33.26 31.22
KRH58626 Soybean endoplasmic reticulum, golgi 33.15 31.21
VIT_14s0006g00920.t01 Wine grape endoplasmic reticulum, golgi 30.36 31.06
CDX96274 Canola mitochondrion 24.36 30.84
KRH38243 Soybean endoplasmic reticulum, plasma membrane 28.43 30.42
VIT_01s0011g05340.t01 Wine grape endoplasmic reticulum, golgi 34.12 29.72
HORVU0Hr1G033330.3 Barley cytosol 25.75 28.34
CDY11550 Canola mitochondrion 24.25 28.32
Bra016190.1-P Field mustard mitochondrion 25.97 27.78
KRH17362 Soybean endoplasmic reticulum, golgi, vacuole 29.61 25.41
KRH72995 Soybean endoplasmic reticulum, golgi 28.97 25.3
HORVU1Hr1G035080.2 Barley cytosol, golgi, mitochondrion, plastid 15.99 23.88
HORVU4Hr1G074110.1 Barley golgi 17.6 21.11
HORVU3Hr1G075790.2 Barley golgi, mitochondrion 18.99 20.11
HORVU4Hr1G041430.2 Barley cytosol 7.19 15.84
HORVU0Hr1G000300.2 Barley cytosol 7.19 15.26
HORVU5Hr1G097200.5 Barley cytosol 6.44 14.02
HORVU2Hr1G066690.6 Barley cytosol, mitochondrion 5.47 11.51
HORVU5Hr1G092270.4 Barley cytosol, plastid 4.08 9.18
Protein Annotations
EnsemblPlants:HORVU4Hr1G061850.1EnsemblPlantsGene:HORVU4Hr1G061850GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0017022InterPro:GTD-bdInterPro:IPR007656ncoils:Coil
PANTHER:PTHR31448PANTHER:PTHR31448:SF3PFAM:PF04576PFscan:PS51775SEG:segTMHMM:TMhelix
UniParc:UPI000B47C1BCUniProt:A0A287PAL1MapMan:20.2.4.3:::
Description
No Description!
Coordinates
chrchr4H:+:519455835..519459614
Molecular Weight (calculated)
102369.0 Da
IEP (calculated)
4.224
GRAVY (calculated)
-0.696
Length
932 amino acids
Sequence
(BLAST)
001: GVQSNGRPGL SSPAQKVRAE EASTHDSSSH PQPDSFFLPS VSLGRQPDSD SISHARTHAR TPPRSRFSCR GGSRDQAGRE RAREGAMAAA SPTSRYAAAL
101: HRRTHRVTSA LAYAALEWVL IALLLLNGLL SHAVARFAAY FGLRPPCLLC SRADRLFGAE EEDGADQAAG DARWLRGLLC GAHAAEISGM GYCLHHRRLV
201: ADAADMCEGC LSSWKKEMMN DAEEAGAAVC SCCKALVQIT SSRELEGPAA QHEKAAVEGE EQGQGYVLLD QEDHEEEEEE QTEVEQPEQQ NEEEAQEQTG
301: EIKAAAVEDE SMEFMAQGEE ITPDDDDRLV PVVALDEMTI ADDSSLHPDA PGSEEGDMNR TADDERDLDA AVVLEEKRML ASSVATAPAM PENSIPQDDE
401: LVLEDTAETG DFRTDEGDIV VPQATEAIPE DGSKSAEVET NCEVSIGSDI CEQEQDGHGA PFQELVALEE LFSPLEYADD RTSPLQIRHE TAPAEQEASE
501: AEHEVTASRR FEYQSNDQNE EDEDRAPETP TYSFAAQNSG KRFLLERKRS LSLSLDGSVS SEVECAEPST VEQLRSALQA DRKTLSAMYA ELEEERNAAA
601: IATNQTMAMI NRLQEEKAAM QMEALQYQRM MEEQSEYDQE AMQLLTELVT KREREKQELE RELELCRQKV LHYEDKERRR MPAFKDNAHG PDGNGTSVSS
701: SGEDSDGHSD DDSCELGESP NGDGDLRSLP DATLSPRADQ ENTGHLVALD DSLTYMEMER LSILEELKAL EERLFTLEDD DIGDSNAATG HSSDDHGAHS
801: PENGVTGNKA KFEGRAFVSR GKSLLPLFDA VGDHNLDRAS PVDADDSTIP VPAVFAKEQE RLAIIEEVDH VYERLQALEA DKEFLRHCIK SLKKGDKGMH
901: LLQEILQHLR ELRSVELHGK HAADDAIAAN SA
Best Arabidopsis Sequence Match ( AT5G16720.1 )
(BLAST)
001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
Arabidopsis Description
MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.