Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075922 | Potato | endoplasmic reticulum, golgi | 94.71 | 91.84 |
| CDY09477 | Canola | nucleus | 11.78 | 52.69 |
| Os03t0708700-00 | Rice | cytosol, nucleus | 21.75 | 41.42 |
| VIT_01s0011g05340.t01 | Wine grape | endoplasmic reticulum, golgi | 52.52 | 40.84 |
| Zm00001d033125_P001 | Maize | nucleus | 7.57 | 39.62 |
| KRH38243 | Soybean | endoplasmic reticulum, plasma membrane | 41.47 | 39.61 |
| AT1G70750.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion | 34.5 | 38.32 |
| CDX96274 | Canola | mitochondrion | 33.77 | 38.18 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 34.62 | 36.41 |
| CDY11550 | Canola | mitochondrion | 33.77 | 35.21 |
| GSMUA_Achr6P17030_001 | Banana | endoplasmic reticulum, golgi | 37.86 | 34.46 |
| GSMUA_Achr6P07650_001 | Banana | golgi, plasma membrane | 38.58 | 34.15 |
| TraesCS4D01G218100.3 | Wheat | mitochondrion | 34.38 | 33.93 |
| Os03t0259900-01 | Rice | mitochondrion | 36.42 | 33.67 |
| TraesCS4B01G217800.2 | Wheat | mitochondrion | 34.13 | 33.61 |
| EER95149 | Sorghum | mitochondrion | 35.1 | 33.52 |
| Solyc11g045470.1.1 | Tomato | cytosol | 3.37 | 33.33 |
| Bra016190.1-P | Field mustard | mitochondrion | 34.74 | 33.18 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 20.67 | 33.14 |
| Zm00001d047881_P002 | Maize | mitochondrion | 34.62 | 33.07 |
| TraesCS4A01G086600.5 | Wheat | mitochondrion | 34.13 | 32.83 |
| Zm00001d013452_P002 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.77 | 31.72 |
| HORVU4Hr1G061850.1 | Barley | plastid | 34.01 | 30.36 |
| Solyc03g113600.2.1 | Tomato | golgi | 21.75 | 30.27 |
| TraesCS4A01G270100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 31.97 | 29.69 |
| TraesCS4D01G041500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 32.09 | 29.67 |
| TraesCS4B01G044000.1 | Wheat | plastid | 31.85 | 29.44 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 31.49 | 29.11 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 21.15 | 27.54 |
| OQU91120 | Sorghum | endoplasmic reticulum, plastid | 32.81 | 26.15 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 25.36 | 24.91 |
| Zm00001d033705_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 30.05 | 24.65 |
| Solyc01g097040.2.1 | Tomato | golgi, plasma membrane, plastid | 22.48 | 20.53 |
| Solyc10g081620.1.1 | Tomato | cytosol, plastid | 11.06 | 17.83 |
| Solyc07g005910.2.1 | Tomato | nucleus | 8.77 | 16.11 |
| Solyc11g020850.1.1 | Tomato | nucleus | 8.89 | 14.1 |
| Solyc12g098380.1.1 | Tomato | extracellular, plasma membrane, vacuole | 12.62 | 14.09 |
| Solyc09g066140.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 20.19 | 14.06 |
| Solyc12g009900.1.1 | Tomato | cytosol | 7.21 | 9.42 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 2.16 | 8.87 |
Protein Annotations
| MapMan:20.2.4.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0017022 |
| GO:GO:0030133 | InterPro:GTD-bd | InterPro:IPR007656 | UniProt:K4BNU4 | PFAM:PF04576 | PFscan:PS51775 |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF24 | EnsemblPlantsGene:Solyc04g007870.2 | EnsemblPlants:Solyc04g007870.2.1 | TMHMM:TMhelix | UniParc:UPI0002766BB6 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:1544722..1548298
Molecular Weight (calculated)
95335.1 Da
IEP (calculated)
4.154
GRAVY (calculated)
-0.639
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANKFATML HKNTNKITMI LIYAVLEWTL ISLLLLNSFF SYMIIKFANY FGLKPPCPLC SRIDHLFEHE KTKAFCKDLL CEAHAKEISQ LGFCLNHQKL
101: VESQDMCEDC LSSPHDDDNS RFECSCCDVK LEKKSTNESC EVDDLGDTQK GNLVIESTND DLVKERSDFD EEKTDLDGLV IEKVMKDQGV QVCVIEDSSF
201: EYSSQHLEFF VECSGHKLVP VELIDSTTEE DHCKNHETDE NCEKNDELVV EINKIEEEDK FAVLDSMEME EDENGFSFCV DECHSVKEFD EQFDQFHQES
301: AIDNVQIEVE SVREENDSDV TPEEVSEIQQ IDEIEAEVSI GNEIPDMNLS DEIPCEVSLD SCTHEEHFTS SAHFHDINQH GPTEDHDKLV ELKLLSLEFD
401: DHVMNNESLI SSKLDEIEEE KVPETPTSID SFYQLHKKLL LLEKKDFGTE SLDGSVVSEL EGGDAVSSIE HLKSALKAER KALHALYTEL EEERSASAVA
501: ANQTMAMINK LQEEKSAMQM EALQYQRMME EQSEYDQEAL QLLNELMVKR EKEKQELEKE LEVYRKRLSE YEAKEKAMRM LKRSKDGSVA RSGLFSSASC
601: SNGEDSEELS IDLNQEPKED VNFYCHQECD DHDNKVQVDA FLELEESFVD FEEERMSILE QLKMLEEKLI SMDDEDAKEF EDVRPMDDSY RENGDHTVVN
701: SRLDGEINEH ANGFLSEMNG KLIINPKGKG LLPLFDAMSD ENGDVMINGH ENGFHPNDVD EENKKLDIEE ELDLLHERLQ ALEADREFLK NCMSSLKKGD
801: KGMDLLHEIL QHLRDLKTVD LRVRSSSNGL IL
101: VESQDMCEDC LSSPHDDDNS RFECSCCDVK LEKKSTNESC EVDDLGDTQK GNLVIESTND DLVKERSDFD EEKTDLDGLV IEKVMKDQGV QVCVIEDSSF
201: EYSSQHLEFF VECSGHKLVP VELIDSTTEE DHCKNHETDE NCEKNDELVV EINKIEEEDK FAVLDSMEME EDENGFSFCV DECHSVKEFD EQFDQFHQES
301: AIDNVQIEVE SVREENDSDV TPEEVSEIQQ IDEIEAEVSI GNEIPDMNLS DEIPCEVSLD SCTHEEHFTS SAHFHDINQH GPTEDHDKLV ELKLLSLEFD
401: DHVMNNESLI SSKLDEIEEE KVPETPTSID SFYQLHKKLL LLEKKDFGTE SLDGSVVSEL EGGDAVSSIE HLKSALKAER KALHALYTEL EEERSASAVA
501: ANQTMAMINK LQEEKSAMQM EALQYQRMME EQSEYDQEAL QLLNELMVKR EKEKQELEKE LEVYRKRLSE YEAKEKAMRM LKRSKDGSVA RSGLFSSASC
601: SNGEDSEELS IDLNQEPKED VNFYCHQECD DHDNKVQVDA FLELEESFVD FEEERMSILE QLKMLEEKLI SMDDEDAKEF EDVRPMDDSY RENGDHTVVN
701: SRLDGEINEH ANGFLSEMNG KLIINPKGKG LLPLFDAMSD ENGDVMINGH ENGFHPNDVD EENKKLDIEE ELDLLHERLQ ALEADREFLK NCMSSLKKGD
801: KGMDLLHEIL QHLRDLKTVD LRVRSSSNGL IL
001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
Arabidopsis Description
MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.