Factsheet for VIT_01s0011g05340.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 3
nucleus 1
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09477	Canola	nucleus	9.72	55.91
Solyc04g007870.2.1	Tomato	endoplasmic reticulum, golgi	40.84	52.52
PGSC0003DMT400075922	Potato	endoplasmic reticulum, golgi	41.68	51.98
KRH38243	Soybean	endoplasmic reticulum, plasma membrane	40.56	49.83
VIT_14s0006g00920.t01	Wine grape	endoplasmic reticulum, golgi	41.22	48.41
Os03t0708700-00	Rice	cytosol, nucleus	19.35	47.37
AT1G70750.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion	31.59	45.13
Zm00001d033125_P001	Maize	nucleus	6.54	44.03
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	32.43	43.87
CDX96274	Canola	mitochondrion	28.88	41.98
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	34.21	40.04
CDY11550	Canola	mitochondrion	29.35	39.35
Bra016190.1-P	Field mustard	mitochondrion	31.31	38.46
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	33.64	38.3
EER95149	Sorghum	mitochondrion	30.84	37.89
TraesCS4B01G217800.2	Wheat	mitochondrion	29.91	37.87
TraesCS4D01G218100.3	Wheat	mitochondrion	29.63	37.6
Zm00001d047881_P002	Maize	mitochondrion	30.37	37.31
Os03t0259900-01	Rice	mitochondrion	31.03	36.89
Zm00001d013452_P002	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	27.66	36.68
TraesCS4A01G086600.5	Wheat	mitochondrion	29.63	36.65
TraesCS4A01G270100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	28.79	34.38
HORVU4Hr1G061850.1	Barley	plastid	29.72	34.12
TraesCS4D01G041500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	28.69	34.11
TraesCS4B01G044000.1	Wheat	plastid	28.6	34.0
HORVU4Hr1G007120.2	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	28.5	33.89
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	17.48	30.11
OQU91120	Sorghum	endoplasmic reticulum, plastid	29.25	29.98
HORVU0Hr1G033330.3	Barley	cytosol	22.8	28.81
Zm00001d033705_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.01	28.5
VIT_07s0141g00860.t01	Wine grape	golgi	17.29	24.21
VIT_14s0081g00320.t01	Wine grape	nucleus	14.67	21.6
VIT_08s0032g00720.t01	Wine grape	plastid	9.63	19.81
VIT_11s0037g00610.t01	Wine grape	nucleus	8.32	18.98
VIT_05s0029g00110.t01	Wine grape	endoplasmic reticulum, golgi	12.06	16.19

Protein Annotations

EntrezGene:100268019	wikigene:100268019	MapMan:20.2.4.3	ProteinID:CCB50807	ProteinID:CCB50807.1	ncoils:Coil
UniProt:F6HFF8	EMBL:FN595752	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
EntrezGene:LOC100268019	wikigene:LOC100268019	PFAM:PF04576	PFscan:PS51775	PANTHER:PTHR31448	PANTHER:PTHR31448:SF25
TIGR:TC60906	TIGR:TC68870	TMHMM:TMhelix	UniParc:UPI000210847A	ArrayExpress:VIT_01s0011g05340	EnsemblPlantsGene:VIT_01s0011g05340
EnsemblPlants:VIT_01s0011g05340.t01	unigene:Vvi.9011	RefSeq:XP_002280971	RefSeq:XP_002280971.2	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:4954112..4958324

Molecular Weight (calculated)

120735.0 Da

IEP (calculated)

4.144

GRAVY (calculated)

-0.585

Length

1070 amino acids

Sequence
(BLAST)

0001: MAANKFATML HRNTNKITLI LIYAVLEWIL IVLLLLNSLF SYLIVKFADY FGLKRPCLWC SRLDHIFEPE KGKTSYRGLV CETHAAEISK LGYCSNHRKL
0101: AELQDMCEDC SSSSRPDYCE LSKKIAFIPW VKQIGMIQSD GEKIVENGEV NLRCSCCDVS LNSKFYSPYF LIKPSWGVLD YTQKGNLITE TGIDDGIDEV
0201: DNSDRSRSDF AADRCEEDEG TNGNKGNQIL SDVDASSGTR EEEAEEDCSY SVSNFGCRET MASEDDKVEM IVEKAQEPIK EEGTKEQGGN FCIEDPFCDG
0301: NSSRVCAEED ASINIPPQHL EYYVDRDDFR LVPVELIDFT AADIQNGYRT EDVGQANWDR REVILGSEFG AEAQIESIME NKCSQGKPVA VEFCAHETKE
0401: EPELEFALVE SMEIDENENS STLRGEEGDL VWEVYQPVAI TQATQTPFND VVDVQETDAA AGGEKISETN PASVEVFRMR IDETEVEILI GTEMPDQAPT
0501: DKIRAQEILP SDPCIQEDPS TSSANLYADD DHCSEQAEEE TLECKTMTVE ISEQAINTHL LCTELNEIED EIEEAKVPNS PASIEGPTPA EEEALQCKTI
0601: LVETSEQAID THFSTCLELN EIEEERVPDT PTSIDGLNHL HKRLLLLEKR ESGTEESLDG SVISEFEGGD VGLTVEKLKS ALRSERKASS VLYAELEEER
0701: SASAVAANQT MAMINRLQEE KAAMQMEALQ YQRMMEEQSE YDQEALQLLN ELMIKREKEK QELEKELEIY RKKVLDYEAR EKMMLRRMKE GSARSRTSSA
0801: SCSNAEDSDG LSVELNHEEK EEDSLYGFRE SGDHNTPADA VLSLEESLAT FEEERLSILE QLKVLEEKLF TLADEEEHDP NNMKPIQHSY EENCKDFDEN
0901: CDHSPEVNGL GNGFSKDMNG KHHQERRISG PKAKRLLPLF DAIVAETEDG LLDGNDIVFD SFLLQDSSVT KFDIESKKNA IEEEVDNLYE RLQALEADRE
1001: FLKHCISSLN KGDKGMDLLQ EILQHLRDLR SVELRVRNFS DGALRIDWSF QVDLTAVNLD TSTHHSALMK

Best Arabidopsis Sequence Match ( AT1G70750.1 )
(BLAST)

001: MAANKFATLI HRKTNRITLI LVYAFLEWSL IFFILLNSLF SYFILRFADY FGLKRPCLFC SRLDRFFDAS GKSPSHRDLL CDDHALQLHS KPVEESNCGF
101: GEFHNDLVHR GCCVEKISSS LCAPIESDFG NLDYPIGDEG QIYNGLKFPR SIFVFEEEKV GSVNLNDSQE ETEEKKVPQS HEKLEDDDVD EEFSCYVSSF
201: DCKNKEIATE KEEENRVDLP IEVETAESAP KNLEFYIDEE DCHLIPVEFY KPSEEVREIS DINGDFILDF GVEHDFTAAA ETEEISDFAS PGESKPEDAE
301: TNLVASEMEN DDEETDAEVS IGTEIPDHEQ IGDIPSHQLI PHHDDDDHEE ETLEFKTVTI ETKMPVLNIN EERILEAQGS MESSHSSLHN AMFHLEQRVS
401: VDGIECPEGV LTVDKLKFEL QEERKALHAL YEELEVERNA SAVAASETMA MINRLHEEKA AMQMEALQYQ RMMEEQAEFD QEALQLLNEL MVNREKENAE
501: LEKELEVYRK RMEEYEAKEK MGMLRRRLRD SSVDSYRNNG DSDENSNGEL QFKNVEGVTD WKYRENEMEN TPVDVVLRLD ECLDDYDGER LSILGRLKFL
601: EEKLTDLNNE EDDEEEAKTF ESNGSINGNE HIHGKETNGK HRVIKSKRLL PLFDAVDGEM ENGLSNGNHH ENGFDDSEKG ENVTIEEEVD ELYERLEALE
701: ADREFLRHCV GSLKKGDKGV HLLHEILQHL RDLRNIDLTR VRENGDMSL

Arabidopsis Description

MYOB2Myosin-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC4]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.