Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0708700-00 | Rice | cytosol, nucleus | 21.51 | 44.85 |
| Zm00001d033125_P001 | Maize | nucleus | 7.79 | 44.65 |
| AT5G16720.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 31.39 | 42.37 |
| VIT_01s0011g05340.t01 | Wine grape | endoplasmic reticulum, golgi | 48.41 | 41.22 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 29.86 | 40.06 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 29.86 | 39.77 |
| Bra008601.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 29.97 | 39.57 |
| KRH17362 | Soybean | endoplasmic reticulum, golgi, vacuole | 46.76 | 39.23 |
| KRH72995 | Soybean | endoplasmic reticulum, golgi | 45.55 | 38.89 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 33.7 | 38.81 |
| GSMUA_Achr6P17030_001 | Banana | endoplasmic reticulum, golgi | 36.0 | 35.89 |
| TraesCS4D01G218100.3 | Wheat | mitochondrion | 31.61 | 34.16 |
| Zm00001d047881_P002 | Maize | mitochondrion | 32.6 | 34.1 |
| GSMUA_Achr6P07650_001 | Banana | golgi, plasma membrane | 35.13 | 34.04 |
| TraesCS4B01G217800.2 | Wheat | mitochondrion | 31.28 | 33.73 |
| Zm00001d013452_P002 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.75 | 33.58 |
| Os03t0259900-01 | Rice | mitochondrion | 32.93 | 33.33 |
| EER95149 | Sorghum | mitochondrion | 31.83 | 33.3 |
| TraesCS4A01G086600.5 | Wheat | mitochondrion | 31.28 | 32.95 |
| TraesCS4B01G044000.1 | Wheat | plastid | 30.95 | 31.33 |
| TraesCS4D01G041500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 30.85 | 31.22 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 30.63 | 31.0 |
| TraesCS4A01G270100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 30.41 | 30.92 |
| HORVU4Hr1G061850.1 | Barley | plastid | 31.06 | 30.36 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 20.2 | 29.63 |
| OQU91120 | Sorghum | endoplasmic reticulum, plastid | 31.5 | 27.49 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 24.7 | 26.56 |
| Zm00001d033705_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 28.1 | 25.25 |
| VIT_07s0141g00860.t01 | Wine grape | golgi | 19.21 | 22.91 |
| VIT_14s0081g00320.t01 | Wine grape | nucleus | 17.78 | 22.28 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 9.55 | 18.55 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 10.32 | 18.08 |
| VIT_05s0029g00110.t01 | Wine grape | endoplasmic reticulum, golgi | 13.94 | 15.93 |
Protein Annotations
| MapMan:20.2.4.3 | ProteinID:CCB57627 | ProteinID:CCB57627.1 | ncoils:Coil | UniProt:F6HSI7 | EMBL:FN596245 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0017022 | InterPro:GTD-bd | InterPro:IPR007656 | PFAM:PF04576 | PFscan:PS51775 | PANTHER:PTHR31448 |
| PANTHER:PTHR31448:SF24 | TMHMM:TMhelix | UniParc:UPI0002109B78 | ArrayExpress:VIT_14s0006g00920 | EnsemblPlantsGene:VIT_14s0006g00920 | EnsemblPlants:VIT_14s0006g00920.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:+:15877712..15880893
Molecular Weight (calculated)
103567.0 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.597
Length
911 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPNKFATML HMNTHKITVI LVYAVLEWLL IILLLLNSFL FYFISKFAAY FGLKPPCLWC ARVDHLFEPP AATNATQSYY HLVCEAHASE ISKLAYCWDH
101: RKLVKWEDMC NDCSSSHSGC SGKPFEISHQ MAFFSSMPHN NAAINGERDR RCCCCDHLFT TKFCPPYFLF KPSWNILEYS RKGNLIVEEM HSEIYGDDFS
201: DNCENQSEMK HNVEADVGND QVLANEQLIV SGVQSISFPY DDKEGNEDEK ADTTKITPPY SNSKDFLHPS SDDAGIQTCC RADEPLEIIN LHSKIQIHPE
301: FHRIIPFHLI DSSTTENQRS YKFTKGGLRQ HELQHHGTFH SESLIKSNEE IPWISKDATL LVTNAEKAEK TMSKELESLE MGAIEDSVAL NTGDGRNEDL
401: VDKACEQSIT SQAAQNVSTD TNDREAKAMK EPDDPTGLNH TEKAAKGESI NFAEENQQGI KLHLSLCSEA CEVEEERFSS TPTFREGLHH LQKKLLLPEK
501: KESVMENSFD GSVISEMEGS DTVFTIERLT AALEAERKAL RALYAELEEE RSASAIAANQ TMAMITRLQE EKAAMQMEAL QYQRMMEEQS EYDQEALQLL
601: NELMIKREKE KQELEKELEI HRKKVLDYES KEKMMRRRKD VGSIRSRISS ATCSNAEDSD ELSIDLNQEG KDEDSSFCGH QERNGNSTPG DATLDLDEMG
701: LECVNHLSTL EESLAEFEEE RMCILEQLKA LEEKLFTLGD DEQFFEDVEQ MEQFPEHNGK ELDKECGFGS GEVQGVSNGL PKEMSGKQYS EKKTKGSNAK
801: SLLPLFDAIH IESEEGVLEE VHVESDSARM LVSSVSQFEL EHKKLAIEEE VDHVYERLQA LEADREFMKH CISSLKKGDK GMDLLQEILQ HLRDLRTVEV
901: RVRNMGDTTL I
101: RKLVKWEDMC NDCSSSHSGC SGKPFEISHQ MAFFSSMPHN NAAINGERDR RCCCCDHLFT TKFCPPYFLF KPSWNILEYS RKGNLIVEEM HSEIYGDDFS
201: DNCENQSEMK HNVEADVGND QVLANEQLIV SGVQSISFPY DDKEGNEDEK ADTTKITPPY SNSKDFLHPS SDDAGIQTCC RADEPLEIIN LHSKIQIHPE
301: FHRIIPFHLI DSSTTENQRS YKFTKGGLRQ HELQHHGTFH SESLIKSNEE IPWISKDATL LVTNAEKAEK TMSKELESLE MGAIEDSVAL NTGDGRNEDL
401: VDKACEQSIT SQAAQNVSTD TNDREAKAMK EPDDPTGLNH TEKAAKGESI NFAEENQQGI KLHLSLCSEA CEVEEERFSS TPTFREGLHH LQKKLLLPEK
501: KESVMENSFD GSVISEMEGS DTVFTIERLT AALEAERKAL RALYAELEEE RSASAIAANQ TMAMITRLQE EKAAMQMEAL QYQRMMEEQS EYDQEALQLL
601: NELMIKREKE KQELEKELEI HRKKVLDYES KEKMMRRRKD VGSIRSRISS ATCSNAEDSD ELSIDLNQEG KDEDSSFCGH QERNGNSTPG DATLDLDEMG
701: LECVNHLSTL EESLAEFEEE RMCILEQLKA LEEKLFTLGD DEQFFEDVEQ MEQFPEHNGK ELDKECGFGS GEVQGVSNGL PKEMSGKQYS EKKTKGSNAK
801: SLLPLFDAIH IESEEGVLEE VHVESDSARM LVSSVSQFEL EHKKLAIEEE VDHVYERLQA LEADREFMKH CISSLKKGDK GMDLLQEILQ HLRDLRTVEV
901: RVRNMGDTTL I
001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
Arabidopsis Description
MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.