Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G135800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 90.54 | 90.69 |
| TraesCS1B01G153100.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 90.22 | 90.37 |
| Os10t0414800-01 | Rice | mitochondrion, nucleus, plastid, vacuole | 62.34 | 65.05 |
| KXG38537 | Sorghum | golgi, plasma membrane, plastid | 55.29 | 61.39 |
| Zm00001d032962_P003 | Maize | endoplasmic reticulum, nucleus, plasma membrane | 50.32 | 50.89 |
| HORVU4Hr1G074110.1 | Barley | golgi | 47.44 | 38.1 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 33.17 | 32.45 |
| GSMUA_Achr1P05380_001 | Banana | golgi, plasma membrane | 29.17 | 31.01 |
| VIT_07s0141g00860.t01 | Wine grape | golgi | 26.12 | 21.34 |
| HORVU3Hr1G075790.2 | Barley | golgi, mitochondrion | 29.01 | 20.57 |
| KRH19519 | Soybean | golgi | 28.04 | 20.47 |
| VIT_14s0081g00320.t01 | Wine grape | nucleus | 23.56 | 20.22 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.21 | 20.14 |
| KRG97006 | Soybean | plastid | 27.56 | 20.02 |
| KRH68762 | Soybean | golgi, plasma membrane | 27.56 | 19.91 |
| PGSC0003DMT400070777 | Potato | golgi, plasma membrane, plastid | 27.24 | 19.74 |
| KRH15931 | Soybean | nucleus | 14.26 | 19.6 |
| Solyc01g097040.2.1 | Tomato | golgi, plasma membrane, plastid | 27.88 | 19.1 |
| KRH32143 | Soybean | extracellular | 23.24 | 18.83 |
| Bra018599.1-P | Field mustard | extracellular, vacuole | 27.24 | 17.75 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 27.08 | 17.66 |
| CDX93536 | Canola | extracellular, vacuole | 27.24 | 17.63 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 20.03 | 17.58 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 20.19 | 17.48 |
| Bra018297.1-P | Field mustard | endoplasmic reticulum, extracellular | 18.91 | 17.23 |
| CDY29652 | Canola | endoplasmic reticulum | 19.87 | 17.01 |
| Bra021657.1-P | Field mustard | endoplasmic reticulum | 19.71 | 16.58 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 23.72 | 16.44 |
| AT2G30690.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 19.71 | 16.18 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 19.55 | 15.99 |
| HORVU4Hr1G061850.1 | Barley | plastid | 23.88 | 15.99 |
| Bra030742.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plastid, vacuole | 27.88 | 15.1 |
| AT1G08800.1 | Thale cress | extracellular, vacuole | 26.76 | 15.0 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 10.1 | 14.89 |
| PGSC0003DMT400080686 | Potato | endoplasmic reticulum, golgi, plastid | 26.6 | 14.42 |
| Solyc09g066140.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 26.6 | 13.89 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 17.15 | 12.63 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 8.65 | 12.3 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 8.01 | 11.29 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 7.53 | 10.98 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 4.17 | 6.28 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G035080.2 | EnsemblPlantsGene:HORVU1Hr1G035080 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0017022 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF6 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B47B4E5 | UniProt:A0A287F426 | MapMan:20.2.4.3 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:228634678..228637796
Molecular Weight (calculated)
69292.4 Da
IEP (calculated)
5.141
GRAVY (calculated)
-0.534
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKTGVRSQ DFSQRFLYTL SRALSEICVI ILLHVAATTS YVATRLAHIS RLRAPCTMCS KLDQALHGKA WFSADLVCAA HRSEMSSLAY CKSHNNLAHS
101: ADLCKRCLAA CTLSGLVDEA TSRSGSRSRQ LCSCCLEPFK KVCNTHKLYE TPDVKEPSHN VHGSDEIKQR SQVGVIEKTN PAIPAKVVPE QVSTDHSKVK
201: GSIEEVRELD ASPGTYEQST KDNGAPTNAG FTAKPAPSGS ALPSRIFVDR NSSIKNTFVG RVNLPSPRPS EIISARDNNS TTQQEVKALL TQMSSVRGLD
301: YSWTEGATSP DTMIQNDENN GTTRRPYLER NYSVLEPSDA NLGICEAEGE ISLESLKRQI DINKKSMLVL YKELEEERSA SAIAASQAMA MINRLHEEKA
401: AMQMEALQYL RMMEEQADHD HEAIQNLHDL LTEREKELLD MDAELDSFRR LLQSDQFNGG NFDDTVDNTT GYDKNVSFDV LNASDFMTST MSGFKEEKAY
501: ILESLGRLEE KLRISTYKLA SDDAKSNQEE TLLGDHIGDE STSFQQSIEG KDKDECSYSP VDNDKMSGLN DLKDEISLLD ARLKALEDDH EFLKRVVSSL
601: KGDGLQCVRD IMSHLQELRR VAAQ
101: ADLCKRCLAA CTLSGLVDEA TSRSGSRSRQ LCSCCLEPFK KVCNTHKLYE TPDVKEPSHN VHGSDEIKQR SQVGVIEKTN PAIPAKVVPE QVSTDHSKVK
201: GSIEEVRELD ASPGTYEQST KDNGAPTNAG FTAKPAPSGS ALPSRIFVDR NSSIKNTFVG RVNLPSPRPS EIISARDNNS TTQQEVKALL TQMSSVRGLD
301: YSWTEGATSP DTMIQNDENN GTTRRPYLER NYSVLEPSDA NLGICEAEGE ISLESLKRQI DINKKSMLVL YKELEEERSA SAIAASQAMA MINRLHEEKA
401: AMQMEALQYL RMMEEQADHD HEAIQNLHDL LTEREKELLD MDAELDSFRR LLQSDQFNGG NFDDTVDNTT GYDKNVSFDV LNASDFMTST MSGFKEEKAY
501: ILESLGRLEE KLRISTYKLA SDDAKSNQEE TLLGDHIGDE STSFQQSIEG KDKDECSYSP VDNDKMSGLN DLKDEISLLD ARLKALEDDH EFLKRVVSSL
601: KGDGLQCVRD IMSHLQELRR VAAQ
0001: MGSRSFTRAL ALAFNEWLLM FMLFVNSIFS YVIARFADYS ELQSPCLMCS NLDHILRRTK DLKKTHWDII CSKHKSEISS LVYCHAHGKL VDVRGMCETC
0101: LFSFATTNKS NAETYRLLVG KLGEDSHFGS KSDRSKYPNC SKLTDCTCCN QLWTPQTAAT QVAEREILPK IGLLGKIRTG KQSAPKKSVS FNHLPDVGYT
0201: ELKIHSDTES EAVFSDTEPK QESSLNHLPP VGYNEPKIGL VGDVRTGKPS TPKKSVSFNH LPDVGYTELK IHSDTESEAV FSEDECVVLK DEDHKYQIVD
0301: LQTHPIITLP YDLATDKLLN FDFPLEPFVT RNDREEVQLQ ETNWRTYSSF PVLIPVNDVP ETSEKVFKEE EINSLDNLFL TSRAMKHFAA AKVKEEPIRL
0401: QDISSTPDVK ENPANASLME ETELICLSDV TATSGAMEHS EVILKEREEL IHLQDISVTP DFKENPANAS LLEETELICL NDVTSPLRAV EHSAVLLKDK
0501: VEPIRLQDGG SLTPDFMENS ANASILEETE LICVNDVTST SRTMGHSSVV LKENEEPIRF QDSSLTPDFK ENPASTFLVE ETELICLNDV TSPSRAMEHS
0601: TVFIEEKEEL VRHQNITLTQ DFMENPANSS LREETELICL NDVTSTSEVA ETPEDVLEGI ELMSIHDISL DEVSESVTTN QTSVEISKER DTDQADITSL
0701: ESEYIVVPSP NSMPENSTDN CVSDKKEMKE TSLRISSLSE MAPRDVTSHT EAALESESSS FNSMSVAAET NQYSGELLDL ADAYNIVVGN EGHYDSNGRQ
0801: QIENWMKKDT SRVSEDLKAL LTQISASRGI EFLSPRDVSP KISVNSSDQE TKNLDHDMQL LLQKRMLERN ESNLSLEGVS VTEIEGESEG DRLKRQVDYD
0901: RKLLTGLYKE LEEERSASAV ATNQAMAMIT RLQEEKASFQ MEALQNLRMM EEQAEYDMEA IQRLNDLLVE REKLIQDLEA EIEYFRDQTP QKKNKLDVAE
1001: KVTEMDSPSE GMSNKIQSCL VGFDEERLYI TSCLEKIENR VNGKAHDDNL PAQESVSELH ERVERLKGDL YFLEQVMNSL GHGNEGVQFV KEIASHLQTL
1101: RSLSMKRQDQ TEC
0101: LFSFATTNKS NAETYRLLVG KLGEDSHFGS KSDRSKYPNC SKLTDCTCCN QLWTPQTAAT QVAEREILPK IGLLGKIRTG KQSAPKKSVS FNHLPDVGYT
0201: ELKIHSDTES EAVFSDTEPK QESSLNHLPP VGYNEPKIGL VGDVRTGKPS TPKKSVSFNH LPDVGYTELK IHSDTESEAV FSEDECVVLK DEDHKYQIVD
0301: LQTHPIITLP YDLATDKLLN FDFPLEPFVT RNDREEVQLQ ETNWRTYSSF PVLIPVNDVP ETSEKVFKEE EINSLDNLFL TSRAMKHFAA AKVKEEPIRL
0401: QDISSTPDVK ENPANASLME ETELICLSDV TATSGAMEHS EVILKEREEL IHLQDISVTP DFKENPANAS LLEETELICL NDVTSPLRAV EHSAVLLKDK
0501: VEPIRLQDGG SLTPDFMENS ANASILEETE LICVNDVTST SRTMGHSSVV LKENEEPIRF QDSSLTPDFK ENPASTFLVE ETELICLNDV TSPSRAMEHS
0601: TVFIEEKEEL VRHQNITLTQ DFMENPANSS LREETELICL NDVTSTSEVA ETPEDVLEGI ELMSIHDISL DEVSESVTTN QTSVEISKER DTDQADITSL
0701: ESEYIVVPSP NSMPENSTDN CVSDKKEMKE TSLRISSLSE MAPRDVTSHT EAALESESSS FNSMSVAAET NQYSGELLDL ADAYNIVVGN EGHYDSNGRQ
0801: QIENWMKKDT SRVSEDLKAL LTQISASRGI EFLSPRDVSP KISVNSSDQE TKNLDHDMQL LLQKRMLERN ESNLSLEGVS VTEIEGESEG DRLKRQVDYD
0901: RKLLTGLYKE LEEERSASAV ATNQAMAMIT RLQEEKASFQ MEALQNLRMM EEQAEYDMEA IQRLNDLLVE REKLIQDLEA EIEYFRDQTP QKKNKLDVAE
1001: KVTEMDSPSE GMSNKIQSCL VGFDEERLYI TSCLEKIENR VNGKAHDDNL PAQESVSELH ERVERLKGDL YFLEQVMNSL GHGNEGVQFV KEIASHLQTL
1101: RSLSMKRQDQ TEC
Arabidopsis Description
MYOB1Myosin-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HXQ7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.