Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G145300.1 | Wheat | cytosol | 71.98 | 83.16 |
| TraesCS1B01G165300.1 | Wheat | plastid | 80.87 | 74.11 |
| TraesCS1A01G147200.1 | Wheat | plastid | 80.87 | 74.11 |
| Os12t0488700-00 | Rice | cytosol | 63.55 | 55.03 |
| OQU79118 | Sorghum | plastid | 30.07 | 54.32 |
| Zm00001d023648_P003 | Maize | plastid | 57.18 | 52.95 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 33.49 | 34.75 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 23.01 | 33.33 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 26.42 | 32.49 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 25.28 | 29.6 |
| Bra009206.1-P | Field mustard | nucleus | 28.02 | 28.81 |
| Bra028728.1-P | Field mustard | nucleus | 26.65 | 28.75 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 27.56 | 26.83 |
| KRH32933 | Soybean | nucleus | 29.84 | 26.73 |
| KRH68055 | Soybean | cytosol | 28.25 | 26.5 |
| KRH71751 | Soybean | nucleus | 29.16 | 26.12 |
| AT5G06560.1 | Thale cress | nucleus | 29.84 | 25.29 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 11.62 | 25.12 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 29.61 | 25.0 |
| Bra038684.1-P | Field mustard | nucleus | 22.32 | 24.32 |
| PGSC0003DMT400072288 | Potato | plastid | 27.79 | 23.64 |
| PGSC0003DMT400022326 | Potato | nucleus | 26.65 | 23.59 |
| Bra034805.1-P | Field mustard | nucleus | 23.69 | 23.27 |
| CDY07525 | Canola | peroxisome | 4.78 | 21.88 |
| AT3G11850.2 | Thale cress | nucleus | 23.92 | 20.83 |
| KRG96316 | Soybean | cytosol | 27.11 | 20.52 |
| CDY07526 | Canola | nucleus | 13.21 | 20.14 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 17.31 | 18.36 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 18.0 | 17.83 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 15.49 | 15.89 |
| HORVU1Hr1G035080.2 | Barley | cytosol, golgi, mitochondrion, plastid | 12.3 | 8.65 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 15.72 | 8.15 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 15.95 | 7.78 |
| HORVU4Hr1G074110.1 | Barley | golgi | 13.21 | 7.46 |
| HORVU4Hr1G061850.1 | Barley | plastid | 15.26 | 7.19 |
| HORVU3Hr1G075790.2 | Barley | golgi, mitochondrion | 13.44 | 6.7 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G000300.2 | EnsemblPlantsGene:HORVU0Hr1G000300 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | UniParc:UPI000B4770C6 | UniProt:A0A287DTM5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:1458929..1460362
Molecular Weight (calculated)
44027.7 Da
IEP (calculated)
7.051
GRAVY (calculated)
-0.284
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: NAATGLPPFS LDRPAPPRQL ALSKMEKIQI QPLVEALIDV VRXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXALADL QAELDAERGA AAGAASEAMT
101: MILRLQREKA EAMMEARQFR RYAEEKMSHD AAELAALEET IAKRDASVRG LQSLSRLSVA NAASLHSSPR VSSTPRHPST PSTVGAGGYY PPLRCFSGRF
201: NDHPPTASEA DVLDMQTPRD HLARLSQRVQ MLEHRAPPTT TTTPIIRVAP GSAFPRNPRP FSDTDSLDFG DGEYFPDDDC GASDRVYTVD AIHGRGVPLV
301: VPEGSICGGT PAGSECCAGG PWAEDEEMRR LSARLQALEA DRETMRQAII SMGAEKAQVV LLKEIAQQLC KDAPPALPAV TVGHHYYKGA APPAVTVTVP
401: RPQRPMVMHR MVLKSQPTRT SFFATVVKES TPLIFLRQI
101: MILRLQREKA EAMMEARQFR RYAEEKMSHD AAELAALEET IAKRDASVRG LQSLSRLSVA NAASLHSSPR VSSTPRHPST PSTVGAGGYY PPLRCFSGRF
201: NDHPPTASEA DVLDMQTPRD HLARLSQRVQ MLEHRAPPTT TTTPIIRVAP GSAFPRNPRP FSDTDSLDFG DGEYFPDDDC GASDRVYTVD AIHGRGVPLV
301: VPEGSICGGT PAGSECCAGG PWAEDEEMRR LSARLQALEA DRETMRQAII SMGAEKAQVV LLKEIAQQLC KDAPPALPAV TVGHHYYKGA APPAVTVTVP
401: RPQRPMVMHR MVLKSQPTRT SFFATVVKES TPLIFLRQI
001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
Arabidopsis Description
MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.