Factsheet for Bra028728.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04993	Canola	nucleus	98.03	97.32
Bra009206.1-P	Field mustard	nucleus	67.57	64.4
AT5G06560.1	Thale cress	nucleus	72.73	57.14
Bra034805.1-P	Field mustard	nucleus	56.76	51.68
VIT_08s0032g00720.t01	Wine grape	plastid	59.71	46.73
Bra038684.1-P	Field mustard	nucleus	45.45	45.91
KRH68055	Soybean	cytosol	50.37	43.8
Bra014792.1-P	Field mustard	cytosol	42.01	42.96
Bra007093.1-P	Field mustard	nucleus	42.51	42.61
GSMUA_Achr8P26680_001	Banana	cytosol	29.98	40.26
GSMUA_Achr1P14210_001	Banana	cytosol	34.15	38.94
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	35.63	38.67
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	40.79	36.89
GSMUA_Achr3P15020_001	Banana	nucleus	40.54	36.59
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	42.01	35.85
KRG96316	Soybean	cytosol	46.44	32.59
OQU79118	Sorghum	plastid	19.41	32.51
TraesCS1D01G145300.1	Wheat	cytosol	29.24	31.32
TraesCS4A01G159000.1	Wheat	cytosol	33.42	30.98
TraesCS1A01G147200.1	Wheat	plastid	35.87	30.48
TraesCS1B01G165300.1	Wheat	plastid	35.87	30.48
Zm00001d023648_P003	Maize	plastid	35.38	30.38
Zm00001d033504_P001	Maize	nucleus	36.61	29.98
OQU91257	Sorghum	nucleus	37.59	29.94
Zm00001d013658_P001	Maize	nucleus	35.87	29.26
Os03t0650800-00	Rice	nucleus	35.63	29.0
Os12t0488700-00	Rice	cytosol	36.12	28.99
Bra034886.1-P	Field mustard	cytosol	9.09	28.91
TraesCS5D01G380300.1	Wheat	cytosol	28.26	28.89
KXG28744	Sorghum	cytosol	31.94	28.7
Zm00001d007503_P001	Maize	nucleus	31.2	27.85
TraesCS5B01G373100.1	Wheat	nucleus	33.91	27.6
HORVU4Hr1G041430.2	Barley	cytosol	28.26	27.19
HORVU0Hr1G000300.2	Barley	cytosol	28.75	26.65
TraesCS5A01G370700.1	Wheat	nucleus	20.64	25.23
Bra006798.1-P	Field mustard	nucleus	18.18	24.18
HORVU5Hr1G092270.4	Barley	cytosol, plastid	22.6	22.22
Bra002693.1-P	Field mustard	nucleus	19.41	21.47
Bra020409.1-P	Field mustard	nucleus	16.71	21.38
Bra002694.1-P	Field mustard	nucleus	19.16	21.2
Bra006800.1-P	Field mustard	cytosol	8.11	20.37
Bra039233.1-P	Field mustard	nucleus	15.23	19.02
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.55	18.01
Bra011226.1-P	Field mustard	cytosol	14.0	17.33
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	17.2	13.41
Bra003783.1-P	Field mustard	extracellular, plasma membrane	15.48	13.29
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	16.46	12.93
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	15.97	12.72
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	16.46	12.34
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	16.46	12.14
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	18.43	10.87
Bra016190.1-P	Field mustard	mitochondrion	18.43	8.61
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	12.29	7.3
Bra018599.1-P	Field mustard	extracellular, vacuole	16.71	7.1
Bra021657.1-P	Field mustard	endoplasmic reticulum	12.78	7.01
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	15.97	5.64

Protein Annotations

EnsemblPlants:Bra028728.1	EnsemblPlants:Bra028728.1-P	EnsemblPlantsGene:Bra028728	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576
PFscan:PS51775	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543185	UniProt:M4EIW3	MapMan:35.1

Description

AT5G06560 (E=3e-060) | unknown protein

Coordinates

chrA02:-:2350919..2352335

Molecular Weight (calculated)

46805.2 Da

IEP (calculated)

5.843

GRAVY (calculated)

-0.707

Length

407 amino acids

Sequence
(BLAST)

001: MDTLTCCDCG CEDCSSHKHD EFSNNKPRDA RDLSLSLSSS NAKVQIENEC HLLRETVASQ QESIQDLYSE LDEERNAAST AANEAMSMIL RLQREKAEVE
101: MELRQFKRFS EEKMEHDRQE LLALEDLVYK REQTIQALTF EAQAFRHRMM SYGVSEGADV DDVAINVYDY DYPPLKCSLN ENPEVEVDVE KYTLTDSSPR
201: GGDNLSSLPR QSPKRHRHFR KVSTGSSSSL LGTTNRDQRP DFSVDSPRFN GEMHDRIYTI DSVHQGDAEE KCKVDGEMNQ PDHLGDPDIV KLYARMQALE
301: ADRESMRQAI VSMRTEKAQV VLLKEIAQHL SKEVVPERRL PLRKASIVGV FSFLSVFKWI TSFVFWRKKA RRSKYMNGVQ ANNMGLEMLL EKTPRIRQWR
401: CLSSTQV

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.