Factsheet for GSMUA_Achr2P12800_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	61.11	57.65
GSMUA_Achr8P26680_001	Banana	cytosol	31.33	46.53
GSMUA_Achr1P14210_001	Banana	cytosol	36.44	45.94
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	37.11	44.53
GSMUA_Achr3P15020_001	Banana	nucleus	44.0	43.9
Bra009206.1-P	Field mustard	nucleus	41.33	43.56
KRH71751	Soybean	nucleus	45.78	42.04
KRH68055	Soybean	cytosol	43.33	41.67
VIT_08s0032g00720.t01	Wine grape	plastid	47.33	40.96
KRH32933	Soybean	nucleus	44.44	40.82
Bra028728.1-P	Field mustard	nucleus	36.89	40.79
PGSC0003DMT400022326	Potato	nucleus	42.44	38.51
Bra034805.1-P	Field mustard	nucleus	38.0	38.26
PGSC0003DMT400072288	Potato	plastid	43.78	38.18
AT5G06560.1	Thale cress	nucleus	43.33	37.64
Solyc11g045480.1.1	Tomato	mitochondrion	16.67	36.95
Bra038684.1-P	Field mustard	nucleus	31.78	35.48
CDY07525	Canola	peroxisome	7.33	34.38
AT3G11850.2	Thale cress	nucleus	36.67	32.74
KRG96316	Soybean	cytosol	41.78	32.41
CDY07526	Canola	nucleus	19.11	29.86
GSMUA_Achr10P...	Banana	nucleus	19.78	18.46
GSMUA_Achr6P06580_001	Banana	nucleus	11.78	17.73
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	17.11	13.12
GSMUA_AchrUn_...	Banana	golgi, vacuole	16.67	11.76
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	15.33	11.29
GSMUA_Achr4P17820_001	Banana	golgi	17.56	10.72
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	16.67	9.42
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	16.22	9.23
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	17.56	8.64
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	16.67	7.98

Protein Annotations

EnsemblPlants:GSMUA_Achr2P12800_001	EnsemblPlants:GSMUA_Achr2T12800_001	EnsemblPlantsGene:GSMUA_Achr2G12800_001	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI0002969A59
UniProt:M0S7H1	MapMan:35.1	:	:	:	:

Description

Putative DUF593 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G12800_001]

Coordinates

chr2:+:15142086..15146066

Molecular Weight (calculated)

50190.0 Da

IEP (calculated)

4.698

GRAVY (calculated)

-0.293

Length

450 amino acids

Sequence
(BLAST)

001: MDLETLLVPD AAAYTRLCPC ACPFCCRSPS PSWRRSIKRR LDPEASADCA APSPAGGDVA ARVEVENEVA ALREAVASQQ QSIQELLAEL DEERNAAASA
101: ASEAMSMILR LQREKAEAQM EARQFKRFAE EKMHHDQQEI LALEDLLFKR EEAVQFLTFR LQAYAHRLLS YGIDPNADHY DEAPHLEKYA SVETPQAKED
201: LEDLEQRICQ LEAYPDDISL MEKGVIEESP RPLSDSRHSL ADSHGSVSAK NLPGLTKGEE FPASADKPLD DGSGFDDMAD RVYTIDAVHG VPMVIVSEDC
301: VDTPVKEEKN GEMDGRLEGG SPDIKNLYMR LQALEADRES MRQTIISMRT EKAQLVLLRE IAQQLYREVA PESKIIKKKS STANFSIVGL LKLIVSFIVW
401: RKKASRIKYV SILIFFVPFL IQKPSDGAIP LDVTGTLLGH LITMLDCCCF

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.