Factsheet for GSMUA_Achr8P26680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P14210_001	Banana	cytosol	77.89	66.11
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	69.31	56.0
GSMUA_Achr3P15020_001	Banana	nucleus	78.55	52.77
CDY07525	Canola	peroxisome	13.53	42.71
Solyc11g045480.1.1	Tomato	mitochondrion	28.38	42.36
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	46.53	31.33
OQU79118	Sorghum	plastid	24.75	30.86
TraesCS1D01G145300.1	Wheat	cytosol	38.61	30.79
PGSC0003DMT400022326	Potato	nucleus	50.16	30.65
KRH71751	Soybean	nucleus	49.17	30.41
KRH32933	Soybean	nucleus	48.84	30.2
Bra028728.1-P	Field mustard	nucleus	40.26	29.98
Bra009206.1-P	Field mustard	nucleus	41.91	29.74
KRH68055	Soybean	cytosol	45.87	29.7
TraesCS5D01G380300.1	Wheat	cytosol	38.94	29.65
VIT_08s0032g00720.t01	Wine grape	plastid	50.83	29.62
PGSC0003DMT400072288	Potato	plastid	49.51	29.07
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	45.21	28.72
KXG28744	Sorghum	cytosol	40.92	27.37
TraesCS4A01G159000.1	Wheat	cytosol	38.94	26.88
Bra034805.1-P	Field mustard	nucleus	39.27	26.62
Zm00001d007503_P001	Maize	nucleus	39.6	26.32
AT5G06560.1	Thale cress	nucleus	44.88	26.25
TraesCS5A01G370700.1	Wheat	nucleus	28.38	25.83
Zm00001d023648_P003	Maize	plastid	40.26	25.74
Bra038684.1-P	Field mustard	nucleus	33.33	25.06
TraesCS1B01G165300.1	Wheat	plastid	38.94	24.63
TraesCS1A01G147200.1	Wheat	plastid	38.61	24.43
AT3G11850.2	Thale cress	nucleus	40.26	24.21
Os03t0650800-00	Rice	nucleus	39.93	24.2
HORVU4Hr1G041430.2	Barley	cytosol	33.33	23.88
Os12t0488700-00	Rice	cytosol	39.93	23.87
Zm00001d013658_P001	Maize	nucleus	38.94	23.65
Zm00001d033504_P001	Maize	nucleus	38.61	23.54
OQU91257	Sorghum	nucleus	39.27	23.29
TraesCS5B01G373100.1	Wheat	nucleus	38.28	23.2
HORVU0Hr1G000300.2	Barley	cytosol	33.33	23.01
KRG96316	Soybean	cytosol	43.56	22.76
HORVU5Hr1G092270.4	Barley	cytosol, plastid	31.02	22.71
CDY07526	Canola	nucleus	17.49	18.4
GSMUA_Achr6P06580_001	Banana	nucleus	17.49	17.73
GSMUA_Achr10P...	Banana	nucleus	18.81	11.83
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	16.5	8.18
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	15.18	7.84
GSMUA_AchrUn_...	Banana	golgi, vacuole	13.53	6.43
GSMUA_Achr4P17820_001	Banana	golgi	14.85	6.11
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	15.84	6.07
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	17.49	5.64
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	16.5	5.47
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	12.21	4.65

Protein Annotations

EnsemblPlants:GSMUA_Achr8P26680_001	EnsemblPlants:GSMUA_Achr8T26680_001	EnsemblPlantsGene:GSMUA_Achr8G26680_001	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI00029633DA
UniProt:M0TTX1	MapMan:35.1	:	:	:	:

Description

Putative DUF593 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26680_001]

Coordinates

chr8:-:30136935..30139838

Molecular Weight (calculated)

34182.9 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.548

Length

303 amino acids

Sequence
(BLAST)

001: MSMILRLQRE KAEAQMEARQ FKRLAEEKMA HDQQEIAALE DLLFKKDQAV QAVTCEVQAY RHRLLSYGIG MEDGDAPPSE PQTPDTATSA FAVPQFDPFP
101: RDYPPLRCTS DTAVDLDNYG SSLEFNKGEE FPSAMDGASD CGGRDDMSDR VYTVDAVHGA SEDYVSTPRE LQSRRNVVGG VQEAEMRKLC MRLQALEADR
201: ESMRQTLISM GTDKAQMVLL KEIAQQMCKE ASTEKKIVKT SPSNKRISIM SMIKGVISLV FWRRRSSRVR YTFGLSASNV GLLLLLDKSP RTRHRRFLTR
301: THG

Best Arabidopsis Sequence Match ( AT3G54740.4 )
(BLAST)

001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV

Arabidopsis Description

Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.