Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 85.59 | 68.84 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 92.49 | 61.6 |
| Os03t0650800-00 | Rice | nucleus | 62.76 | 41.8 |
| Zm00001d013658_P001 | Maize | nucleus | 62.46 | 41.68 |
| OQU91257 | Sorghum | nucleus | 63.96 | 41.68 |
| Zm00001d033504_P001 | Maize | nucleus | 60.06 | 40.24 |
| CDY07525 | Canola | peroxisome | 10.21 | 35.42 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 20.72 | 33.99 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 25.83 | 28.38 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 28.23 | 26.33 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 23.42 | 20.8 |
| Bra028728.1-P | Field mustard | nucleus | 25.23 | 20.64 |
| KRH71751 | Soybean | nucleus | 30.33 | 20.61 |
| Bra009206.1-P | Field mustard | nucleus | 26.43 | 20.61 |
| Bra034805.1-P | Field mustard | nucleus | 27.33 | 20.36 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 31.53 | 20.19 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 27.33 | 20.18 |
| KRH32933 | Soybean | nucleus | 29.43 | 20.0 |
| Bra038684.1-P | Field mustard | nucleus | 24.02 | 19.85 |
| TraesCS4A01G159000.1 | Wheat | cytosol | 26.13 | 19.82 |
| PGSC0003DMT400022326 | Potato | nucleus | 29.43 | 19.76 |
| KRH68055 | Soybean | cytosol | 27.63 | 19.66 |
| PGSC0003DMT400072288 | Potato | plastid | 29.73 | 19.19 |
| AT3G11850.2 | Thale cress | nucleus | 27.93 | 18.45 |
| TraesCS1A01G147200.1 | Wheat | plastid | 26.43 | 18.37 |
| AT5G06560.1 | Thale cress | nucleus | 28.23 | 18.15 |
| KRG96316 | Soybean | cytosol | 24.92 | 14.31 |
| CDY07526 | Canola | nucleus | 7.51 | 8.68 |
| TraesCS2A01G273300.1 | Wheat | plastid | 11.11 | 7.63 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 7.21 | 6.33 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 7.51 | 5.64 |
| TraesCS5A01G444100.1 | Wheat | plastid | 8.11 | 4.1 |
| TraesCS4A01G086600.5 | Wheat | mitochondrion | 8.71 | 3.35 |
| TraesCS4A01G270100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 8.11 | 3.01 |
| TraesCS4A01G023700.1 | Wheat | golgi, vacuole | 6.91 | 2.84 |
| TraesCS3A01G321400.1 | Wheat | golgi | 6.91 | 2.63 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G370700.1 | EnsemblPlantsGene:TraesCS5A01G370700 | ncoils:Coil | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF16 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:569989404..569992702
Molecular Weight (calculated)
36342.3 Da
IEP (calculated)
4.316
GRAVY (calculated)
-0.608
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MALDAAEGRV HGHGEGGDGF LEGEGGGEGE DDDYYPELRC YNGEYYYDDG LEGSEEDAVG ADLERRICLL EHGHDGDVLG QPSLEEEEEG EEGAHLYAEE
101: ALLEPAGQET TGFSADEVLH EETVQQRSHL CDDDELPDSP VAGYGVEEGG SDDDGSGSGS DRVYMIDKVH QGAAAPTARV LEKYEDEALE PDIKTLYMRL
201: EVLEADRESM RQALLGMRTE KAQLMLLREI AQQLAKDAAP VGTGAGSVPV VHHLPRKQAV GVADTTVRED KKTAPAGTFS KPLLFKWAIA LFCSRKKKPS
301: QSRYTFGLSS NNVGLLILLD KCPRIQKTLM RRK
101: ALLEPAGQET TGFSADEVLH EETVQQRSHL CDDDELPDSP VAGYGVEEGG SDDDGSGSGS DRVYMIDKVH QGAAAPTARV LEKYEDEALE PDIKTLYMRL
201: EVLEADRESM RQALLGMRTE KAQLMLLREI AQQLAKDAAP VGTGAGSVPV VHHLPRKQAV GVADTTVRED KKTAPAGTFS KPLLFKWAIA LFCSRKKKPS
301: QSRYTFGLSS NNVGLLILLD KCPRIQKTLM RRK
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Arabidopsis Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.