Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G370700.1 | Wheat | nucleus | 68.84 | 85.59 |
| TraesCS5D01G380300.1 | Wheat | cytosol | 75.36 | 78.39 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 79.95 | 66.2 |
| Os03t0650800-00 | Rice | nucleus | 56.76 | 47.0 |
| OQU91257 | Sorghum | nucleus | 56.04 | 45.4 |
| Zm00001d013658_P001 | Maize | nucleus | 54.59 | 45.29 |
| Zm00001d033504_P001 | Maize | nucleus | 52.42 | 43.66 |
| CDY07525 | Canola | peroxisome | 8.45 | 36.46 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 16.91 | 34.48 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 22.71 | 31.02 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 24.64 | 28.57 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 20.77 | 22.93 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 24.88 | 22.84 |
| Bra028728.1-P | Field mustard | nucleus | 22.22 | 22.6 |
| Bra009206.1-P | Field mustard | nucleus | 22.71 | 22.01 |
| Bra034805.1-P | Field mustard | nucleus | 22.95 | 21.25 |
| Bra038684.1-P | Field mustard | nucleus | 20.53 | 21.09 |
| PGSC0003DMT400022326 | Potato | nucleus | 25.12 | 20.97 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 26.33 | 20.96 |
| KRH71751 | Soybean | nucleus | 24.64 | 20.82 |
| KRH68055 | Soybean | cytosol | 23.43 | 20.73 |
| KRH32933 | Soybean | nucleus | 23.91 | 20.2 |
| PGSC0003DMT400072288 | Potato | plastid | 24.64 | 19.77 |
| AT3G11850.2 | Thale cress | nucleus | 23.91 | 19.64 |
| AT5G06560.1 | Thale cress | nucleus | 24.4 | 19.5 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 18.6 | 18.2 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 18.36 | 17.31 |
| KRG96316 | Soybean | cytosol | 21.01 | 15.0 |
| CDY07526 | Canola | nucleus | 7.0 | 10.07 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 9.42 | 8.8 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 7.49 | 7.24 |
| HORVU1Hr1G035080.2 | Barley | cytosol, golgi, mitochondrion, plastid | 6.28 | 4.17 |
| HORVU4Hr1G061850.1 | Barley | plastid | 9.18 | 4.08 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 7.97 | 3.9 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 8.21 | 3.78 |
| HORVU4Hr1G074110.1 | Barley | golgi | 6.52 | 3.47 |
| HORVU3Hr1G075790.2 | Barley | golgi, mitochondrion | 7.0 | 3.3 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G092270.4 | EnsemblPlantsGene:HORVU5Hr1G092270 | ncoils:Coil | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF16 | SEG:seg |
| UniParc:UPI000B47399E | UniProt:A0A287S8V5 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:587967840..587971327
Molecular Weight (calculated)
42823.8 Da
IEP (calculated)
4.711
GRAVY (calculated)
-0.740
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: GHGHDAAPAA GEGRGADGAA PVPPLRRRED GPRRRRDRPP PRPRRPXXXX XXXXXXXXXX XXXXXXXXXX XARARSRLHA YQQTCLRLGI PLPDADDSEG
101: QGHEDGFLEG DYEDADYYPE LRCYNGEYYY DDGQEGSEED AVGVDLERRI CLLEHDQDGD GVGQLSLEED EGAHLYADEA LLEPAGQETS GFSADEVLHE
201: ETVEQRSHPC DDDELPESPI AEYGVQEGGS DDDGSGSGSG SDRVYMIDKV HQGASAPTAR VLEKYEDEAL EPDIKTLYMR LEALEADRES MRQALMGMRT
301: EKAQLMLLRE IAQQLAKDAA PVGTGVGFVP AVHHLPRKQA VGVADTRVGE DKKTAPGGTF SKPVLFKWAI ALFCSRKKKP SQSRYTFGLS SNNVGLLILL
401: DKCPRIQKTL MRRK
101: QGHEDGFLEG DYEDADYYPE LRCYNGEYYY DDGQEGSEED AVGVDLERRI CLLEHDQDGD GVGQLSLEED EGAHLYADEA LLEPAGQETS GFSADEVLHE
201: ETVEQRSHPC DDDELPESPI AEYGVQEGGS DDDGSGSGSG SDRVYMIDKV HQGASAPTAR VLEKYEDEAL EPDIKTLYMR LEALEADRES MRQALMGMRT
301: EKAQLMLLRE IAQQLAKDAA PVGTGVGFVP AVHHLPRKQA VGVADTRVGE DKKTAPGGTF SKPVLFKWAI ALFCSRKKKP SQSRYTFGLS SNNVGLLILL
401: DKCPRIQKTL MRRK
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Arabidopsis Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.