Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009206.1-P | Field mustard | nucleus | 98.83 | 98.83 |
| CDX98935 | Canola | nucleus | 89.93 | 94.12 |
| CDY14078 | Canola | nucleus | 62.76 | 69.43 |
| CDY04993 | Canola | nucleus | 64.64 | 67.32 |
| AT5G06560.1 | Thale cress | nucleus | 77.05 | 63.51 |
| CDY08489 | Canola | nucleus | 53.63 | 59.17 |
| CDY01064 | Canola | nucleus | 59.25 | 56.73 |
| CDY67532 | Canola | nucleus | 54.33 | 55.64 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 62.76 | 51.54 |
| KRH68055 | Soybean | cytosol | 53.4 | 48.72 |
| CDY07525 | Canola | peroxisome | 10.77 | 47.92 |
| CDX76130 | Canola | cytosol | 40.28 | 43.22 |
| CDX67607 | Canola | peroxisome | 41.22 | 41.9 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 37.0 | 41.69 |
| CDY70407 | Canola | peroxisome | 35.83 | 41.46 |
| CDX78259 | Canola | nucleus | 39.11 | 41.13 |
| CDX73453 | Canola | nucleus | 39.11 | 40.34 |
| KRG96316 | Soybean | cytosol | 49.41 | 36.38 |
| CDY07526 | Canola | nucleus | 23.65 | 35.07 |
| CDX88641 | Canola | nucleus | 6.09 | 21.31 |
| CDX68698 | Canola | cytosol | 14.05 | 20.41 |
| CDY28219 | Canola | cytosol | 14.05 | 20.41 |
| CDY50792 | Canola | nucleus | 17.33 | 20.11 |
| CDY02772 | Canola | nucleus | 17.1 | 19.95 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.18 | 19.92 |
| CDY51277 | Canola | nucleus | 17.1 | 19.84 |
| CDY32744 | Canola | nucleus | 16.86 | 19.67 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.94 | 19.54 |
| CDY34794 | Canola | nucleus | 14.75 | 19.33 |
| CDX76832 | Canola | nucleus | 14.52 | 19.25 |
| CDY09477 | Canola | nucleus | 7.96 | 18.28 |
| CDX88643 | Canola | nucleus | 9.6 | 17.23 |
| CDX72271 | Canola | nucleus | 15.46 | 17.1 |
| CDY13389 | Canola | nucleus | 15.46 | 16.42 |
| CDY11846 | Canola | nucleus | 9.13 | 16.39 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 16.63 | 13.63 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 16.63 | 13.63 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 16.16 | 13.32 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 16.16 | 13.24 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 16.63 | 12.84 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.75 | 12.78 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 20.14 | 12.67 |
| CDY68842 | Canola | vacuole | 16.63 | 12.61 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.52 | 12.58 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 20.14 | 12.57 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 14.99 | 12.52 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 14.52 | 12.42 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 15.22 | 11.99 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 15.22 | 11.8 |
| CDX96274 | Canola | mitochondrion | 19.44 | 11.28 |
| CDY11550 | Canola | mitochondrion | 19.44 | 10.4 |
| CDY31127 | Canola | cytosol | 14.52 | 9.54 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.69 | 7.67 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 12.65 | 7.59 |
| CDY29652 | Canola | endoplasmic reticulum | 12.88 | 7.54 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 12.65 | 7.49 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 16.16 | 7.21 |
| CDX93536 | Canola | extracellular, vacuole | 15.93 | 7.05 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 12.41 | 6.95 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.94 | 2.02 |
Protein Annotations
| EnsemblPlants:CDX70091 | EnsemblPlantsGene:GSBRNA2T00136198001 | GO:A0A078BZI0 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX70091 | ProteinID:CDX70091.1 |
| TMHMM:TMhelix | UniParc:UPI0004EE155B | MapMan:35.1 | : | : | : |
Description
BnaA10g24400D
Coordinates
chrLK031790:+:3059850..3061915
Molecular Weight (calculated)
48956.4 Da
IEP (calculated)
4.623
GRAVY (calculated)
-0.788
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLVRCCDCG CDCSLNASWI RSVKRKHDEL ESYKPELDLD SSSSNAKVQI ENECELLRET VTSQQESIQE LYAELDEERN AASTAANEAM SMILKLQRDK
101: AEIQMELRQF KRFAEEKMEH DQQELLALED LVYKREQTIQ ALACEAQGYK HRMMSYGVDE SEFDGERNEF EYELPGYDYP PLKCSLNENP DLEADVEDVE
201: KYALTDSSPH GREDLKSLEQ RISQMESGDV SGGGRTYLEK EVVGQSPSSS RDQGPDLSET GDNEMDDRVY TIDSIHHSVS QSDVSEQKFK DDGCGDKLNQ
301: PDDHSDPGIT KLYARLQALE ADRESMRQAI VSMRTEKAQM VLLKEIAQHL SKDMVPERRL PLQKASAVGA FSFISLFKWI TSFLFWRKRA RRSKYMNGVQ
401: GSNMGLQMLL EKTPRIRQWR CLSRTQV
101: AEIQMELRQF KRFAEEKMEH DQQELLALED LVYKREQTIQ ALACEAQGYK HRMMSYGVDE SEFDGERNEF EYELPGYDYP PLKCSLNENP DLEADVEDVE
201: KYALTDSSPH GREDLKSLEQ RISQMESGDV SGGGRTYLEK EVVGQSPSSS RDQGPDLSET GDNEMDDRVY TIDSIHHSVS QSDVSEQKFK DDGCGDKLNQ
301: PDDHSDPGIT KLYARLQALE ADRESMRQAI VSMRTEKAQM VLLKEIAQHL SKDMVPERRL PLQKASAVGA FSFISLFKWI TSFLFWRKRA RRSKYMNGVQ
401: GSNMGLQMLL EKTPRIRQWR CLSRTQV
001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
Arabidopsis Description
MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.