Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07525 | Canola | peroxisome | 24.39 | 93.75 |
| CDX67607 | Canola | peroxisome | 87.8 | 77.14 |
| CDY07526 | Canola | nucleus | 56.37 | 72.22 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 81.84 | 68.95 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 68.29 | 66.49 |
| CDX78259 | Canola | nucleus | 72.09 | 65.52 |
| CDX76130 | Canola | cytosol | 70.46 | 65.33 |
| CDX73453 | Canola | nucleus | 72.9 | 64.98 |
| CDY14078 | Canola | nucleus | 40.92 | 39.12 |
| CDY08489 | Canola | nucleus | 38.48 | 36.69 |
| CDY04993 | Canola | nucleus | 40.65 | 36.59 |
| CDX70091 | Canola | nucleus | 41.46 | 35.83 |
| CDX98935 | Canola | nucleus | 39.3 | 35.54 |
| CDY01064 | Canola | nucleus | 42.28 | 34.98 |
| CDY67532 | Canola | nucleus | 36.04 | 31.89 |
| CDX88641 | Canola | nucleus | 6.5 | 19.67 |
| CDY47332 | Canola | extracellular, plasma membrane | 13.01 | 18.39 |
| CDY01114 | Canola | extracellular, plasma membrane | 13.01 | 18.39 |
| CDX68698 | Canola | cytosol | 12.74 | 15.99 |
| CDX88643 | Canola | nucleus | 10.3 | 15.97 |
| CDY09477 | Canola | nucleus | 7.86 | 15.59 |
| CDY11846 | Canola | nucleus | 10.03 | 15.55 |
| CDY28219 | Canola | cytosol | 12.2 | 15.31 |
| CDY50792 | Canola | nucleus | 15.18 | 15.22 |
| CDY51277 | Canola | nucleus | 14.63 | 14.67 |
| CDX76832 | Canola | nucleus | 12.74 | 14.6 |
| CDY02772 | Canola | nucleus | 14.36 | 14.48 |
| CDY34794 | Canola | nucleus | 12.74 | 14.42 |
| CDY32744 | Canola | nucleus | 14.09 | 14.21 |
| CDX72271 | Canola | nucleus | 14.09 | 13.47 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 18.43 | 12.3 |
| CDY13389 | Canola | nucleus | 13.28 | 12.19 |
| CDY68842 | Canola | vacuole | 18.16 | 11.9 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 16.53 | 11.71 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 15.18 | 11.36 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 15.18 | 11.36 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 15.99 | 11.32 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 15.45 | 11.0 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 15.45 | 10.94 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 15.72 | 10.7 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 14.36 | 10.62 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 14.36 | 10.37 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 15.18 | 10.16 |
| CDX96274 | Canola | mitochondrion | 19.24 | 9.65 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 16.8 | 9.13 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 16.53 | 8.92 |
| CDY11550 | Canola | mitochondrion | 19.24 | 8.9 |
| CDY31127 | Canola | cytosol | 15.45 | 8.77 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 13.28 | 6.89 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.26 | 6.86 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 13.28 | 6.8 |
| CDY29652 | Canola | endoplasmic reticulum | 13.01 | 6.58 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 15.99 | 6.17 |
| CDX93536 | Canola | extracellular, vacuole | 15.99 | 6.12 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 12.2 | 5.9 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.81 | 1.52 |
Protein Annotations
| EnsemblPlants:CDY70407 | EnsemblPlantsGene:GSBRNA2T00003163001 | InterPro:GTD-bd | InterPro:IPR007656 | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 |
| PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY70407 | ProteinID:CDY70407.1 | SEG:seg | UniParc:UPI0004EDF4EB |
| UniProt:A0A078JXP7 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g51890DBnaC05g51890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXP7]
Coordinates
chrLK042007:-:1214..2628
Molecular Weight (calculated)
41605.0 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.362
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLAMDSEQS FPSREVVKCC DFVCEYSLGA CSSDPCTRTV KRKFNQEGNL MLLLSRGSSD SSSTAKLLVE NECAALLEDL SSQRKIVKEL HLELEEGRYA
101: AASAANETMS MILRLQREKA EIQMEARQFK VFAKEKMTHD QEKLKVMKEL LYEKEQAIEA LSYELDSSTV GIDVYPCEYT LKCSVDDENP SGPDGNVEVV
201: EKVMVGQSPY YDPNSPLEAA KEIKGTDSPM SCSSDSVYTI DSVHVGVSEQ GVNEPDIEKL YTRLQALEAQ LKHTIVSMRT DKAQLVLLKE IAKETVTTKR
301: RHLVSKMPSF KAFCVVTVLK WIVSFVSWRR KAKQNKYVYN LSANNMGMLM ILGEGSRTRR WNCLTSSHV
101: AASAANETMS MILRLQREKA EIQMEARQFK VFAKEKMTHD QEKLKVMKEL LYEKEQAIEA LSYELDSSTV GIDVYPCEYT LKCSVDDENP SGPDGNVEVV
201: EKVMVGQSPY YDPNSPLEAA KEIKGTDSPM SCSSDSVYTI DSVHVGVSEQ GVNEPDIEKL YTRLQALEAQ LKHTIVSMRT DKAQLVLLKE IAKETVTTKR
301: RHLVSKMPSF KAFCVVTVLK WIVSFVSWRR KAKQNKYVYN LSANNMGMLM ILGEGSRTRR WNCLTSSHV
001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.