Factsheet for Os08t0442350-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G282800.1	Wheat	nucleus	53.41	61.01
TraesCS7B01G199800.1	Wheat	nucleus	53.82	60.5
TraesCS7A01G285400.1	Wheat	nucleus	53.21	59.82
OQU80548	Sorghum	nucleus	55.42	52.27
Zm00001d032145_P001	Maize	nucleus	47.99	38.61
CDX68698	Canola	cytosol	16.27	27.55
CDY28219	Canola	cytosol	15.86	26.87
AT4G30830.1	Thale cress	nucleus	18.88	25.9
CDY34794	Canola	nucleus	16.87	25.77
CDX76832	Canola	nucleus	16.47	25.47
CDY51277	Canola	nucleus	18.67	25.27
Bra002693.1-P	Field mustard	nucleus	18.67	25.27
CDY50792	Canola	nucleus	18.47	25.0
Bra002694.1-P	Field mustard	nucleus	18.47	25.0
Bra039233.1-P	Field mustard	nucleus	16.27	24.85
Bra011226.1-P	Field mustard	cytosol	16.27	24.62
Bra006798.1-P	Field mustard	nucleus	15.06	24.51
KRH72337	Soybean	nucleus	22.89	24.31
KRH03013	Soybean	nucleus	22.89	24.05
Bra020409.1-P	Field mustard	nucleus	15.26	23.9
KRH37764	Soybean	nucleus	21.89	23.8
AT5G57830.1	Thale cress	nucleus	18.47	23.77
CDX72271	Canola	nucleus	18.27	23.58
KRH12784	Soybean	nucleus	21.29	23.25
CDY02772	Canola	nucleus	17.07	23.22
CDY32744	Canola	nucleus	17.07	23.22
AT2G24140.2	Thale cress	nucleus	15.06	23.15
CDX88641	Canola	nucleus	5.62	22.95
VIT_11s0037g00610.t01	Wine grape	nucleus	21.29	22.6
CDY11846	Canola	nucleus	10.64	22.27
PGSC0003DMT400023950	Potato	nucleus	19.88	22.25
Solyc07g005910.2.1	Tomato	nucleus	19.88	21.85
CDX88643	Canola	nucleus	10.44	21.85
PGSC0003DMT400028965	Potato	nucleus	19.68	21.63
Bra006800.1-P	Field mustard	cytosol	7.03	21.6
KRH63109	Soybean	nucleus	19.68	21.26
CDY13389	Canola	nucleus	17.07	21.14
GSMUA_Achr10P...	Banana	nucleus	20.28	20.95
KRH55008	Soybean	cytosol	6.43	19.88
Os08t0269000-01	Rice	cytosol, golgi, nucleus	11.24	19.31
Solyc11g020850.1.1	Tomato	nucleus	19.28	18.29
Os03t0708700-00	Rice	cytosol, nucleus	11.85	13.5
Os12t0488700-00	Rice	cytosol	13.25	13.02
Os03t0650800-00	Rice	nucleus	12.85	12.8
Solyc12g009900.1.1	Tomato	cytosol	15.66	12.24
PGSC0003DMT400020469	Potato	cytosol	15.66	11.24
Os10t0414800-01	Rice	mitochondrion, nucleus, plastid, vacuole	9.64	8.03
Os03t0799200-01	Rice	golgi, vacuole	10.64	7.29
Os03t0164800-00	Rice	golgi, mitochondrion	10.44	7.14
Os03t0259900-01	Rice	mitochondrion	12.05	6.67
CDY31127	Canola	cytosol	8.23	6.31
CDY31126	Canola	endoplasmic reticulum, mitochondrion, plastid, vacuole	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:4345696	EMBL:AK071128	EMBL:AK071719	ProteinID:BAD09925.1	ProteinID:BAD10029.1
ProteinID:BAH94328.1	ProteinID:BAT05641.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:GTD-bd	InterPro:IPR007656	EnsemblPlantsGene:Os08g0442350	EnsemblPlants:Os08t0442350-01
PFAM:PF04576	PFscan:PS51775	PANTHER:PTHR31422	PANTHER:PTHR31422:SF1	UniProt:Q6Z8S0	UniParc:UPI000023AF7A
RefSeq:XP_015648063.1	SEG:seg	:	:	:	:

Description

Hypothetical conserved gene. (Os08t0442350-01)

Coordinates

chr8:+:21555138..21558585

Molecular Weight (calculated)

56295.8 Da

IEP (calculated)

5.080

GRAVY (calculated)

-0.844

Length

498 amino acids

Sequence
(BLAST)

001: MAETEDTQLQ KAIFAQYIMM KKLFMELEEE REASATSASA ALSMIRKLQK EKEEQRMEAW QYKRIAEEKI SHSDKALEIL QEVLQQKELE NFYLRNQLLV
101: YKHKLLDVGI DECDIADETI TNNIPLFESK TVENLCRSIK RNFSLPTLQM KKLFAEKDTD RNVESTKSRL GGFVCNLSED ELKHISGNAS DFKALEVQKS
201: LLTDGDATEE HGEEPNPPSS DLSQQPHLLE ESSCSSSLLS NHRDTSSERA IQVGENAEDT RHGDQLKQSH SGIGKEEVQS HPLEESSSCS SFSTSSNHRD
301: ICSEREIQVG RNAEDAPHGD QTKESHSGIE AEEVAVHPIS DIVDTIKIQE RSQGVEESSC TANEIITKES ELSPKDVPKE RRPQALSKLS ATRKVGSMNN
401: LYRNVHVITD KSSTPRGKNS TPRAGTERTR SRLKRVQSEK MVEMNDTRKN KEQIIMLKEV YEQLNMIESH MRPSTSQETP RNDQSLESVL EAALSFSL

Best Arabidopsis Sequence Match ( AT3G54740.5 )
(BLAST)

001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV

Arabidopsis Description

Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.