Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028965 | Potato | nucleus | 87.42 | 85.87 |
| Solyc11g020850.1.1 | Tomato | nucleus | 94.38 | 80.0 |
| CDX88641 | Canola | nucleus | 11.91 | 43.44 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 45.62 | 43.28 |
| Bra006798.1-P | Field mustard | nucleus | 28.31 | 41.18 |
| CDY50792 | Canola | nucleus | 32.58 | 39.4 |
| CDY32744 | Canola | nucleus | 32.13 | 39.07 |
| CDY51277 | Canola | nucleus | 32.13 | 38.86 |
| AT5G57830.1 | Thale cress | nucleus | 33.71 | 38.76 |
| Bra002693.1-P | Field mustard | nucleus | 31.91 | 38.59 |
| CDY02772 | Canola | nucleus | 31.69 | 38.52 |
| Bra020409.1-P | Field mustard | nucleus | 27.42 | 38.36 |
| Bra002694.1-P | Field mustard | nucleus | 31.69 | 38.32 |
| Bra006800.1-P | Field mustard | cytosol | 13.71 | 37.65 |
| KRH63109 | Soybean | nucleus | 36.85 | 35.57 |
| CDX88643 | Canola | nucleus | 18.88 | 35.29 |
| CDY11846 | Canola | nucleus | 18.88 | 35.29 |
| KRH72337 | Soybean | nucleus | 36.85 | 34.97 |
| KRH37764 | Soybean | nucleus | 35.73 | 34.72 |
| KRH12784 | Soybean | nucleus | 35.28 | 34.43 |
| KRH03013 | Soybean | nucleus | 36.63 | 34.39 |
| CDY28219 | Canola | cytosol | 21.57 | 32.65 |
| CDX68698 | Canola | cytosol | 21.57 | 32.65 |
| KRH55008 | Soybean | cytosol | 11.24 | 31.06 |
| Bra039233.1-P | Field mustard | nucleus | 22.25 | 30.37 |
| CDX76832 | Canola | nucleus | 21.8 | 30.12 |
| CDY34794 | Canola | nucleus | 22.02 | 30.06 |
| AT4G30830.1 | Thale cress | nucleus | 23.6 | 28.93 |
| CDX72271 | Canola | nucleus | 24.94 | 28.76 |
| Bra011226.1-P | Field mustard | cytosol | 21.12 | 28.57 |
| AT2G24140.2 | Thale cress | nucleus | 20.22 | 27.78 |
| CDY13389 | Canola | nucleus | 23.82 | 26.37 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 14.83 | 22.76 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 18.65 | 21.9 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 18.65 | 21.9 |
| GSMUA_Achr10P... | Banana | nucleus | 23.37 | 21.58 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 18.2 | 21.49 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 20.45 | 20.87 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 20.45 | 20.54 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 20.45 | 20.54 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 19.55 | 20.33 |
| Os08t0442350-01 | Rice | nucleus | 22.25 | 19.88 |
| Zm00001d024102_P002 | Maize | nucleus | 15.73 | 19.77 |
| OQU80230 | Sorghum | cytosol | 17.53 | 19.5 |
| PGSC0003DMT400072288 | Potato | plastid | 21.8 | 18.8 |
| PGSC0003DMT400022326 | Potato | nucleus | 20.67 | 18.55 |
| OQU80548 | Sorghum | nucleus | 21.35 | 17.99 |
| PGSC0003DMT400020469 | Potato | cytosol | 24.94 | 15.99 |
| Zm00001d032145_P001 | Maize | nucleus | 21.57 | 15.51 |
| PGSC0003DMT400011603 | Potato | nucleus | 15.96 | 13.92 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 13.71 | 11.78 |
| PGSC0003DMT400062848 | Potato | golgi | 14.83 | 11.02 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 14.38 | 10.7 |
| PGSC0003DMT400075922 | Potato | endoplasmic reticulum, golgi | 16.4 | 8.51 |
| PGSC0003DMT400070777 | Potato | golgi, plasma membrane, plastid | 15.51 | 8.01 |
| CDY31127 | Canola | cytosol | 10.34 | 7.08 |
| PGSC0003DMT400080686 | Potato | endoplasmic reticulum, golgi, plastid | 14.83 | 5.73 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.22 | 0.51 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400023950 | EnsemblPlantsGene:PGSC0003DMG400009262 | EntrezGene:102578440 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31422 | PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | PGSC:PGSC0003DMG400009262 | RefSeq:XP_006350346.1 |
| SEG:seg | UniParc:UPI00029538B5 | UniProt:M1AJ73 | MapMan:35.1 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400009262]
Coordinates
chr11:+:14188338..14189675
Molecular Weight (calculated)
50402.5 Da
IEP (calculated)
5.087
GRAVY (calculated)
-0.736
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESYMSQLD VASLKETLCA QQQLLQKLYN ELDEEREASS SAASEALSMI MRLQGEKAAV KMEAEQYKRL AEEKMCHAEE SLDIFEDLFN QKEMEIAALE
101: YQVQAYRYKL LSTGCVDPGV GEFKYPDNLL QRNETLAGEM NLQALGRRNS APHFPLKFPK KGAMEIGDSS FERDSNSKTV EEYTGQEMNE QQSDTEKKTD
201: ISRTESINSC WQQIRKLDDR VKEITGVSYV NLRSETRSPS PLSQRSIKIS KSENEMYQPK LHVSKSETGT PSDSGCSPNV LDVFEVPRAE KDTVDIGLPP
301: KHDRKMVLHN DERLERPDSA QQVAVKSSVK DEAELLKKYF VSAQREKKLR RASEAASIAC HLAISRPTIS ISGTNELHLH NRTSEIGEVG REATRQEMAQ
401: EELKLLHEIK EQLNLMHSEI QSLKTDKLPS SDEPSLLPLS EVHFI
101: YQVQAYRYKL LSTGCVDPGV GEFKYPDNLL QRNETLAGEM NLQALGRRNS APHFPLKFPK KGAMEIGDSS FERDSNSKTV EEYTGQEMNE QQSDTEKKTD
201: ISRTESINSC WQQIRKLDDR VKEITGVSYV NLRSETRSPS PLSQRSIKIS KSENEMYQPK LHVSKSETGT PSDSGCSPNV LDVFEVPRAE KDTVDIGLPP
301: KHDRKMVLHN DERLERPDSA QQVAVKSSVK DEAELLKKYF VSAQREKKLR RASEAASIAC HLAISRPTIS ISGTNELHLH NRTSEIGEVG REATRQEMAQ
401: EELKLLHEIK EQLNLMHSEI QSLKTDKLPS SDEPSLLPLS EVHFI
001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.