Factsheet for TraesCS2B01G232300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	97.41	97.56
TraesCS2A01G204700.1	Wheat	cytosol, plastid	96.62	97.31
Os07t0562800-01	Rice	plasma membrane	79.72	80.99
EER99532	Sorghum	cytosol	75.79	77.87
Zm00001d006593_P003	Maize	cytosol	74.84	76.71
Zm00001d021785_P002	Maize	cytosol, plastid	69.89	74.83
KRH13051	Soybean	cytosol	15.09	71.64
VIT_19s0014g03640.t01	Wine grape	cytosol	54.72	58.15
KRH22163	Soybean	cytosol	53.62	57.02
KRH27175	Soybean	cytosol	52.99	56.31
AT5G54280.2	Thale cress	cytosol	52.04	54.26
CDY52239	Canola	cytosol	51.02	54.22
Bra022708.1-P	Field mustard	cytosol	51.57	54.17
CDY28777	Canola	cytosol	50.86	53.96
TraesCS1B01G179500.2	Wheat	mitochondrion	50.39	53.69
CDY14319	Canola	cytosol, plastid	50.71	53.53
CDY18321	Canola	cytosol	50.79	53.52
Bra002998.1-P	Field mustard	cytosol, plastid	50.63	53.44
KRH55425	Soybean	cytosol	48.98	53.07
KRH26031	Soybean	cytosol	48.9	52.71
Solyc07g063590.2.1	Tomato	cytosol	49.06	52.53
AT4G27370.2	Thale cress	cytosol	46.38	51.94
GSMUA_Achr8P03790_001	Banana	cytosol	54.8	51.48
Solyc10g006820.2.1	Tomato	cytosol	47.96	50.71
PGSC0003DMT400049643	Potato	cytosol	23.43	50.34
Bra031394.1-P	Field mustard	cytosol	25.24	47.49
Bra026355.1-P	Field mustard	cytosol	43.79	44.77
TraesCS6B01G367000.1	Wheat	cytosol	30.58	25.99
TraesCS3B01G239700.1	Wheat	cytosol, golgi	31.05	25.83
TraesCS6B01G431400.1	Wheat	cytosol	30.58	25.76
TraesCS5B01G391400.2	Wheat	cytosol	30.58	24.97
TraesCS5B01G566200.1	Wheat	cytosol	29.01	24.82
TraesCS1B01G183200.1	Wheat	cytosol	29.32	24.7
TraesCS7B01G094100.1	Wheat	cytosol	29.72	24.67
TraesCS1B01G375000.1	Wheat	cytosol	29.8	17.69
TraesCS3B01G277500.1	Wheat	cytosol	29.72	15.83
TraesCS3B01G070600.1	Wheat	cytosol	5.27	8.74

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009
InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N
InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF02736
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF689
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2B01G232300	EnsemblPlants:TraesCS2B01G232300.1	TIGR:cd01383
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:229853128..229862488

Molecular Weight (calculated)

144387.0 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.557

Length

1272 amino acids

Sequence
(BLAST)

0001: MEKFLASTAF CSAVMAPVPA APKSSLEVLL ETIKKRDERP KDEPPALPAR PTCRGRLPRA RRSPTPPRVH LEDGVAEGAV ADTDKKPEAV ADTDKKPEAV
0101: NENKPEIEKE NTPEVKKEIG GQEAKEGKAV NGRIFGAKRK LCSVEVELLD ESPYVENLHE ERKDAMACKE PPSPYFSSAR SKRNGKPVFT DSMDYVLQKK
0201: LRVWCSASDE KWELGQIQSI SGDDVEIHLV NGEVLTLPPE RLLPANPDIL DGVDDLIQMS YLNEPSVLYN LQYRYSRDLI YTKAGPVLIA INPLKEVPLY
0301: GKDFIRKYRQ KLTNDPHVYA IADIAFNEML RDGINQSIII SGESGAGKTE TAKIAMQYLA ALGGANGMES EVLQTNVILE ALGNAKTSRN DNSSRFGKLT
0401: EMHFSETGKI CGAKIQTFLL EKSRVVRRAS GERSYHIFYQ LCSGASPLHR KKLLLRDANY YNYLKQSACL RIDGVDDAKR FSSLLGALDI VQISGENQME
0501: LFSMLAVVLW LGNISFSVID NESHVEVDSN EGLVNAAKLL GCSVPQLVIA LSTRKIQAGK ENIVQRLTLT QAIDARDALA KSIYAHLFDW IVEQINDSLG
0601: TGRQRTRRSI SILDIYGFES FNKNGFEQFC INYANERLQQ HFNRHLFKLE QEEYLDDGID WASVEFVDNT DCLSLFEKRP LGLLSLLDEE STFPKATDLS
0701: FANKLKQHLS GNPGFKGEQD GAFKICHYAG EVSYDTTGFL EKNRDPLHSE SIQLLSSCKS DLPKDFASVM IADSQNKSTL SRHLFVDSQK QSVVNKFKAQ
0801: LFKLMQQLEN TSPHFIRCIQ PNNKQRPRQF EHDLVLHQLK CCGVFEVVRI SRAGYPTRMT HQQFAERYGF LLSHSVASQN PLSISVAVLQ QFSIPPEMYQ
0901: VGYTKLFLRT GQVAALENAK NRMFHGALRI QRNFRGLHTR REYHTLKKGA TALQSFVRGE KARFRFDYLF KRWRAAVLIQ KYTRRRLAAT MFTDQLKNIV
1001: VLQSVIRGCL ARKKFNCLQE EKESKVINSK VKRDVRNNIS QPRLCHEMNG EYPRQPVVTE LEERVSKAEA LLRDKEEENA MLKQQLEQYE NKWSEYETKM
1101: KVMEEAWKKQ LSSLQLSLVA AKKSLAADDM VTRAARTDTT PTHAQYDSED TMSTGTHTPE GTELKYQNHN PEPRVVTGNS DRRINAVNHL AKEFEDRRQV
1201: FDDDAGFLVA VKSGQIGSNM NPDDELRKLK DRFATWKKDY KSRLKETKVN LQKVGSHDEK SRKRWWGKKS SK

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.