Factsheet for AT5G54280.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52239	Canola	cytosol	88.61	90.31
CDY28777	Canola	cytosol	88.61	90.16
CDY14319	Canola	cytosol, plastid	88.77	89.88
Bra002998.1-P	Field mustard	cytosol, plastid	88.69	89.79
Bra022708.1-P	Field mustard	cytosol	89.1	89.76
CDY18321	Canola	cytosol	88.69	89.64
KRH13051	Soybean	cytosol	16.39	74.63
AT4G27370.2	Thale cress	cytosol	64.59	69.37
KRH22163	Soybean	cytosol	63.03	64.3
KRH27175	Soybean	cytosol	63.03	64.24
VIT_19s0014g03640.t01	Wine grape	cytosol	62.62	63.83
KRH55425	Soybean	cytosol	58.44	60.73
KRH26031	Soybean	cytosol	58.28	60.25
Solyc07g063590.2.1	Tomato	cytosol	55.66	57.15
PGSC0003DMT400049643	Potato	cytosol	26.48	54.56
EER99532	Sorghum	cytosol	55.33	54.52
Solyc10g006820.2.1	Tomato	cytosol	53.61	54.36
Zm00001d006593_P003	Maize	cytosol	55.08	54.15
AT1G50360.1	Thale cress	cytosol	50.9	53.86
Os07t0562800-01	Rice	plasma membrane	54.92	53.51
TraesCS2A01G204700.1	Wheat	cytosol, plastid	54.67	52.81
AT3G19960.2	Thale cress	cytosol, plastid	50.66	52.55
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	54.34	52.2
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	54.26	52.04
Zm00001d021785_P002	Maize	cytosol, plastid	49.92	51.26
GSMUA_Achr8P03790_001	Banana	cytosol	54.02	48.67
AT3G58160.1	Thale cress	cytosol	27.87	27.38
AT1G17580.1	Thale cress	cytosol	31.97	25.66
AT1G54560.1	Thale cress	cytosol	31.89	25.44
AT4G33200.4	Thale cress	cytosol	31.56	25.28
AT5G20490.2	Thale cress	cytosol	31.56	25.15
AT1G04160.1	Thale cress	cytosol	30.9	25.13
AT1G08730.1	Thale cress	endoplasmic reticulum	31.56	25.03
AT2G20290.1	Thale cress	endoplasmic reticulum	30.49	24.92
AT4G28710.1	Thale cress	cytosol	30.57	24.6
AT5G43900.3	Thale cress	cytosol	31.39	24.47
AT2G31900.2	Thale cress	cytosol	30.9	24.21
AT1G04600.1	Thale cress	cytosol	30.98	21.85
AT2G33240.1	Thale cress	cytosol	30.0	20.68
AT5G20470.1	Thale cress	endoplasmic reticulum	3.61	7.91

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:835516	ProteinID:AED96479.1	EMBL:AK229471	ArrayExpress:AT5G54280	EnsemblPlantsGene:AT5G54280
RefSeq:AT5G54280	TAIR:AT5G54280	RefSeq:AT5G54280-TAIR-G	EnsemblPlants:AT5G54280.2	TAIR:AT5G54280.2	Symbol:ATM2
Unigene:At.70236	ProteinID:BAB10751.1	ncoils:Coil	UniProt:F4K0A6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005856	GO:GO:0005886	GO:GO:0006810	GO:GO:0006897	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016459
GO:GO:0016787	GO:GO:0030048	GO:GO:0030054	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8
InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_001078755.1	InterPro:P-loop_NTPase	PFAM:PF00063
PFAM:PF00612	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF702	SMART:SM00015
SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000150563F	EMBL:Z34292	SEG:seg	:

Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]

Coordinates

chr5:-:22039389..22046358

Molecular Weight (calculated)

138570.0 Da

IEP (calculated)

8.965

GRAVY (calculated)

-0.545

Length

1220 amino acids

Sequence
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.