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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32922 Canola cytosol 90.1 93.56
CDY64313 Canola cytosol 90.67 93.29
CDX94736 Canola cytosol 90.99 93.19
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 91.12 92.6
Bra027512.1-P Field mustard cytosol 72.52 92.28
AT1G04160.1 Thale cress cytosol 83.32 86.93
Bra033704.1-P Field mustard cytosol, plastid 91.63 86.49
Solyc09g064200.2.1 Tomato plastid 74.25 76.75
PGSC0003DMT400056647 Potato cytosol 74.19 76.68
KRG95788 Soybean cytosol 73.35 75.68
KRH32270 Soybean cytosol 73.16 75.63
KRH67505 Soybean cytosol 73.04 75.6
VIT_07s0005g04790.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.29 75.56
KRH19659 Soybean cytosol 73.29 75.51
Solyc06g008090.2.1 Tomato cytosol 70.03 73.85
AT4G28710.1 Thale cress cytosol 70.67 72.96
OQU85951 Sorghum cytosol 70.16 72.19
TraesCS6A01G390800.2 Wheat cytosol 69.39 71.92
TraesCS6B01G431400.1 Wheat cytosol 69.39 71.92
TraesCS6D01G377100.1 Wheat cytosol 69.39 71.92
HORVU6Hr1G091010.24 Barley cytosol 69.07 71.54
Zm00001d018481_P033 Maize cytosol 69.58 71.22
Os02t0816900-01 Rice cytosol, plasma membrane 57.7 71.16
Os03t0860700-00 Rice cytosol, plasma membrane 39.42 69.4
GSMUA_AchrUn_... Banana cytosol 67.22 68.31
PGSC0003DMT400038143 Potato cytosol 36.74 67.49
AT2G20290.1 Thale cress endoplasmic reticulum 64.09 67.18
GSMUA_Achr3P27420_001 Banana cytosol 70.73 66.33
KXG34975 Sorghum cytosol 60.83 66.02
Zm00001d019495_P001 Maize cytosol 62.68 65.14
EER90459 Sorghum cytosol 61.09 64.42
Zm00001d034927_P001 Maize cytosol 61.34 64.26
TraesCS1A01G166900.2 Wheat cytosol 61.92 64.17
TraesCS1D01G174000.2 Wheat cytosol 61.85 64.15
HORVU1Hr1G044020.1 Barley cytosol 61.6 63.88
TraesCS1B01G183200.1 Wheat cytosol 61.6 63.84
TraesCS5D01G558600.1 Wheat cytosol 59.94 63.04
TraesCS5B01G566200.1 Wheat cytosol 59.81 62.95
TraesCS4A01G313500.1 Wheat cytosol 59.81 62.95
HORVU5Hr1G125430.15 Barley cytosol 59.04 62.77
AT1G08730.1 Thale cress endoplasmic reticulum 60.96 62.03
AT5G20490.2 Thale cress cytosol 60.64 61.99
AT1G54560.1 Thale cress cytosol 60.06 61.48
AT1G17580.1 Thale cress cytosol 57.83 59.54
AT2G31900.2 Thale cress cytosol 57.38 57.67
AT1G04600.1 Thale cress cytosol 62.88 56.88
AT2G33240.1 Thale cress cytosol 61.41 54.29
GSMUA_Achr1P03340_001 Banana cytosol 64.22 54.09
AT4G33200.4 Thale cress cytosol 51.12 52.53
AT3G58160.1 Thale cress cytosol 39.87 50.24
AT1G50360.1 Thale cress cytosol 25.3 34.35
AT3G19960.2 Thale cress cytosol, plastid 24.98 33.25
AT4G27370.2 Thale cress cytosol 23.83 32.83
AT5G20470.1 Thale cress endoplasmic reticulum 11.18 31.47
AT5G54280.2 Thale cress cytosol 24.47 31.39
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10EntrezGene:834412ProteinID:AED95023.1ArrayExpress:AT5G43900EnsemblPlantsGene:AT5G43900RefSeq:AT5G43900
TAIR:AT5G43900RefSeq:AT5G43900-TAIR-GEnsemblPlants:AT5G43900.3TAIR:AT5G43900.3Unigene:At.9049ncoils:Coil
InterPro:Dilute_domUniProt:F4K7C5GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0005856
GO:GO:0007015GO:GO:0007018GO:GO:0007275GO:GO:0008017GO:GO:0008150GO:GO:0009653
GO:GO:0009791GO:GO:0009908GO:GO:0009987GO:GO:0010090GO:GO:0016043GO:GO:0016049
GO:GO:0016459GO:GO:0016787GO:GO:0030048GO:GO:0030154GO:GO:0040007GO:GO:0048467
GO:GO:0048767GO:GO:0051645GO:GO:0051646GO:GO:0060151GO:GO:0090436InterPro:IPR000048
InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sf
Symbol:MYA2InterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_NInterPro:Myosin_head_motor_domRefSeq:NP_001190465.1
InterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612PFAM:PF01843PFAM:PF02736PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00193
PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF256
SMART:SM00015SMART:SM00242SMART:SM01132SUPFAM:SSF52540UniParc:UPI0001E93186SEG:seg
Description
MYA2Myosin 2 [Source:UniProtKB/TrEMBL;Acc:F4K7C5]
Coordinates
chr5:-:17656894..17667451
Molecular Weight (calculated)
176873.0 Da
IEP (calculated)
7.912
GRAVY (calculated)
-0.354
Length
1565 amino acids
Sequence
(BLAST)
0001: MFLDAAKSDS RFSVCVCDTV LLYVYHVNKT KSPQKVEESR EARKGKNKIQ KAEVFDLRNE MVANFNPSVG SFVWVEDPDE AWIDGEVVQV NGDEIKVLCT
0101: SGKHVVTKIS NAYPKDVEAP ASGVDDMTRL AYLHEPGVLQ NLHSRYDINE IYTYTGSILI AVNPFRRLPH LYSSHMMAQY KGASLGELSP HPFAVADAAY
0201: RQMINDGVSQ SILVSGESGA GKTESTKLLM RYLAYMGGRA AAEGRSVEQK VLESNPVLEA FGNAKTVRNN NSSRFGKFVE IQFDEKGRIS GAAIRTYLLE
0301: RSRVCQVSDP ERNYHCFYML CAAPQEDVKK FKLEEPKKYH YLNQSKCLEL DSINDAEEYH ATRRAMDVVG ISTEEQDAIF SVVAAILHIG NIEFAKGEEI
0401: DSSIPKDDKS LFHLKTAAEL LSCDEKALED SLCKRIMVTR DETITKTLDP EAATLSRDAL AKVMYSRLFD WLVDKINSSI GQDHDSKYLI GVLDIYGFES
0501: FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYKKEEIN WSYIEFVDNQ DILDLIEKKP GGIIALLDEA CMFPRSTHET FAQKLYQTFK THKRFTKPKL
0601: ARSDFTICHY AGDVTYQTEL FLDKNKDYVI AEHQALLNSS SCSFVASLFP PMSDDSKQSK FSSIGTRFKQ QLVSLLEILN TTEPHYIRCI KPNNLLKPGI
0701: FENENILQQL RCGGVMEAIR ISCAGYPTRK HFDEFLARFG ILAPEVLVKN SDDPAACKKL LDKVGLEGYQ IGKTKVFLRA GQMADLDTRR TEVLGRSASI
0801: IQRKVRSYLA KKSFIVLRNS AKQIQSVCRG YLARSVYEGM RREAAALKIQ RDLRRFLARK AYTELYSAAV SVQAGMRGMV ARKELCFRRQ TKAAIIIQTW
0901: CRGYLARLHY RKLKKAAITT QCAWRSKVAR GELRKLKMAA RETGALQAAK NKLEKQVEEL TWRLQLEKRI RTDLEEAKKQ ESAKAQSSLE ELQLKCKETE
1001: ALLIKEREAA KKIAETAPII KEIPVVDQEL MDKITNENEK LKSMVSSLEM KIGETEKKLQ ETTKISQDRL NQALEAESKL VKLKTAMQRL EEKILDMEAE
1101: KKIMHQQTIS TPVRTNLGHP PTAPVKNLEN GHQTNLEKEF NEAEFTTPVD GKAGKSAAER QIMNVDALID CVKDNIGFSN GKPVAAFTIY KCLLHWKCFE
1201: SEKTNVFDRL IQMIGSAIEN EDDNSHLAYW LTSTSALLFL LQKSLKTNGS GATQSKKPPA STSLFGRMAM SFRSSPASGN LAAAAEAAAL AVVRPVEAKY
1301: PALLFKQQLA AYVEKMFGMV RDNLKRELST LLSLCIQAPR SSKGGMLRSG RSFGKDSPAV HWQSIIDGLN SLLVTLKENH VPLVLIQKIY SQTFSYINVQ
1401: LFNSLLLRKE CCTFSNGEFV KSGLAELELW CCQAKEYSGP SWEELKHIRQ AVGFLVIHQK YRISYDEIAN DLCPVLSVQQ LYRICTLYWD DSYNTRSVSQ
1501: EVISSMRTLM TEESNDADSD SFLLDDDSSI PFSIDDISSS MEEKDFVGIK PAEELLENPA FVFLH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.