Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G137900.1 | |
| TraesCS4B01G148100.1 | |
| TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G04600.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G313500.1 | Wheat | cytosol | 95.83 | 95.9 |
| TraesCS5B01G566200.1 | Wheat | cytosol | 95.77 | 95.83 |
| HORVU5Hr1G125430.15 | Barley | cytosol | 94.15 | 95.18 |
| Os03t0860700-00 | Rice | cytosol, plasma membrane | 49.66 | 83.13 |
| Zm00001d034927_P001 | Maize | cytosol | 82.06 | 81.73 |
| EER90459 | Sorghum | cytosol | 81.38 | 81.6 |
| TraesCS1D01G174000.2 | Wheat | cytosol | 75.34 | 74.29 |
| VIT_00s0268g00030.t01 | Wine grape | cytosol | 19.15 | 64.04 |
| Solyc09g064200.2.1 | Tomato | plastid | 64.92 | 63.8 |
| PGSC0003DMT400056647 | Potato | cytosol | 64.72 | 63.61 |
| TraesCS6D01G377100.1 | Wheat | cytosol | 64.31 | 63.38 |
| VIT_07s0005g04790.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 64.38 | 63.11 |
| KRH19659 | Soybean | cytosol | 64.31 | 63.0 |
| Solyc06g008090.2.1 | Tomato | cytosol | 62.77 | 62.94 |
| KRH67505 | Soybean | cytosol | 63.91 | 62.9 |
| KRH32270 | Soybean | cytosol | 63.84 | 62.75 |
| VIT_05s0051g00050.t01 | Wine grape | cytosol | 62.57 | 62.57 |
| KRG95788 | Soybean | cytosol | 63.78 | 62.56 |
| AT1G04160.1 | Thale cress | cytosol | 62.63 | 62.13 |
| Bra032526.1-P | Field mustard | cytosol | 62.77 | 62.1 |
| Bra011053.1-P | Field mustard | cytosol | 62.63 | 61.89 |
| CDY32922 | Canola | cytosol | 62.63 | 61.84 |
| CDY32531 | Canola | endoplasmic reticulum | 62.7 | 61.75 |
| CDY10075 | Canola | endoplasmic reticulum | 62.77 | 61.65 |
| Bra027512.1-P | Field mustard | cytosol | 50.67 | 61.3 |
| CDY64313 | Canola | cytosol | 62.63 | 61.28 |
| CDX94736 | Canola | cytosol | 62.63 | 60.99 |
| AT4G28710.1 | Thale cress | cytosol | 62.1 | 60.95 |
| CDY22325 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 62.43 | 60.32 |
| AT5G43900.3 | Thale cress | cytosol | 63.04 | 59.94 |
| Bra036688.1-P | Field mustard | cytosol | 57.06 | 58.75 |
| CDY39766 | Canola | cytosol | 57.26 | 57.96 |
| AT2G20290.1 | Thale cress | endoplasmic reticulum | 58.13 | 57.94 |
| CDY03315 | Canola | cytosol | 57.19 | 57.85 |
| TraesCS7D01G190300.1 | Wheat | cytosol | 59.21 | 57.58 |
| Bra036460.1-P | Field mustard | cytosol | 57.06 | 57.06 |
| TraesCS3D01G212400.3 | Wheat | cytosol | 58.33 | 56.77 |
| KRG89126 | Soybean | cytosol | 60.22 | 56.67 |
| Solyc09g091080.2.1 | Tomato | cytosol | 61.69 | 56.46 |
| Bra033704.1-P | Field mustard | cytosol, plastid | 62.43 | 56.03 |
| VIT_16s0115g00220.t01 | Wine grape | cytosol | 10.01 | 55.81 |
| CDY31978 | Canola | cytosol | 56.92 | 55.07 |
| CDY05734 | Canola | cytosol | 56.99 | 53.74 |
| TraesCS5D01G396300.1 | Wheat | cytosol | 55.91 | 53.33 |
| PGSC0003DMT400038143 | Potato | cytosol | 30.51 | 53.29 |
| KRH40872 | Soybean | cytosol | 59.68 | 53.21 |
| VIT_04s0079g00370.t01 | Wine grape | cytosol | 14.11 | 51.09 |
| AT1G04600.1 | Thale cress | cytosol | 58.13 | 50.0 |
| CDX79520 | Canola | endoplasmic reticulum | 50.74 | 49.93 |
| GSMUA_Achr1P03340_001 | Banana | cytosol | 62.03 | 49.68 |
| TraesCS6D01G316500.1 | Wheat | cytosol | 49.6 | 49.3 |
| CDX84695 | Canola | cytosol | 57.26 | 49.13 |
| CDY19473 | Canola | cytosol | 57.73 | 49.06 |
| CDY35211 | Canola | plastid | 62.7 | 48.95 |
| CDY65572 | Canola | plastid | 62.5 | 48.92 |
| CDY15512 | Canola | cytosol | 57.66 | 48.89 |
| AT2G33240.1 | Thale cress | cytosol | 58.0 | 48.76 |
| CDX86626 | Canola | cytosol | 57.26 | 48.74 |
| Bra030576.1-P | Field mustard | cytosol | 54.84 | 48.26 |
| CDY17154 | Canola | cytosol | 57.39 | 46.72 |
| TraesCS1D01G363400.1 | Wheat | cytosol | 49.93 | 34.57 |
| TraesCS3D01G248700.2 | Wheat | cytosol | 51.81 | 32.33 |
| TraesCS1D01G159600.1 | Wheat | mitochondrion | 24.93 | 31.15 |
| TraesCS3D01G058300.1 | Wheat | cytosol | 15.79 | 30.68 |
| TraesCS2D01G211200.5 | Wheat | cytosol, endoplasmic reticulum | 25.0 | 29.29 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016787 | InterPro:IPR000048 |
| InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS | InterPro:Kinesin_motor_dom_sf |
| InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N | InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase | PFAM:PF00063 |
| PFAM:PF00612 | PFAM:PF01843 | PFAM:PF02736 | PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 |
| PFscan:PS51456 | PFscan:PS51844 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF697 | SMART:SM00015 | SMART:SM00242 |
| SMART:SM01132 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5D01G558600 | EnsemblPlants:TraesCS5D01G558600.1 | TIGR:cd01384 | TIGR:cd15475 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:560242118..560255081
Molecular Weight (calculated)
169486.0 Da
IEP (calculated)
8.321
GRAVY (calculated)
-0.438
Length
1488 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASKTKSRFV VGSHVWIEDA DEAWMDGQVE EVNGEDLVIN CTNGKKATVN LSTAFPKDTE SPRGGVEDMT RLAYLHEPGV LQNLKSRYAL NEIYTYTGNI
0101: LIAVNPFQRL PHLYNNHMMG IYKGAEFGEL SPHPFAITDR AYRLMINDRI SQAILVSGES GAGKTESTKS LMQYLAFMGG KAKAEGRSVQ EQILESNPVL
0201: EAFGNAKTVR NNNSSRFGKF VEIQFDQYGK ISGAAIRTYL LERSRVCQIS DPERNYHCFY MLCASPPEDR DKFKVGEAKT FHYLNQSNCI DLNGFDDSKE
0301: YIETRRAMGI VGMSNDEQDA IFKVVAAILH LGNIEFGEGS EPDSSAPKDD KSKFHLKTAA ELFMCDAKGL EESLCKRVMA TRGESITKNL DAKGAALSRD
0401: ALSRIVYSRL FDWLVNKINS SIGQDPDSKI LIGVLDIYGF ESFKTNSFEQ FCINLTNEKL QQHFNQHVFK MEQEEYTKEE IDWSYIQFVD NQEILDLIEK
0501: KPGGIIALLD ETCMLRNSTH ETFAEKLYQK YKDNPHFSKP KFSRSDFTVH HYAGNVTYQT DLFLDKNIDY AVNEHQILLN ASKCPFVSSL FPPVEEAAKN
0601: TKFTSIGSSF KQQLQSLLET LSATEPHYIR CIKPNNVLKP AIFENSNVLQ QLRCGGVLEA IRISCLGYPT RRTFYEFVNR FGILHPKALS KGNTEITSTK
0701: MILEKANLVG YQIGKTKVFL RAGQMAELDA LRTEVLGLSA KKIQTKVRSF LCRKKYVELR TCATQLEAVC RGTLARRLYE NLRRQAGALR IQTRYRMRQE
0801: RNKFRDLWSA STTIQCGLRG MAARKKLRFC RQTKAAVIIQ TRCRCHLARS RYVKMLKATL ATQCRWRGRI ARKELRQLKM AAKETGALQA AKSKLEKEVE
0901: ELTWRLQVEK RIRSDLEEAK EAKIQENKKL QSQLQELQQQ FKETKELLKK EQETSKAASE KAEKVTLVPE IRVDETQVNE LTAENEKLTA ENEKLKTLVS
1001: SLETKIEETE ERFKDQDQVR EESLKKATEA ESQLNQLKNA FLSLREKLAS AEAEIINLRQ HAARPRPDPL LNMHKKSNLS VPADEQQSPP TPMEFGRRSL
1101: IERHQESVEA LINCVNENIG FSEGKPVAAI TIYKCLLHWR TFEAEKTNIF DRLIQIFSSA MQKQDSNADL AYWLSNASSL LIILQKSLKP AGTVTTPLKR
1201: TTTQTSFLGR MVFRASSITV DMDLVRQVEG KYPAFLFKQQ LTAFVEGLYG MIRDNVKREV SSVLSHVIQA PRTAKAGLLT DQHSYWKAIV GHFNDLLKIL
1301: QENCVPTIFC RKIFTQLYAY INAQLFNSLL VRRECCSFSN GEYVKQGIEE LEAWCTQAKP EYAGSAWDEL KHISQAVGFL VIFKKFRVSY DEIMSDLCPV
1401: LSVHQLYRIC TQYWDDKYNT ESVSEEVLNE MKTLVNEGAG SGAYLLDEET SMPLSLEEIG NSMDTKEFQN VVPPQELLEN ASFQFLKS
0101: LIAVNPFQRL PHLYNNHMMG IYKGAEFGEL SPHPFAITDR AYRLMINDRI SQAILVSGES GAGKTESTKS LMQYLAFMGG KAKAEGRSVQ EQILESNPVL
0201: EAFGNAKTVR NNNSSRFGKF VEIQFDQYGK ISGAAIRTYL LERSRVCQIS DPERNYHCFY MLCASPPEDR DKFKVGEAKT FHYLNQSNCI DLNGFDDSKE
0301: YIETRRAMGI VGMSNDEQDA IFKVVAAILH LGNIEFGEGS EPDSSAPKDD KSKFHLKTAA ELFMCDAKGL EESLCKRVMA TRGESITKNL DAKGAALSRD
0401: ALSRIVYSRL FDWLVNKINS SIGQDPDSKI LIGVLDIYGF ESFKTNSFEQ FCINLTNEKL QQHFNQHVFK MEQEEYTKEE IDWSYIQFVD NQEILDLIEK
0501: KPGGIIALLD ETCMLRNSTH ETFAEKLYQK YKDNPHFSKP KFSRSDFTVH HYAGNVTYQT DLFLDKNIDY AVNEHQILLN ASKCPFVSSL FPPVEEAAKN
0601: TKFTSIGSSF KQQLQSLLET LSATEPHYIR CIKPNNVLKP AIFENSNVLQ QLRCGGVLEA IRISCLGYPT RRTFYEFVNR FGILHPKALS KGNTEITSTK
0701: MILEKANLVG YQIGKTKVFL RAGQMAELDA LRTEVLGLSA KKIQTKVRSF LCRKKYVELR TCATQLEAVC RGTLARRLYE NLRRQAGALR IQTRYRMRQE
0801: RNKFRDLWSA STTIQCGLRG MAARKKLRFC RQTKAAVIIQ TRCRCHLARS RYVKMLKATL ATQCRWRGRI ARKELRQLKM AAKETGALQA AKSKLEKEVE
0901: ELTWRLQVEK RIRSDLEEAK EAKIQENKKL QSQLQELQQQ FKETKELLKK EQETSKAASE KAEKVTLVPE IRVDETQVNE LTAENEKLTA ENEKLKTLVS
1001: SLETKIEETE ERFKDQDQVR EESLKKATEA ESQLNQLKNA FLSLREKLAS AEAEIINLRQ HAARPRPDPL LNMHKKSNLS VPADEQQSPP TPMEFGRRSL
1101: IERHQESVEA LINCVNENIG FSEGKPVAAI TIYKCLLHWR TFEAEKTNIF DRLIQIFSSA MQKQDSNADL AYWLSNASSL LIILQKSLKP AGTVTTPLKR
1201: TTTQTSFLGR MVFRASSITV DMDLVRQVEG KYPAFLFKQQ LTAFVEGLYG MIRDNVKREV SSVLSHVIQA PRTAKAGLLT DQHSYWKAIV GHFNDLLKIL
1301: QENCVPTIFC RKIFTQLYAY INAQLFNSLL VRRECCSFSN GEYVKQGIEE LEAWCTQAKP EYAGSAWDEL KHISQAVGFL VIFKKFRVSY DEIMSDLCPV
1401: LSVHQLYRIC TQYWDDKYNT ESVSEEVLNE MKTLVNEGAG SGAYLLDEET SMPLSLEEIG NSMDTKEFQN VVPPQELLEN ASFQFLKS
0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
Arabidopsis Description
XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.