Factsheet for GSMUA_Achr1P03340_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0860700-00	Rice	cytosol, plasma membrane	35.04	73.23
VIT_00s0268g00030.t01	Wine grape	cytosol	17.22	71.91
GSMUA_AchrUn_...	Banana	cytosol	58.23	70.26
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.21	70.03
PGSC0003DMT400056647	Potato	cytosol	56.84	69.75
Solyc09g064200.2.1	Tomato	plastid	56.73	69.62
KXG34975	Sorghum	cytosol	53.98	69.56
KRH19659	Soybean	cytosol	56.84	69.52
KRH32270	Soybean	cytosol	56.62	69.48
KRH67505	Soybean	cytosol	55.71	68.45
Solyc06g008090.2.1	Tomato	cytosol	54.41	68.13
VIT_05s0051g00050.t01	Wine grape	cytosol	54.09	67.54
KRG95788	Soybean	cytosol	55.11	67.5
Bra027512.1-P	Field mustard	cytosol	44.67	67.48
GSMUA_Achr3P27420_001	Banana	cytosol	59.9	66.69
CDY32922	Canola	cytosol	53.98	66.56
Bra011053.1-P	Field mustard	cytosol	53.77	66.33
AT1G04160.1	Thale cress	cytosol	53.44	66.2
Zm00001d019495_P001	Maize	cytosol	53.5	66.0
CDY64313	Canola	cytosol	53.98	65.94
HORVU1Hr1G044020.1	Barley	cytosol	53.39	65.74
TraesCS1A01G166900.2	Wheat	cytosol	53.34	65.63
TraesCS1D01G174000.2	Wheat	cytosol	53.28	65.61
GSMUA_Achr7P26040_001	Banana	cytosol	18.78	65.6
CDX94736	Canola	cytosol	53.66	65.25
TraesCS1B01G183200.1	Wheat	cytosol	52.96	65.17
Bra032526.1-P	Field mustard	cytosol	52.74	65.16
CDY32531	Canola	endoplasmic reticulum	52.74	64.86
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.71	64.81
EER90459	Sorghum	cytosol	51.67	64.69
CDY10075	Canola	endoplasmic reticulum	52.74	64.69
AT4G28710.1	Thale cress	cytosol	52.58	64.45
Zm00001d034927_P001	Maize	cytosol	51.78	64.39
AT5G43900.3	Thale cress	cytosol	54.09	64.22
VIT_16s0115g00220.t01	Wine grape	cytosol	9.2	64.04
HORVU5Hr1G125430.15	Barley	cytosol	50.32	63.52
PGSC0003DMT400038143	Potato	cytosol	28.85	62.91
TraesCS4A01G313500.1	Wheat	cytosol	49.95	62.41
TraesCS5B01G566200.1	Wheat	cytosol	49.95	62.41
TraesCS5D01G558600.1	Wheat	cytosol	49.68	62.03
AT2G20290.1	Thale cress	endoplasmic reticulum	48.82	60.75
Bra036688.1-P	Field mustard	cytosol	46.99	60.42
Bra033704.1-P	Field mustard	cytosol, plastid	53.71	60.19
CDY03315	Canola	cytosol	47.52	60.03
CDY39766	Canola	cytosol	47.31	59.8
Solyc09g091080.2.1	Tomato	cytosol	52.05	59.47
GSMUA_Achr8P26250_001	Banana	cytosol	48.71	59.11
Bra036460.1-P	Field mustard	cytosol	46.82	58.47
GSMUA_Achr4P14090_001	Banana	cytosol	48.6	58.11
GSMUA_Achr5P09720_001	Banana	cytosol	48.87	58.09
KRG89126	Soybean	cytosol	49.41	58.06
GSMUA_AchrUn_...	Banana	cytosol	27.77	57.91
CDY31978	Canola	cytosol	46.72	56.44
GSMUA_Achr4P07570_001	Banana	plastid	47.69	55.62
CDY05734	Canola	cytosol	46.88	55.2
GSMUA_Achr3P30890_001	Banana	cytosol	47.79	55.16
KRH40872	Soybean	cytosol	49.41	55.0
AT1G04600.1	Thale cress	cytosol	49.52	53.18
VIT_04s0079g00370.t01	Wine grape	cytosol	11.73	53.04
CDY35211	Canola	plastid	53.77	52.41
CDY65572	Canola	plastid	53.55	52.34
CDX84695	Canola	cytosol	48.65	52.13
CDX79520	Canola	endoplasmic reticulum	42.25	51.92
CDX86626	Canola	cytosol	48.71	51.77
CDY15512	Canola	cytosol	48.76	51.62
CDY19473	Canola	cytosol	48.44	51.4
Bra030576.1-P	Field mustard	cytosol	46.66	51.27
AT2G33240.1	Thale cress	cytosol	48.76	51.19
CDY17154	Canola	cytosol	48.28	49.07
GSMUA_Achr7P26030_001	Banana	cytosol	30.46	47.4
GSMUA_Achr3P07960_001	Banana	cytosol	41.33	46.94
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	49.03	45.44
GSMUA_Achr1P01870_001	Banana	cytosol	19.64	28.79
GSMUA_Achr2P10680_001	Banana	cytosol	18.89	27.81
GSMUA_Achr8P03790_001	Banana	cytosol	18.89	25.92

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:3.40.850.10	MapMan:35.1
ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G03340_001
EnsemblPlants:GSMUA_Achr1P03340_001	EnsemblPlants:GSMUA_Achr1T03340_001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M0RWP2	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PRINTS:PR00193	PFscan:PS50096
PFscan:PS51126	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256	SMART:SM00015	SMART:SM00242
SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI000294CE45	SEG:seg	:	:

Description

myosin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03340_001]

Coordinates

chr1:-:2719410..2751361

Molecular Weight (calculated)

212168.0 Da

IEP (calculated)

8.370

GRAVY (calculated)

-0.364

Length

1858 amino acids

Sequence
(BLAST)

0001: MTKLSYLHEP GVLHNLRSRF MMNEIYLESV KDVCHLRPYL PSDLFGLKLA ETYTGNILIA VNPFQRLPHL YNSHMMEEYK GADFGELAPH PFAIADAAYR
0101: RMMIDETSQS ILVSGESGAG KTESTKMLMR FLAYMGGKAA TEGRSVEQQI LESNPVLEAF GNAKTVRNNN SSRFGKFVEI QFDLKGRITG GAVRTYLLER
0201: SRVCQISDPE RNYHCFYMIC AAPSEVFSLT HIGPWPGRYR SGMHCLVRDK KTQAVSPAGN LLTELDQAKS PHPHVVQAWT SKRHLVEQKT ESKQQKEGKN
0301: GVILWLLGSD IERYKVGNPR TFHYLNQSNC YEIDGLDESE EYLATRRAMD VVGISSDEQD AIFRVVAAIL HLGNVEFAEG EEEDSSVPKD EKSWYHLRTA
0401: AELFMCNEKA LEDSLCKRII VTRGENITKN LNPEAAALSR DALAKVVYSR LFDWLVNRIN CSIGQDPDSK FLIGVLDIYG FESFKTNSFG HDPSCPIQDA
0501: FKSNCHALNS NVCITCSFEQ FCINLTNEKL QQHFNQHVFK MEQEEYTKEE IDWSYIEFID NQDILDLIEK VVYRINPCSP AQGSQYYCIP SVRAVCTNLI
0601: GDQYGRYKLV WRYAHRIICR YIGMVRYKPG GIIALLDEAC MLPRSTHETF AEKLYQTFKN HQRFSKPKFS RSDFTIRHYA GDVTYQTELF LDKNKDYVVA
0701: EHQELLGASG CTFVADLFPP LSEDSSKSSK FSSIGLRFKQ QLQTLLETLS ATQPHYIRCV KPNNLLKPAI FENHNVLQQL RCGGVLEAIR ISCAGFPTRR
0801: TFDEFIDRFG IFASELLDES SDEAAVTKRL MEKVDLKGFQ VTLQLASRGM QLKSEDVSKS CQMYKIFPLK SIFASNDHIH AQSVNLQIGK TKVFLRAGQM
0901: AELDARRNEV LGLSAKKIQR KFRSYLARKN FISLRKSAIS IQATCRGQIA RQHYQNMQRQ AASLIIQMYF RMHLARKAYT DLCSASVIIQ SGLRGMVARK
1001: ELHFRQETRA AVIIQSYFRR HLARSHYARL KMAAITMQCA WRARVARWEL RKLKLAAKET GALQEAKNKL EKQVEELTWR LQLEKRMRVR FLSMLSSFHL
1101: NRKVLMETHL ITGHISQDGS CHESFMVELD LEESKSQEIT KLQVALQDTQ GQFKETKALL VKEKEATKRA AEDAPVIHEV QVTDTDLIDK VTAENEKLKV
1201: KLKTHFQDLS VGMVHNQPDQ LMVRKRAEEV EEKDVQEERE EEGIQVSDKD VGKRDLFIGG PTTKMEKMTR NSKENAKKKG MELAIPSYIS FGRPINAHTI
1301: RKLTGYAGVL HLLFSYTMLH YKLQALVSSL ETRIHETEKK YEETTKISEE RLKKSLEAES KITELKNSVK RFLYFSHLLQ EKLSNMESEN QVLRQQALLH
1401: SSVKSPPEHS IDGVSELNKE TKDFETVPPA IKNLARFDSR IRKSYIDRQH VIFYMQENVD TLIKCVVQNI GFDLGKPAAA LTIYKCLLHW KLFEAEKTSV
1501: FDRLIQMIGS AIEDDESNDH LAYWLSNTST LLCLLQKSLK ASGAVVGTPR RKPPPPTSLF GRMALVCGFR SSSSLPVDGL AFVRQVEAKY PALLFKQQLT
1601: AYVEKIFGII RENTKKELTS LISLCLQAPK TAKTKSMVRG RSFGNSTQNS TWQSIIDNLD NLLITLQENY VPAVLIRNIF TQVFSFINVQ LFNSLLLRRE
1701: CCSFSNGEYM KSGLSELELW FAKAKPEHVG SSWDELKHTR QAVGFLVIFQ KYRISYDEIV NDLCPVLSVQ QLYKICTQYW DDKYNSQSVS PTVLSDMNTL
1801: MIKDSADADS DSAFLLEDDP SIPFSLDEVS SSIQDKDLHG VKPPEDLLKN PAFQFLND

Best Arabidopsis Sequence Match ( AT1G04160.2 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VCFTLV

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.