Factsheet for GSMUA_Achr1P01870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0488800-01	Rice	cytosol	58.28	77.79
GSMUA_Achr2P10680_001	Banana	cytosol	73.82	74.17
VIT_10s0071g00210.t01	Wine grape	plastid	68.77	73.9
Bra001768.1-P	Field mustard	cytosol	65.77	73.42
HORVU1Hr1G043440.4	Barley	cytosol	65.06	73.07
Solyc02g020910.2.1	Tomato	nucleus	66.56	72.95
KRG89103	Soybean	cytosol	67.59	72.87
Bra035834.1-P	Field mustard	cytosol	65.85	72.48
KRG90612	Soybean	cytosol	66.8	72.39
CDY24591	Canola	cytosol, plastid	66.17	72.39
KRH40907	Soybean	cytosol	66.72	72.31
KRH36145	Soybean	cytosol	66.96	72.19
Zm00001d032637_P004	Maize	mitochondrion	67.59	71.96
Zm00001d013967_P004	Maize	mitochondrion	67.74	71.94
EER94044	Sorghum	mitochondrion	67.43	71.49
AT1G50360.1	Thale cress	cytosol	64.75	71.21
Bra018844.1-P	Field mustard	cytosol	64.59	71.09
CDY42506	Canola	cytosol, plastid	64.35	71.02
CDY36068	Canola	cytosol, mitochondrion	63.33	70.87
CDY22791	Canola	cytosol, plastid	64.67	70.87
TraesCS1D01G159600.1	Wheat	mitochondrion	66.17	70.44
TraesCS1B01G179500.2	Wheat	mitochondrion	66.32	70.44
CDX82270	Canola	cytosol	66.4	70.4
TraesCS1A01G162800.1	Wheat	mitochondrion	66.09	69.95
CDY29324	Canola	cytosol	62.78	69.34
Bra039641.1-P	Field mustard	cytosol	62.7	69.25
AT3G19960.2	Thale cress	cytosol, plastid	63.88	68.88
CDY53932	Canola	cytosol, plastid	62.62	67.23
CDY25361	Canola	cytosol	65.69	53.78
GSMUA_Achr8P03790_001	Banana	cytosol	51.1	47.86
GSMUA_Achr7P26040_001	Banana	cytosol	17.59	41.92
GSMUA_AchrUn_...	Banana	cytosol	25.24	35.91
GSMUA_Achr8P26250_001	Banana	cytosol	30.52	25.28
GSMUA_Achr5P09720_001	Banana	cytosol	30.36	24.63
GSMUA_AchrUn_...	Banana	cytosol	29.89	24.61
GSMUA_Achr3P07960_001	Banana	cytosol	31.15	24.14
GSMUA_Achr4P14090_001	Banana	cytosol	29.5	24.07
GSMUA_Achr4P07570_001	Banana	plastid	30.13	23.98
GSMUA_Achr3P27420_001	Banana	cytosol	31.47	23.91
GSMUA_Achr3P30890_001	Banana	cytosol	30.05	23.66
GSMUA_Achr1P03340_001	Banana	cytosol	28.79	19.64
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	30.36	19.2
GSMUA_Achr7P26030_001	Banana	cytosol	12.62	13.4

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	MapMan:35.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016459	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G01870_001	EnsemblPlants:GSMUA_Achr1P01870_001
EnsemblPlants:GSMUA_Achr1T01870_001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf
UniProt:M0RW95	InterPro:MYSc_Myo8	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015
SMART:SM00242	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002961FAA	SEG:seg	:

Description

myosin-2 heavy chain, non muscle, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G01870_001]

Coordinates

chr1:-:1538111..1556930

Molecular Weight (calculated)

143720.0 Da

IEP (calculated)

9.081

GRAVY (calculated)

-0.389

Length

1268 amino acids

Sequence
(BLAST)

0001: MASVRMSSPR TREPKKTTRP ERPKVKPRTP ISLQSVKSLP HDFRFTSGSP SASEDKKVDS GSKLAVLIEN DEKEKGAEDA TGEEDSPYSS KASSREERPP
0101: EEATDLSTSR MPQISPSRFE SNWGDTSSYV AKKKHQAWCQ LSNGDWALGT ILSSSGSESV ISLPHGGVIS LNTETLLPSN PEILDGVDDL MQLSYLNEPS
0201: VLYNLQFRYS RDMIYTRAGP VLVAINPFKE VNLYGNEYIE AYKHKSMNSP HVYVIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS
0301: GIEYEILQTN PILEAFGNAR TLRNDNSSRF GKLIEIHFSV TGKISGASIQ TFLLEKSRVV QCAVGERSYH IFYHLCAGAP QSLRIVYAYH LCMQTSQHEL
0401: LSKYLSKLNL RKADEYKYLK QSNCYTISSV DDAERFHVVK KAMDVVHISK EDQESVFAML AAVLWLGNIS FTVIDNENHV EVVADEGAQT VAKLIGCTLS
0501: ELKLALSTRK MKVGNDNIVQ KLTLSQAIDT RDALAKSLYA SLFEWLVEQI NKSLGIGKRR TGRSISILDI YGFESFDKNS FEQFCINYAN ERLQQHFNRH
0601: LFKLEQEEYI QDGIDWAKVD FEDNQDCLNL FEKISNIKKH PLFESDFHFI IMFVIVYLHA LYLNIKENLF IGFGRNLIII VFAISYCKQI KPLGLLSLLD
0701: EESTFPNGTD LTFANKLKQH LNSSPCFRGE RGKAFTVHHY AGEVVYDTTG FLEKNRDLLH MDSIQLLASC TCHLPQAFAS KMLFQSENAA SNPYRSGGAD
0801: SQKLSVASKF KGQLFQLMQR LGNTTPHFIR CIKPNNSQLP ETYEQGLVLQ QLRCCGVLEV VRISRSGYPT RMSHQKFARR YGFLLLENVA SRDPLSVSVA
0901: ILQQFNILPE MYQVGYTKLF FRTGQIGALE DTRNRTLHGI LRVQSCFRGH QARRYVKERK KGIVALQSFI RGEKTRQTYV VLLQRHRAAI VLQRNMRCRS
1001: VRRDFVSVRN ASIVIQSVIR GWLVRRCSGN ISLLNATEYI GVTKGGESEQ VSVKATVLAE LQRRILKAEA ALRDKEEEND ILHQRLQQYE SRWSEYEQKM
1101: RSMEEVWQKQ MMSLQSSLSV AKKSLAIDDV ERSSDASVDH SWGSAEHVRT KGREENGTPR LVSRVLDREM SAGLSVISRL AEEFDQRTQV FADDAKFLVE
1201: VKSGQSDASL NPDKELRRLK QNFELWKKDF SSRLRETKVI INKLGTDDAG SDKGKRKWWV RLNSARII

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.