Factsheet for TraesCS1A01G162800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G179500.2	Wheat	mitochondrion	97.91	98.24
TraesCS1D01G159600.1	Wheat	mitochondrion	97.41	97.98
HORVU1Hr1G043440.4	Barley	cytosol	91.99	97.61
Os10t0488800-01	Rice	cytosol	73.12	92.21
EER94044	Sorghum	mitochondrion	88.73	88.88
Zm00001d032637_P004	Maize	mitochondrion	87.23	87.74
Zm00001d013967_P004	Maize	mitochondrion	86.56	86.85
KRG90612	Soybean	cytosol	66.86	68.46
Solyc02g020910.2.1	Tomato	nucleus	66.03	68.37
KRH36145	Soybean	cytosol	66.94	68.2
Bra001768.1-P	Field mustard	cytosol	64.27	67.78
VIT_10s0071g00210.t01	Wine grape	plastid	66.61	67.63
Bra035834.1-P	Field mustard	cytosol	64.69	67.27
KRG89103	Soybean	cytosol	66.03	67.26
Bra018844.1-P	Field mustard	cytosol	64.19	66.75
CDY22791	Canola	cytosol, plastid	64.44	66.72
CDY24591	Canola	cytosol, plastid	64.52	66.7
CDY42506	Canola	cytosol, plastid	63.94	66.67
KRH40907	Soybean	cytosol	64.86	66.41
AT1G50360.1	Thale cress	cytosol	63.69	66.18
GSMUA_Achr1P01870_001	Banana	cytosol	69.95	66.09
Bra039641.1-P	Field mustard	cytosol	63.11	65.85
CDY29324	Canola	cytosol	63.11	65.85
CDY36068	Canola	cytosol, mitochondrion	62.27	65.84
CDX82270	Canola	cytosol	64.69	64.8
AT3G19960.2	Thale cress	cytosol, plastid	62.69	63.86
CDY53932	Canola	cytosol, plastid	62.85	63.76
GSMUA_Achr2P10680_001	Banana	cytosol	64.61	61.33
TraesCS2A01G204700.1	Wheat	cytosol, plastid	53.59	50.83
CDY25361	Canola	cytosol	64.36	49.77
TraesCS3A01G209500.1	Wheat	cytosol	32.89	25.85
TraesCS6A01G390800.2	Wheat	cytosol	32.22	25.56
TraesCS6A01G336500.1	Wheat	cytosol	31.47	25.18
TraesCS1A01G166900.2	Wheat	cytosol	31.72	25.17
TraesCS4A01G313500.1	Wheat	cytosol	31.14	25.08
TraesCS5A01G386500.1	Wheat	cytosol	31.39	24.16
TraesCS1A01G358500.1	Wheat	cytosol	29.13	16.75
TraesCS3A01G248800.7	Wheat	cytosol	30.3	15.18
TraesCS3A01G058100.1	Wheat	cytosol	6.26	9.47

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009
InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N
InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF312	SMART:SM00015
SMART:SM00242	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1A01G162800	EnsemblPlants:TraesCS1A01G162800.1	TIGR:cd01383	SEG:seg

Description

No Description!

Coordinates

chr1A:-:292078418..292089558

Molecular Weight (calculated)

134190.0 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.428

Length

1198 amino acids

Sequence
(BLAST)

0001: MASVEVRSVR KSAALRPRGP TKVQPARSMS LDYKYSAARA GVEAGPAANG VGRRAAAAAA DEEGEAVPPE RDADSPYSSK ATTTEEEESA GGGGEVDSAS
0101: SAAATLRRPS PTAAAGPSPR DTRWGDTSSY GAKKKHRVFC QLPNGDWALC TVITTSGDES VLKVPEGKVL RLKTESLQPA NPEILDGVDD LMQLSYLSEP
0201: SVLYNLQYRY SQDMIYTKAG PVLVAVNPFK KVALYGNEYI KAYRNKTMDS PHVYAIADSA LREMKRDEVN QSIIISGESG AGKTETAKIA MQYLASLGGG
0301: SGIEYEILQT NPILEAFGNA KTLRNDNSSR FGKLIEIHFS TTGRICGAMI QTFLLEKSRV VQCAVGERSY HIFYQLCAGA PTTLREKLNL KKVDEYKYLK
0401: QSCCYSIAGV DDAEMFHAVT EAMNIVHISK EDQDNVFAMV SAVLWLGDVS FTIIDNENHV EITVEEDFIS AAETVSRLLG CSIEDLNLVL SKRHMKVNNE
0501: NIVQKLTLTQ ATDTRDALAK ALYASLFEWL VEQINKSLSV GKRRTGRSIS ILDIYGFESF DKNSFEQFCI NYANERLQQH FNRHLFKLEQ EEYVEDGIDW
0601: AKVEFEDNQD CLNLFEKKPL GLLSLLDEES TFPNATDLTF ANKLKQHLDT NSCFRGERGK AFTVRHYAGE VAYDTSGFLE KNRDLLHMDS IQFLAKCKLS
0701: IPQTFASKML AQSDNLESVP YRPSVADSQK LSVAMKFKGQ LFQLMQRLES TTPHFIRCIK PNNLQLPAIY GQELVLQQLK CCGVLEVVRI SRSGYPTRMT
0801: HQKFARRYGF LLLEDVASQD PLSVSVAILH QFNILPEMYQ VGYTKLFFRT GQIGNLENTR NRTLHGVLRV QSCFRGHQAR RHASERIRGV LALQSFIRAE
0901: NARQSYSSLS KKHRAATLVQ KNLKGWLARR YFIKIRKASV VVQSGIRGCL VRRCAGNVDL LNVLREFESK KEADGDQILI KASFLAELQR RILRAEATVR
1001: EKDEENEMLH QRLQQYENRW LEYEQKMKAM EEMWQKQMRS LQSSLSVAKK SLALDETPRM SDSSVEQSWE SNGNHVGGGS SQQLAAAPRI TGRDMNASMS
1101: VIGRLAEELE QRSQVFADDA KFLVEVKSGQ ADASLNPDVE LRRLKQNFDS WKKDFGSRIR ETKVILNKLA SGGGGGNESS PNSAKRKWWG RLNTSKFS

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.