CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36068	Canola	cytosol, mitochondrion	89.65	91.7
AT3G19960.2	Thale cress	cytosol, plastid	91.46	90.14
CDX82270	Canola	cytosol	92.75	89.88
CDY22791	Canola	cytosol, plastid	84.99	85.13
CDY42506	Canola	cytosol, plastid	84.3	85.03
CDY29324	Canola	cytosol	81.71	82.49
CDY53932	Canola	cytosol, plastid	81.45	79.93
VIT_10s0071g00210.t01	Wine grape	plastid	79.47	78.05
KRG90612	Soybean	cytosol	78.17	77.44
KRH36145	Soybean	cytosol	78.26	77.13
Solyc02g020910.2.1	Tomato	nucleus	75.67	75.8
KRG89103	Soybean	cytosol	76.88	75.77
KRH40907	Soybean	cytosol	75.93	75.21
CDY25361	Canola	cytosol	96.46	72.18
Os10t0488800-01	Rice	cytosol	59.1	72.11
HORVU1Hr1G043440.4	Barley	cytosol	65.66	67.4
Zm00001d013967_P004	Maize	mitochondrion	68.85	66.83
EER94044	Sorghum	mitochondrion	68.51	66.39
Zm00001d032637_P004	Maize	mitochondrion	68.08	66.25
GSMUA_Achr1P01870_001	Banana	cytosol	72.39	66.17
TraesCS1B01G179500.2	Wheat	mitochondrion	66.78	64.82
TraesCS1D01G159600.1	Wheat	mitochondrion	66.61	64.82
TraesCS1A01G162800.1	Wheat	mitochondrion	66.7	64.52
GSMUA_Achr2P10680_001	Banana	cytosol	67.13	61.65
CDY52239	Canola	cytosol	54.87	53.13
CDY28777	Canola	cytosol	54.18	52.38
CDY14319	Canola	cytosol, plastid	54.27	52.2
CDY18321	Canola	cytosol	53.93	51.78
CDX68955	Canola	cytosol	20.36	45.38
CDX91798	Canola	cytosol	18.81	43.25
CDY72648	Canola	cytosol	9.49	40.44
CDX88973	Canola	cytosol	30.11	29.7
CDY00546	Canola	cytosol	29.94	28.89
CDX67724	Canola	cytosol	29.16	27.59
CDX98274	Canola	nucleus	29.25	27.29
CDX81833	Canola	cytosol	33.91	26.83
CDY32922	Canola	cytosol	34.77	26.74
CDY64313	Canola	cytosol	34.86	26.56
CDX94736	Canola	cytosol	34.6	26.24
CDY03315	Canola	cytosol	33.3	26.24
CDY39766	Canola	cytosol	33.22	26.19
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.77	26.17
CDY66597	Canola	cytosol	34.25	26.08
CDY32531	Canola	endoplasmic reticulum	33.99	26.08
CDY10075	Canola	endoplasmic reticulum	33.91	25.94
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.91	25.92
CDY45087	Canola	cytosol	34.34	25.69
CDX70927	Canola	cytosol	34.43	25.64
CDY42350	Canola	cytosol	33.13	25.55
CDX95235	Canola	cytosol	33.82	25.52
CDX72393	Canola	cytosol	32.7	25.17
CDY51846	Canola	cytosol	34.25	25.11
CDY46128	Canola	cytosol	32.44	25.03
CDY31978	Canola	cytosol	33.05	24.9
CDY31130	Canola	cytosol, mitochondrion	32.79	24.68
CDX79446	Canola	cytosol	33.13	24.66
CDX79520	Canola	endoplasmic reticulum	32.01	24.54
CDX84752	Canola	cytosol	33.05	24.54
CDY05734	Canola	cytosol	33.3	24.46
CDX75338	Canola	cytosol	32.61	22.81
CDX84695	Canola	cytosol	33.39	22.32
CDY15512	Canola	cytosol	33.22	21.94
CDY19473	Canola	cytosol	33.13	21.93
CDX86626	Canola	cytosol	33.05	21.91
CDX93542	Canola	cytosol	32.61	21.84
CDX95038	Canola	cytosol	31.67	21.69
CDY17154	Canola	cytosol	33.22	21.06
CDY65572	Canola	plastid	34.43	20.99
CDY35211	Canola	plastid	34.43	20.93
CDY69853	Canola	endoplasmic reticulum	6.64	15.94
CDY71471	Canola	cytosol	3.71	8.87
CDY65579	Canola	endoplasmic reticulum	8.63	8.86
CDY16536	Canola	cytosol	2.93	7.57
CDX92461	Canola	cytosol	2.93	7.34
CDY69448	Canola	extracellular, golgi, mitochondrion	1.64	5.76
CDX72394	Canola	nucleus	0.17	0.2

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078GGV9	UniProt:A0A078GGV9	EnsemblPlants:CDY24591	ProteinID:CDY24591	ProteinID:CDY24591.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	EnsemblPlantsGene:GSBRNA2T00026931001	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8
InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0004EABC72	SEG:seg	:

Description

BnaC05g32750DBnaC05g32750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGV9]

Coordinates

chrLK032161:-:220135..227080

Molecular Weight (calculated)

130295.0 Da

IEP (calculated)

8.419

GRAVY (calculated)

-0.465

Length

1159 amino acids

Sequence
(BLAST)

0001: MAQKVSPSMQ SLKSLPADYR FDGENSSFGL TNSSIPRQGG LRNGVSQADT AAGDSDDSPY SSRHGVSVEE QSLTDDVEPG AATMPLPQND ERRWSDTSAY
0101: ARKKILQSWV QLPNGNWELG KILSTSGEES VISLPEGKVM KVISETLVPA NPDILDGVDD LMQLSYLNEP SVLYNLNYRY NQDMIYTKAG PVLVAVNPFK
0201: EVPLYGNRYI EAYRKKSNES PHVYAIADTA IREMIRDEVN QSIIISGESG AGKTETAKIA MQYLAALGGG SGIEYEILKT NPILEAFGNA KTLRNDNSSR
0301: FGKLIEIHFS ESGKISGAQV QTFLLEKSRV VQCAEGERSY HIFYQLCAGA SPALREKLNL TSAHEYKYLG QSNCYSINGV DDAERFHSVK EALDIVHVSK
0401: EDQESVFAML AAVLWLGNVS FTVIDNENHV EPVADESLST VAKLIGCNIN ELKLSLSKRN MRVGKDTIVQ KLTLPQAIDA RDALAKSVYS CLFDWLVEQI
0501: NESLAVGKRR TGRSISILDI YGFESFDKNS FEQFCINYAN ERLQQHFNRH LFKLEQEEYI QDGIDWTRVD FEDNQDCLSL FEKKPLGLLS LLDEESTFPN
0601: GTDLTLANKL KQHLHSNSCF RGDREKLFTV VHYAGEVTYD TTGFLEKNRD LLHLDSIQLL SSCSCHLPRA FASSMLIQSE KPVVGPLYKA GGADSQRLSV
0701: ATKFKGQLFQ LMQRLGNTTP HFIRCIKPNN VQSPGLYEQG LVLQQLRCCG VLEVVRISRS GFPTRVSHQK FARRYGFLLV ENIADKDPLS VSVAILHQFN
0801: ILPEMYQVGY TKLFFRTGQI GVLEDTRNRT LHGILRVQSS FRGYQARCHL KKLKMGISIL QSFVRGDKVR KEFAELRRRH RAAATIQSQV KSKIARKQYK
0901: GITEASLVIQ SAIRGWLVRR CSGDIGWLKS GGTKTNESGE VLVKASVLSD LQRRVLKSEA ALREKEEEND ILQQRLQQYE NRWSEYETKM KSMEEIWQKQ
1001: MRSLQSSLSI AKKSLAVEDS ARNSDASVNA SDATDWDSSS NQFKSQASNG GGGRQQQQPM SAGLSVIGRL AEEFEQRAQV FGDDAKFLVE VKSGQVEANL
1101: NPERELRRLK QMFETWKKDY GGRLRETKMI LSKLGSEESG GSMEKVKRKW WGRRNSTRY

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.