CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027968.1-P	Field mustard	cytosol	98.8	97.76
CDX95235	Canola	cytosol	98.07	95.96
AT1G54560.1	Thale cress	cytosol	92.42	90.84
CDY31130	Canola	cytosol, mitochondrion	88.69	86.56
CDY72648	Canola	cytosol	15.64	86.4
CDX91798	Canola	cytosol	28.61	85.32
VIT_14s0081g00160.t01	Wine grape	cytosol	84.7	83.58
KRG92711	Soybean	cytosol	83.03	81.41
KRH34117	Soybean	cytosol	82.57	81.01
GSMUA_Achr7P26040_001	Banana	cytosol	28.28	79.89
Solyc11g006220.1.1	Tomato	cytosol, extracellular	80.57	79.36
KRH68770	Soybean	cytosol	79.91	79.27
Os06t0488200-01	Rice	cytosol, plasma membrane	79.84	78.48
OQU76115	Sorghum	cytosol	76.65	77.79
Zm00001d044819_P002	Maize	cytosol	79.11	77.76
TraesCS7D01G190300.1	Wheat	cytosol	78.38	76.99
GSMUA_Achr4P14090_001	Banana	cytosol	79.51	76.9
TraesCS7B01G094100.1	Wheat	cytosol	77.18	75.72
HORVU7Hr1G038500.56	Barley	cytosol	78.31	75.35
CDX93542	Canola	cytosol	85.83	74.52
CDX95038	Canola	cytosol	82.5	73.29
CDY66597	Canola	cytosol	70.99	70.11
CDX70927	Canola	cytosol	72.52	70.05
CDY45087	Canola	cytosol	71.12	69.01
CDY51846	Canola	cytosol	72.26	68.69
CDX81833	Canola	cytosol	63.47	65.12
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.54	64.97
GSMUA_Achr7P26030_001	Banana	cytosol	50.57	63.65
CDX68955	Canola	cytosol	21.36	61.73
CDY65579	Canola	endoplasmic reticulum	45.91	61.12
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	80.77	60.55
CDY32922	Canola	cytosol	60.55	60.38
CDY64313	Canola	cytosol	60.48	59.76
CDX94736	Canola	cytosol	60.41	59.42
CDY32531	Canola	endoplasmic reticulum	59.68	59.36
CDY10075	Canola	endoplasmic reticulum	59.81	59.34
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.35	58.9
CDX79446	Canola	cytosol	60.01	57.93
CDX88973	Canola	cytosol	45.24	57.87
CDX84752	Canola	cytosol	60.08	57.85
CDY39766	Canola	cytosol	55.95	57.21
CDY03315	Canola	cytosol	55.95	57.17
CDY00546	Canola	cytosol	45.11	56.45
CDX67724	Canola	cytosol	44.71	54.86
CDX98274	Canola	nucleus	44.78	54.19
CDY31978	Canola	cytosol	54.62	53.38
CDY69448	Canola	extracellular, golgi, mitochondrion	11.51	52.42
CDY05734	Canola	cytosol	54.56	51.96
CDX72393	Canola	cytosol	51.76	51.66
CDY46128	Canola	cytosol	51.5	51.53
CDX79520	Canola	endoplasmic reticulum	49.7	49.4
CDX75338	Canola	cytosol	53.23	48.28
CDX84695	Canola	cytosol	55.49	48.1
CDY65572	Canola	plastid	60.61	47.92
CDY35211	Canola	plastid	60.55	47.74
CDX86626	Canola	cytosol	54.89	47.2
CDY15512	Canola	cytosol	55.02	47.12
CDY19473	Canola	cytosol	54.82	47.06
CDY16536	Canola	cytosol	13.91	46.55
CDY71471	Canola	cytosol	14.9	46.19
CDX92461	Canola	cytosol	14.17	46.0
CDY17154	Canola	cytosol	54.56	44.86
CDY69853	Canola	endoplasmic reticulum	12.11	37.68
CDY42506	Canola	cytosol, plastid	25.35	33.16
CDY24591	Canola	cytosol, plastid	25.55	33.13
CDY22791	Canola	cytosol, plastid	25.22	32.76
CDY29324	Canola	cytosol	24.95	32.67
CDY36068	Canola	cytosol, mitochondrion	24.62	32.66
CDX82270	Canola	cytosol	25.62	32.19
CDY53932	Canola	cytosol, plastid	24.82	31.58
CDY28777	Canola	cytosol	25.15	31.53
CDY52239	Canola	cytosol	25.08	31.5
CDY18321	Canola	cytosol	24.82	30.9
CDY14319	Canola	cytosol, plastid	24.55	30.62
CDY25361	Canola	cytosol	25.55	24.79
CDX72394	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078HV10	UniProt:A0A078HV10	EnsemblPlants:CDY42350	ProteinID:CDY42350	ProteinID:CDY42350.1
ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00074618001
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf
InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PFAM:PF01843	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PANTHER:PTHR13140
PANTHER:PTHR13140:SF510	SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI0004EF2BEB
SEG:seg	:	:	:	:	:

Description

BnaA09g15850DBnaA09g15850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV10]

Coordinates

chrLK032522:+:69854..77727

Molecular Weight (calculated)

171120.0 Da

IEP (calculated)

9.520

GRAVY (calculated)

-0.434

Length

1503 amino acids

Sequence
(BLAST)

0001: MGKLKKSMDK MLRFRPQMEK RLITAKLSKI YPKDMEAPAG GVDDMTKLSY LHEPGVLQNL KIRYELNEIY TYTGNILIAI NPFQRLPHIY DAHMMQQYKG
0101: APFGELSPHV FAVADVAYRA MINEGKSNSI LVSGESGAGK TETTKMLMRY LAYLGGRAVT EGRTVEQQVL ESNPVLEAFG NAKTVRNNNS SRFGKFVEIQ
0201: FDKQGRISGA AVRTYLLERS RVCQISDPER NYHCFYLLCA APQEEIEKYK LGHPKTFHYL NQSKCFELVG ISDAHDYIAT RRAMDIVGIS EKEQEAIFRV
0301: VAAILHIGNI EFTKGKDVDS SVPKDDKAKF HLNTVAELLM CDVKELEDAL CKRVMVTPEE VIKRSLDPQS AAISRDGLAK TIYSRLFDWL VQKINVSIGQ
0401: DANSRSLIGV LDIYGFESFK TNSFEQFCIN FTNEKLQQHF NQHVFKMEQE EYTKEAIDWS YIEFVDNKDV LDLIEKKPGG IVALLDEACM FPKSTHETFA
0501: NKLYQTFKTN KRFIKPKLSR TDFTVSHYAG EVQYQSDQFL DKNKDYVIAE HQDLLGASKC PFVVGLFPKL EETSKSSKFS SIGSRVKLQL QQLMETLNST
0601: EPHYIRCVKP NNLLKPAIFE NINIMQQLRC GGVLEAIRIS CAGFPTRKPF FEFVNRFGLL SPEALEGNYE EKAASKKILD NIGLKGYQIG KTKIFLRAGQ
0701: MAELDARRAL VLSDAAKKIQ RRIRTHQARR RFILLREATI SLQALCRGRL SSKLFENLRR QAAAVKIQKN GRRYHSRKAY KNMHVAALAV QTGLRAMAAH
0801: KEFRFKKQTK AATTIQAQWR CHRATSYYKK LKKGVILSQS RWRGRLAKKE LRKLKMASRE TGALKEAKDI LEKKVEELTY RVQLEKRLRV DLEEQKTQEI
0901: TKMQSSMEEM RKKVEETNVL LVKEREAAKK AIEEAPPVVT ETQVVVEDTQ KIESLTEQVE GLKTDLEQEK QRADDTARKF DEAQESNEER KNKLEETEKK
1001: VQLLQENITR LEEKCTNLES ENKVLRQQAV SIAPNKLLSG RSRSILQRGS ASGHLSVDAR PSLDLHSHSI NHRDIAEVED KPQKSLNEKQ QENQELLIRC
1101: IVQHLGFQGN RPITACIIYK CLLQWRSFEV ERTSVFDRII QTIGHAIETQ DNNDILAYWL SNASTLLLLL QRTLKASGAA GMAPQRRRSS SATLFGRMTQ
1201: SFRGAPQGVN LSMINGGADT LRQVEAKYPA LLFKQQLTAY VEKIYGMIRD NLKKEISPLL GLCIQAPRTS RASLVKGASR SVGNSEAQQA LIAHWQGIVK
1301: SLTNFLNTLK SNHVPPFLVR KVFTQIFSFI NVQLFNSLLL RRECCSFSNG EYVKAGLAEL EHWCYKATDE YAGSSWDELK HIRQAIGFLV IHQKPQKTLD
1401: EISHDLCPVL SIQQLYRIST MYWDDKYGTH SVSPDVIANM RVLMTEDSNN AVSNSFLLDD DSSIPFSVDD LSKSMERIEI GDVEPPPLIR ENSGFSFLLP
1501: CSG

Best Arabidopsis Sequence Match ( AT1G54560.1 )
(BLAST)

0001: MRNSGTPVNI IVGSHVWIED SDVAWIDGLV EKINGQDVEV QATNGKKITA KLSKIYPKDM EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE LNEIYTYTGN
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD

Arabidopsis Description

XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.