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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79520 Canola endoplasmic reticulum 81.14 93.06
CDY19473 Canola cytosol 84.6 83.78
AT2G33240.1 Thale cress cytosol 83.74 82.03
CDY17154 Canola cytosol 84.31 79.98
CDY15512 Canola cytosol 75.2 74.3
CDX86626 Canola cytosol 74.63 74.03
CDX91798 Canola cytosol 20.93 72.02
CDY72648 Canola cytosol 11.02 70.22
Os03t0860700-00 Rice cytosol, plasma membrane 34.31 66.93
VIT_00s0268g00030.t01 Wine grape cytosol 17.07 66.52
VIT_05s0051g00050.t01 Wine grape cytosol 56.17 65.46
CDX68955 Canola cytosol 19.09 63.65
OQU85951 Sorghum cytosol 55.48 63.25
CDY32922 Canola cytosol 54.73 62.97
TraesCS6D01G377100.1 Wheat cytosol 54.44 62.52
TraesCS6B01G431400.1 Wheat cytosol 54.44 62.52
TraesCS6A01G390800.2 Wheat cytosol 54.38 62.45
Zm00001d018481_P033 Maize cytosol 54.96 62.33
CDY64313 Canola cytosol 54.61 62.26
CDX94736 Canola cytosol 54.61 61.98
HORVU6Hr1G091010.24 Barley cytosol 53.98 61.95
CDY32531 Canola endoplasmic reticulum 53.69 61.61
Os02t0816900-01 Rice cytosol, plasma membrane 45.04 61.54
CDY10075 Canola endoplasmic reticulum 53.75 61.52
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 54.44 61.3
Solyc09g091080.2.1 Tomato cytosol 57.32 61.13
KRG89126 Soybean cytosol 55.42 60.78
VIT_16s0115g00220.t01 Wine grape cytosol 9.28 60.3
KXG34975 Sorghum cytosol 49.71 59.78
GSMUA_AchrUn_... Banana cytosol 53.06 59.74
Zm00001d019495_P001 Maize cytosol 51.33 59.1
EER90459 Sorghum cytosol 50.17 58.63
Zm00001d034927_P001 Maize cytosol 50.12 58.17
GSMUA_Achr3P27420_001 Banana cytosol 55.82 58.0
TraesCS1D01G174000.2 Wheat cytosol 50.29 57.79
TraesCS4A01G313500.1 Wheat cytosol 49.48 57.7
TraesCS5B01G566200.1 Wheat cytosol 49.48 57.7
TraesCS1B01G183200.1 Wheat cytosol 50.17 57.62
TraesCS1A01G166900.2 Wheat cytosol 50.17 57.62
HORVU1Hr1G044020.1 Barley cytosol 50.06 57.52
CDY39766 Canola cytosol 48.73 57.48
CDY03315 Canola cytosol 48.67 57.38
TraesCS5D01G558600.1 Wheat cytosol 49.13 57.26
HORVU5Hr1G125430.15 Barley cytosol 48.5 57.13
KRH40872 Soybean cytosol 54.79 56.92
CDX81833 Canola cytosol 47.69 56.45
CDY66597 Canola cytosol 49.13 55.98
CDX95235 Canola cytosol 49.19 55.53
CDY42350 Canola cytosol 48.1 55.49
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 48.44 55.41
CDY31130 Canola cytosol, mitochondrion 49.19 55.39
CDY45087 Canola cytosol 49.13 55.0
CDX70927 Canola cytosol 49.31 54.95
CDY31978 Canola cytosol 48.62 54.81
CDY51846 Canola cytosol 49.37 54.14
CDY05734 Canola cytosol 48.56 53.36
CDX84752 Canola cytosol 47.64 52.91
CDX88973 Canola cytosol 35.81 52.85
CDX79446 Canola cytosol 47.4 52.79
VIT_04s0079g00370.t01 Wine grape cytosol 12.4 52.31
CDY00546 Canola cytosol 35.81 51.71
CDX67724 Canola cytosol 35.47 50.2
CDX98274 Canola nucleus 35.41 49.44
CDY35211 Canola plastid 54.33 49.42
CDY65572 Canola plastid 54.09 49.34
GSMUA_Achr1P03340_001 Banana cytosol 52.13 48.65
CDX93542 Canola cytosol 48.04 48.12
CDX95038 Canola cytosol 46.31 47.46
CDY46128 Canola cytosol 40.95 47.27
CDX72393 Canola cytosol 40.83 47.01
CDY71471 Canola cytosol 12.4 44.33
CDX75338 Canola cytosol 41.52 43.45
CDY69853 Canola endoplasmic reticulum 9.86 35.4
CDY69448 Canola extracellular, golgi, mitochondrion 6.57 34.55
CDX92461 Canola cytosol 8.94 33.48
CDY24591 Canola cytosol, plastid 22.32 33.39
CDY36068 Canola cytosol, mitochondrion 21.45 32.83
CDY42506 Canola cytosol, plastid 21.63 32.64
CDY22791 Canola cytosol, plastid 21.63 32.41
CDY16536 Canola cytosol 8.36 32.29
CDY65579 Canola endoplasmic reticulum 20.93 32.15
CDY29324 Canola cytosol 21.28 32.14
CDX82270 Canola cytosol 21.97 31.86
CDY53932 Canola cytosol, plastid 21.22 31.16
CDY52239 Canola cytosol 21.34 30.91
CDY28777 Canola cytosol 21.28 30.78
CDY18321 Canola cytosol 21.05 30.24
CDY14319 Canola cytosol, plastid 20.76 29.88
CDY25361 Canola cytosol 22.43 25.11
CDX72394 Canola nucleus 0.17 0.3
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078D6H4EnsemblPlants:CDX84695ProteinID:CDX84695ProteinID:CDX84695.1ncoils:Coil
InterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016459
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00141975001InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009
InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:Myosin_NInterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPasePFAM:PF00063PFAM:PF01843PFAM:PF02736PRINTS:PR00193PFscan:PS50096
PFscan:PS51126PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF256SMART:SM00015
SMART:SM00242SMART:SM01132SUPFAM:SSF52540UniParc:UPI0004EE0C5FSEG:seg:
Description
BnaA03g15350D
Coordinates
chrLK031838:+:754837..764557
Molecular Weight (calculated)
196324.0 Da
IEP (calculated)
5.125
GRAVY (calculated)
-0.502
Length
1734 amino acids
Sequence
(BLAST)
0001: MVEKFPGKHL LIGFSGIISN AALGSLVWVE DTDDAWIDGE VVEANDDDVK VICQTKTVVA KANAVYPKDP EFPELGVDDM TKLAYLHEPG VLLNLKARYN
0101: ANEIYTYTGN ILIAVNPFKR LPHLYGNDIM EQYKGSDFGE LSPHPFAVAD SAYRKMINEG VSQAILVSGE SGAGKTESTK MLMQYLAFMG GKAQTEGRSV
0201: EQQVLESNPV LEAFGNAKTV KNNNSSRFGK FVEIQFNHMG RISGAAIRTY LLERSRVCQV SDPERNYHCF YMLCAAPEQE IERYKLGEPS TFHYLNQSNC
0301: YSLSALDDAK EYLATRKAME VVGISSEEQD AIFRTVAAIL HLGNIEFEKG EEADAAEPKD DKSRFHLKVA AELFMCDEKA LEDSLCKRVM VTRGESITKS
0401: LDPGSAALSR DALAKIVYSK LFDWLVTKIN NSIGQDPSSE YIIGVLDIYG FESFKTNSFE QFCINLTNEK LQQHFNQHVF KMEQEEYTKE EIDWSYIEFI
0501: DNQDVLDLIE KKPGGIIALI DEACMFPKST HDTLAQKLYQ TFNGHKRFTK PKLARTDFTI CHYAGDVTYQ TELFLDKNKD YVVREHQALM NSSDCSFVSS
0601: LFPKLRLESS NSSKFSSIGS QFKQQLQSLL ETLNTTEPHY IRCVKPNNVL KPEIFENINV LHQLRCGGVL EAIRISCAGY PTRKPFNEFL TRFRILFPEA
0701: TNKSFDEVDA CKKLLAKVEL KGFQIGKTKV FLRAGQMAEL DAHRSEALGH SARIIQRKVL TYQSRKKYMM LQSASRDIQA FCRGRMARLQ FESMRREAAS
0801: LRIQKQARTY ICQTAYKNLC ISAVYIQTEL RAMAARVELQ YRKKRHAAII IQAITYSTES NQKMSVMKKA AITTQCGWRV KVARRELRKL KMAAKETGAL
0901: QETNTKLEKE LKELTSILEL EKQMRMELEE AKNQEVEELK AALNDMKLQL GETQETKSEE ILKLQSALQD MQLEFEELAK DLEMTHDLAA ENENLKELVS
1001: SLQRKTDESE TNYEETGKQS EKQEVPVIDN DAIIKLEAEN QQLKALVSSL EKKIDALDRK HDETSSNITE QLKESASSDY EIVSDLAAEN ERLKALVSSL
1101: EKENNKKDGS DSSNEQKEEG THMIKEESST EDIDNEMTKK LAAENKELFD LVDLLEKKIV ETEKKYEEAS RLCEERLQKV VDTENKYEEA SKLCEERLQQ
1201: VVEAETKLIE LKTSMQRLEE KVSDMETEDK ILRQQALAHS ASRKMSSQMS FTGPPASLAP IPSRRFGTIS FRRSRIERQP HEYVDVLIKF VSQKVGFSHG
1301: KPVAAFTIYK CLIHWKVFEA EKTSIFDRMV PVFGSAIENP EDNDHLTYWL TNTSTLLFLL QRSLKNHSTS SASPRLPPQP TSFFGRMTQG FRSPSSGSLS
1401: GDVVQQVDAK VPALLFKQQL TAYVETIYGI VQENVKRELE PVLLSCIQGL KDSSNEPSSD DLPAQSSEQN SPAKSSEQNS PAKPSEDKIP PEKLPEGSSP
1501: EKPSEEEDPH AKISEENTPA KSSAENAPEE TWQGIIDLLN RLLGTLQKNY VPLFLAQKIF SQTFQGINVQ VFNSLMQHEC CTFNMGKRVN AFLNELEAWC
1601: SLATEEFVGS SWDELKHTRQ AVVLLVTEQK STITYDDLTT SLCPALSTQQ LYRICTLCKI DDDKDQNVSP DVVSNLKLLI TDEDEDSRSF SLDNDSSIPF
1701: AADEISNCMQ EKEFTNVKAA IELADNPNFH FLKD
Best Arabidopsis Sequence Match ( AT2G33240.4 )
(BLAST)
0001: MVWKHQLIGF SGIFSNVSPA SVKVTVGSQV WVEDPDEAWL DGEVVEANGQ EIKVNCQTKT VVAKVNAVHP KDPEFPELGV DDMTKLAYLH EPGVLLNLKA
0101: RYNANEIYTY TGNILIAVNP FKRLPHLYGN EIMEQYKGTD FGELSPHPFA VADSAYRKMI NEGVSQAILV SGESGAGKTE STKMLMQYLA YMGGKAESEG
0201: RSVEQQVLES NPVLEAFGNA KTVRNNNSSR FGKFVEIQFN HMGRISGAAI RTYLLERSRV CQVSDPERNY HCFYMLCAAP EQETERYQLG KPSTFHYLNQ
0301: SNCHALDAID DSKEYLATRK AMDVVGISPE EQDAIFRVVA AILHLGNIEF AKSEESDGAE PKDDKSRFHL KVAAKLFMCD EKALENSLCN RVMVTRGESI
0401: TKPLDPGSAA LSRDALAKIV YSKLFDWLVT KINNSIGQDS SSKYIIGVLD IYGFESFKTN SFEQFCINLT NEKLQQHFNQ HVFKMEQEEY TKEEIDWSYI
0501: EFIDNQDVLD LIEKKPGGII ALLDEACMFP RSTHDTLAEK LYQTFGSHKR FTKPKLARTD FTICHYAGDV TYQTELFLDK NKDYVVGEHQ SLMNSSDCSF
0601: VSSLFPKSRE ESSKSSKFSS IGSQFKQQLQ SLLETLNTTE PHYIRCVKPN NVLKPEIFEN VNVLHQLRCG GVMEAIRISC AGYPTRKPFN EFLTRFRILA
0701: PEATERSFDE VDACKKLLAR VDLKGFQIGK TKVFLRAGQM AELDAHRAEV LGHSARIIQR KVITYLSRKK YLLLQSASTE IQAFCRGHIA RVQFKATRRE
0801: AASVRIQKQA RTYICQTAFK KLCASAISIQ SGLRAMAARV EFQYRTKRKA AIIIQSQIRR CLCRRRYLRT KKAAITTQCG WRVKVAHREL RKLKMAAKET
0901: GALQDAKTKL EKEVEELTSC LELEKQMRME LEQVKTQEVE DLRSALNDMK LQLGETQVTK SEEILKLQSA LQDMQLEFEE LAKELEMTND LAAENEQLKD
1001: LVSSLQRKID ESDSKYEETS KLSEERVKQE VPVIDQGVII KLEAENQKLK ALVSTLEKKI DSLDRKHDVT SSNISDQLKE SASSDYEMLS NLAAENERLK
1101: ALVSSLENEN YENDGNDSPN EQKEGPQMLK EEILAEDFSI DDEMTNKLAA ENKDLYDLVD LLERKIDETE KKYEEASKLC EERLKQVVDT EKKYEEASRL
1201: CEERLKQVVD TETKLIELKT SMQRLEEKVS DMEAEDKILR QQALRNSASR KMSPQVSFTR PPPVENGHHE SFAPIPSRRF GAMSFRRSQI EQQPHEFVDV
1301: LLKCVSKNVG FSHGKPVAAF TIYKCLIHWK LFEAEKTSVF DRIVPIFGSA IENPEDDSNL AYWLTNTSTL LFLLQRSLKS HSTTGASPKK PPQPTSFFGR
1401: MTQGFRSPSS ASLSGDVVQQ VDARYPALLF KQQLTAYIET IYGIFQENVK RKLAPVLSSC IQGLKDSSHE FSAETLSAES SEQNSPEKPS EENPPEKLSE
1501: DNSSGKLSED YLAAKPSEDN SPAKPSEENS QAKLSEVNPQ AKPSAENSLA KPSEENSPTE TWQDVIGLLN QLLGTLKKNY VPLFLAQKIF CQTFQDINVQ
1601: LFNSLLQREC CTFIMGKKVN VWLNELESWC SQATEDFVGS SWDELKNTRQ ALVLLVTEQK STITYDDLTT NLCPALSTQQ LYRICTLCKI DDHEDQNVSP
1701: DVISNLKLLV TDEDEDSRSF LLDNNSSIPF AADEISNSMQ EKDFTNVKPA VELADNPNFH FLKE
Arabidopsis Description
XI-DMyosin-10 [Source:UniProtKB/Swiss-Prot;Acc:F4IVR7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.