CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75338	Canola	cytosol	96.27	28.06
CDX72393	Canola	cytosol	85.71	27.49
CDY46128	Canola	cytosol	84.89	27.3
AT4G33200.4	Thale cress	cytosol	85.09	26.99
Solyc08g061500.1.1	Tomato	cytosol	55.49	25.72
Os10t0339400-01	Rice	cytosol	30.02	19.89
VIT_04s0008g01990.t01	Wine grape	cytosol	61.9	19.62
Os02t0777700-00	Rice	cytosol	29.61	19.62
Zm00001d014241_P001	Maize	mitochondrion	19.67	19.11
KRH52257	Soybean	cytosol	57.35	18.21
KRH15597	Soybean	cytosol	57.14	18.13
KRH61584	Soybean	cytosol	56.52	17.91
GSMUA_Achr3P07960_001	Banana	cytosol	55.49	16.38
TraesCS6B01G367000.1	Wheat	cytosol	49.07	15.83
HORVU6Hr1G081340.4	Barley	cytosol	49.69	15.79
TraesCS6A01G336500.1	Wheat	cytosol	48.86	15.76
TraesCS6D01G316500.1	Wheat	cytosol	48.86	15.76
Zm00001d052110_P011	Maize	cytosol	49.28	15.66
EES05882	Sorghum	cytosol	48.65	15.46
OQU91854	Sorghum	cytosol	46.58	14.93
CDY71471	Canola	cytosol	13.66	13.61
CDX81833	Canola	cytosol	39.34	12.97
CDY32922	Canola	cytosol	40.37	12.94
CDX94736	Canola	cytosol	40.37	12.76
CDY64313	Canola	cytosol	39.96	12.69
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.75	12.66
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.37	12.66
CDY66597	Canola	cytosol	39.75	12.62
CDY45087	Canola	cytosol	39.75	12.4
CDY32531	Canola	endoplasmic reticulum	38.72	12.38
CDY65579	Canola	endoplasmic reticulum	28.57	12.22
CDY10075	Canola	endoplasmic reticulum	38.1	12.15
CDY42350	Canola	cytosol	37.68	12.11
CDX70927	Canola	cytosol	38.92	12.08
CDY31130	Canola	cytosol, mitochondrion	38.3	12.01
CDX95235	Canola	cytosol	38.1	11.98
CDY51846	Canola	cytosol	38.92	11.89
CDY03315	Canola	cytosol	34.58	11.35
CDY39766	Canola	cytosol	34.37	11.29
CDX84752	Canola	cytosol	35.61	11.02
CDX79446	Canola	cytosol	34.99	10.85
CDY31978	Canola	cytosol	33.13	10.4
CDX95038	Canola	cytosol	35.4	10.11
CDY05734	Canola	cytosol	32.92	10.08
CDX84695	Canola	cytosol	35.4	9.86
CDX88973	Canola	cytosol	23.6	9.7
CDX93542	Canola	cytosol	34.58	9.65
CDY00546	Canola	cytosol	23.81	9.58
CDY19473	Canola	cytosol	34.58	9.54
CDY65572	Canola	plastid	36.02	9.15
CDX67724	Canola	cytosol	23.19	9.14
CDX79520	Canola	endoplasmic reticulum	28.57	9.13
CDX98274	Canola	nucleus	23.4	9.1
CDY17154	Canola	cytosol	34.37	9.08
CDY35211	Canola	plastid	35.82	9.08
CDY15512	Canola	cytosol	32.92	9.06
CDX86626	Canola	cytosol	32.71	9.04
Os10t0395100-01	Rice	cytosol	7.04	7.07
CDY28777	Canola	cytosol	17.18	6.92
CDY52239	Canola	cytosol	16.77	6.77
CDY18321	Canola	cytosol	16.77	6.71
CDY24591	Canola	cytosol, plastid	15.94	6.64
CDY14319	Canola	cytosol, plastid	16.56	6.64
CDY29324	Canola	cytosol	15.32	6.45
CDX82270	Canola	cytosol	15.94	6.44
CDY22791	Canola	cytosol, plastid	15.32	6.4
CDY42506	Canola	cytosol, plastid	15.11	6.35
CDY53932	Canola	cytosol, plastid	14.91	6.1
CDY36068	Canola	cytosol, mitochondrion	13.46	5.74
CDY25361	Canola	cytosol	15.73	4.91
CDY69448	Canola	extracellular, golgi, mitochondrion	2.69	3.94
CDY72648	Canola	cytosol	2.07	3.68
CDX68955	Canola	cytosol	3.11	2.88
Os10t0395150-00	Rice	plasma membrane	2.48	2.2
Solyc08g061520.2.1	Tomato	cytosol	2.07	2.16
Zm00001d014239_P001	Maize	cytosol	1.45	1.4
CDY16536	Canola	cytosol	1.24	1.34
CDX92461	Canola	cytosol	1.24	1.3
CDX91798	Canola	cytosol	1.24	1.19
CDX72394	Canola	nucleus	0.62	0.3

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.20.5.340	Gene3D:3.30.70.3240	MapMan:35.1	GO:A0A078JQJ9	UniProt:A0A078JQJ9
EnsemblPlants:CDY69853	ProteinID:CDY69853	ProteinID:CDY69853.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0016459	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00093068001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IQ_motif_EF-hand-BS	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PFscan:PS50096	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF534
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0004EF30F9	SEG:seg	:	:

Description

BnaC01g40760DBnaC01g40760D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQJ9]

Coordinates

chrLK040500:+:3..3618

Molecular Weight (calculated)

55184.2 Da

IEP (calculated)

10.900

GRAVY (calculated)

-0.401

Length

483 amino acids

Sequence
(BLAST)

001: LILPSFCICV DIIQMNVGVL EAVRISLAGY PTRRYYSDFL DRFGLLAPEF IHESDEQALT EKILRKLGLG NYQLGKTKVF LRAGQIGILD SRRAEVLDAS
101: ARLIQRRLRT FVTHQNFISG RASAISIQAY CRGCLSRNAY ATRRNAAAAV LVQKHARRWL SRCAFVKFVS AALVIQSYIR ADSARLKFAH QKQQRAASVI
201: QARWRMHKFR SAFRHRQSSI IAIQCCWRRK LAKREFRKLK QAANETGALR LAKTKLEKRL EDLEWRLQLE KRLRTSGEEA KSGEVSKLQK TLESFSLKLD
301: AAKLATINEC NKNAVLQKQL DISIKEKAAV VKELNGMVEL EKENTSLKNS MSSLEKKNLA LEKELLSAKT DFNNTLLKLK EAEKRCSELQ TSVQSLEEKL
401: SRLENENHVL RQNTLSLSPK RIGQRVGEKH FNAIVPAQND RRSVFATPTP SKHIMPISHS LSEPRRSKFT AERNLVHIHC LFH

Best Arabidopsis Sequence Match ( AT4G33200.1 )
(BLAST)

0001: MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT
0101: GSILIAVNPF KKLPHLYNGH MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF VGGRATDDDR SVEQQVLESN
0201: PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA
0301: EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS
0401: RDTLAKTVYA HLFDWLVDKI NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK EEINWSYIEF IDNQDVLDLI
0501: EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES
0601: TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ
0701: ALTEKILSKL GLGNYQLGRT KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR NAYATRRNAA AAVLVQKHVR
0801: RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE
0901: KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK
1001: NRVLEKELLN AKTNCNNTLQ KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVLMQKTLIT SPERIGQILG EKHSSAVVPA QNDRRSVFET PTPSKHIMPF
1101: SHSLSESRRS KLTAERNLEN YELLSRCIKE NLGFNDDKPL AACVIYKCLL HWRAFESEST AIFNIIIEGI NEALKGGDEN GVLPYWLSNA SALLCLLQRN
1201: LRSNSFLNAS AQRSGRAAYG VKSPFKLHGP DDGASHIEAR YPALLFKQQL TACVEKIYGL IRDNLKKELS PLLGSCIQAP KASRGIAGKS RSPGGVPQQS
1301: PSSQWESILK FLDSLMSRLR ENHVPSFFIR KLVTQVFSFI NLSLFNSLLL RRECCTFSNG EYVKSGISEL EKWIANAKEE FAGTSWHELN YIRQAVGFLV
1401: IHQKKKKSLD EIRQDLCPVL TIRQIYRIST MYWDDKYGTQ SVSSEVVSQM RVLVDKDNQK QTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS
1501: EYTCAQSLVK KPSIASTSKQ II

Arabidopsis Description

XI-Imyosin, putative [Source:TAIR;Acc:AT4G33200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.