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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014239_P001 Maize cytosol 31.85 96.19
Zm00001d014241_P001 Maize mitochondrion 29.66 89.94
Os10t0395150-00 Rice plasma membrane 31.72 87.71
Os10t0395100-01 Rice cytosol 27.87 87.32
Solyc08g061520.2.1 Tomato cytosol 22.5 73.06
CDX68955 Canola cytosol 24.75 71.73
VIT_04s0008g01990.t01 Wine grape cytosol 65.1 64.37
EES05882 Sorghum cytosol 62.84 62.3
KRH15597 Soybean cytosol 62.64 62.02
KRH52257 Soybean cytosol 62.04 61.47
Bra011426.1-P Field mustard cytosol 61.84 61.44
KRH61584 Soybean cytosol 61.98 61.29
AT4G33200.4 Thale cress cytosol 61.91 61.26
CDY46128 Canola cytosol 60.38 60.59
Bra037016.1-P Field mustard cytosol 60.38 60.42
CDX72393 Canola cytosol 59.79 59.83
CDY69448 Canola extracellular, golgi, mitochondrion 12.74 58.18
Solyc08g061500.1.1 Tomato cytosol 38.62 55.85
CDX75338 Canola cytosol 61.11 55.58
OQU76115 Sorghum cytosol 52.49 53.41
EES03165 Sorghum cytosol 53.09 52.32
OQU85951 Sorghum cytosol 50.5 50.03
KXG34975 Sorghum cytosol 47.05 49.17
EER90459 Sorghum cytosol 48.11 48.85
KXG37557 Sorghum cytosol 50.3 48.71
CDY69853 Canola endoplasmic reticulum 14.93 46.58
EER94044 Sorghum mitochondrion 25.95 32.69
OQU78360 Sorghum cytosol 46.18 32.37
KXG32782 Sorghum cytosol 16.06 31.51
OQU87414 Sorghum cytosol 48.64 30.71
EER99532 Sorghum cytosol 25.15 30.61
CDX72394 Canola nucleus 0.2 0.3
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10UniProt:A0A1Z5S7G4ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674
GO:GO:0003774GO:GO:0003777GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007015
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0016459
GO:GO:0016787InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_head_motor_domEnsemblPlants:OQU91854ProteinID:OQU91854
ProteinID:OQU91854.1InterPro:P-loop_NTPasePFAM:PF00063PFAM:PF01843PRINTS:PR00193PFscan:PS50096
PFscan:PS51126PFscan:PS51456PANTHER:PTHR13140PANTHER:PTHR13140:SF534SMART:SM00015SMART:SM00242
SMART:SM01132EnsemblPlantsGene:SORBI_3001G257800SUPFAM:SSF52540UniParc:UPI000B4246CESEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:30474125..30525429
Molecular Weight (calculated)
172280.0 Da
IEP (calculated)
8.805
GRAVY (calculated)
-0.339
Length
1507 amino acids
Sequence
(BLAST)
0001: MIFRPGTAVW VEHPDLAWAE AEVVSSPASP SSPSSVSVVL STGVKAVVDG RKVLPRDTEG DLAGVDDMTK LVYLHEPGVL CNLALRYTLN EIYTYTGRIL
0101: IAVNPFAKLS HMYDMHMMEQ YRGVQFGELS PHVFAVADAS YRAMVSENCS QSILVSGESG AGKTETTKLI MRYLTFVGGR AIGDIRSVEQ QVLESNPLLE
0201: AFGNARTVRN DNSSRFGKFV EIQFDKSGRI SGAAVRTYLL ERSRVVQVSE SERNYHCFYQ LCASGKDADK YKLAHPRNFY YLNQSHMYEL DGVSDAEEYL
0301: KTRRAMDIVG ICFSDQEAIF RIVAAILHLG NIEFSPGKEF DSSVIKDEKC KFHLQMAADL LMVDASLLLS TLCYRTIKTP EGNIIKAVDS SAAVIGRDTL
0401: AKTVYARLFD WLVDNINKSI GQDMESRSQI GVLDIYGFEC FKYNSFEQLC INFANEKLQQ HFNKHVFKVE QEEYKTEEIN WSYIEFVDNQ DILDLIEKKP
0501: IGIVSLLDEA CMLGKSTHET FAMKLFQNLR AHPRLEKPKL SKTDFALSHF AGKVTYQTDL FLEKNRDYVI AEHQNLLSSS KCSFISGLFA SQQDDPLKSS
0601: YKFSSVASRF KQQLQALMET LSSTEPHYIR CIKPNSLNCP QKFENGSVLQ QLRSGGVLEA IRISLAGYPT RRTYSEFINR FGLLVPEHMD ERFDERSLTQ
0701: RILAQLNLEN FQLGRTKVFL RAGQIAVLDS RRGEILDNAS RIVQGHFRTF TVRKKFLSTR KASISIQIFC RGCLARNVLE AKRQIAAAVS VERYARRWLC
0801: RCSYLHLRSA SLVIQSGIRY ILAVQRLLHL KNAKASTVIQ AWWRMQKLHY FHQQYRRATI LIQCCWRQKL AKRALRNLKH AAYETGALRE AKGKLEKSLE
0901: DLTLRFTLER RQRLATEESK ALEISKLLKI LDSVKSELEA SNEENKNSCK KIASLQRQLD LSSKDQEAQQ NSLSQIEEVK RENILLKAKN TELEQELLKA
1001: QKCSHDNMDK LHDVEKNYVH LRDNLKNLED KISNLEDQNH LLRQKALNLS PRHSRTVSYH CGSSPSSPRP FFESSPVKLA PLPHNQTESR RSRMNSDRYE
1101: DYHDVLQRCI KDDMGFKKGK PVAACIIYKC LLHWGVFEAE RTTIFDFIIH TINTTLKAEN ENDILPYWLA NASALLCMLQ RNLRSKGFIM APSRSSSDTH
1201: LSEKANETFR SPLRAFGQQT SMSHIDARYP AMLFKQQLTA SLEKIFGLIR DNLKKEISPL LSLCIQAPKL ARGGSGRRSR SPDVALQQPI STHWDRIVKF
1301: LDSLMDRLHK NFVPSFFTRK LVTQVFSFIN VQLFNSMLLR RECCTFSNGE YVKSGLCVLE KWIVDTEEHA GAAWDELQFI RQAVDFLIIP QKSKKTLEQI
1401: KKNICPALSV RQIYRLCTMY WDDKYGTHSV SAEVVARMRD MVSNDMQNPV SNSFLLDDDL SIPFTTEEIA EEVPDVDMSN IEMPSSLRHV HSAQFLTQHL
1501: QPSYLSR
Best Arabidopsis Sequence Match ( AT4G33200.1 )
(BLAST)
0001: MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT
0101: GSILIAVNPF KKLPHLYNGH MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF VGGRATDDDR SVEQQVLESN
0201: PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA
0301: EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS
0401: RDTLAKTVYA HLFDWLVDKI NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK EEINWSYIEF IDNQDVLDLI
0501: EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES
0601: TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ
0701: ALTEKILSKL GLGNYQLGRT KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR NAYATRRNAA AAVLVQKHVR
0801: RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE
0901: KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK
1001: NRVLEKELLN AKTNCNNTLQ KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVLMQKTLIT SPERIGQILG EKHSSAVVPA QNDRRSVFET PTPSKHIMPF
1101: SHSLSESRRS KLTAERNLEN YELLSRCIKE NLGFNDDKPL AACVIYKCLL HWRAFESEST AIFNIIIEGI NEALKGGDEN GVLPYWLSNA SALLCLLQRN
1201: LRSNSFLNAS AQRSGRAAYG VKSPFKLHGP DDGASHIEAR YPALLFKQQL TACVEKIYGL IRDNLKKELS PLLGSCIQAP KASRGIAGKS RSPGGVPQQS
1301: PSSQWESILK FLDSLMSRLR ENHVPSFFIR KLVTQVFSFI NLSLFNSLLL RRECCTFSNG EYVKSGISEL EKWIANAKEE FAGTSWHELN YIRQAVGFLV
1401: IHQKKKKSLD EIRQDLCPVL TIRQIYRIST MYWDDKYGTQ SVSSEVVSQM RVLVDKDNQK QTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS
1501: EYTCAQSLVK KPSIASTSKQ II
Arabidopsis Description
XI-Imyosin, putative [Source:TAIR;Acc:AT4G33200]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.