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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g061520.2.1 Tomato cytosol 66.73 74.78
Zm00001d014239_P001 Maize cytosol 69.23 72.14
CDX91798 Canola cytosol 62.31 64.29
Os10t0395150-00 Rice plasma membrane 66.73 63.67
CDY72648 Canola cytosol 30.38 58.09
CDY46128 Canola cytosol 90.19 31.23
CDX72393 Canola cytosol 90.0 31.08
AT4G33200.4 Thale cress cytosol 90.38 30.86
CDX75338 Canola cytosol 97.5 30.6
VIT_04s0008g01990.t01 Wine grape cytosol 80.77 27.56
KRH52257 Soybean cytosol 79.42 27.15
CDX88973 Canola cytosol 61.15 27.06
KRH61584 Soybean cytosol 79.23 27.03
KRH15597 Soybean cytosol 78.08 26.68
CDY00546 Canola cytosol 61.15 26.48
TraesCS6B01G367000.1 Wheat cytosol 74.42 25.85
CDX67724 Canola cytosol 60.77 25.8
TraesCS6A01G336500.1 Wheat cytosol 74.23 25.78
TraesCS6D01G316500.1 Wheat cytosol 74.04 25.72
EES05882 Sorghum cytosol 74.42 25.46
HORVU6Hr1G081340.4 Barley cytosol 74.42 25.46
CDX98274 Canola nucleus 60.58 25.36
Zm00001d052110_P011 Maize cytosol 74.04 25.33
OQU91854 Sorghum cytosol 71.73 24.75
GSMUA_Achr3P07960_001 Banana cytosol 75.38 23.96
CDX81833 Canola cytosol 65.58 23.28
CDY66597 Canola cytosol 66.35 22.67
CDY32922 Canola cytosol 65.0 22.43
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.38 22.43
CDY45087 Canola cytosol 66.54 22.34
CDY64313 Canola cytosol 65.19 22.29
CDX94736 Canola cytosol 65.19 22.19
CDX70927 Canola cytosol 65.96 22.04
CDY32531 Canola endoplasmic reticulum 64.04 22.04
CDY10075 Canola endoplasmic reticulum 64.04 21.98
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.0 21.95
CDX95235 Canola cytosol 64.81 21.94
CDY51846 Canola cytosol 66.35 21.82
CDX79520 Canola endoplasmic reticulum 63.27 21.76
CDY31130 Canola cytosol, mitochondrion 63.85 21.56
CDY39766 Canola cytosol 60.77 21.5
CDY03315 Canola cytosol 60.77 21.48
CDY42350 Canola cytosol 61.73 21.36
CDX79446 Canola cytosol 63.46 21.19
CDX84752 Canola cytosol 63.46 21.14
CDY29324 Canola cytosol 45.58 20.64
CDY42506 Canola cytosol, plastid 45.38 20.54
CDY31978 Canola cytosol 60.58 20.48
CDY24591 Canola cytosol, plastid 45.38 20.36
CDY22791 Canola cytosol, plastid 45.0 20.22
CDY36068 Canola cytosol, mitochondrion 44.04 20.21
CDY53932 Canola cytosol, plastid 45.19 19.9
CDY05734 Canola cytosol 60.19 19.84
CDX93542 Canola cytosol 65.38 19.64
CDX82270 Canola cytosol 44.62 19.4
CDX95038 Canola cytosol 62.69 19.27
CDX84695 Canola cytosol 63.65 19.09
CDY28777 Canola cytosol 43.65 18.93
CDY52239 Canola cytosol 43.46 18.88
CDX86626 Canola cytosol 62.31 18.54
CDY18321 Canola cytosol 42.88 18.48
CDY15512 Canola cytosol 62.31 18.46
CDY19473 Canola cytosol 62.12 18.45
CDY14319 Canola cytosol, plastid 42.69 18.42
CDY17154 Canola cytosol 62.31 17.72
CDY65572 Canola plastid 64.04 17.52
CDY35211 Canola plastid 64.04 17.47
CDY25361 Canola cytosol 45.19 15.17
CDY69853 Canola endoplasmic reticulum 2.88 3.11
CDY69448 Canola extracellular, golgi, mitochondrion 1.35 2.12
CDY65579 Canola endoplasmic reticulum 4.42 2.04
CDX92461 Canola cytosol 1.35 1.51
Os10t0339400-01 Rice cytosol 2.12 1.51
Os02t0777700-00 Rice cytosol 2.12 1.51
Solyc08g061500.1.1 Tomato cytosol 2.69 1.34
Zm00001d014241_P001 Maize mitochondrion 1.15 1.21
CDY16536 Canola cytosol 0.96 1.11
Os10t0395100-01 Rice cytosol 0.96 1.04
CDY71471 Canola cytosol 0.58 0.62
CDX72394 Canola nucleus 0.58 0.3
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.1Gene3D:3.40.850.10GO:A0A078BVX8
EnsemblPlants:CDX68955ProteinID:CDX68955ProteinID:CDX68955.1GO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016459GO:GO:0016787GO:GO:0051015EnsemblPlantsGene:GSBRNA2T00130701001InterPro:IPR001609
InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961InterPro:Kinesin_motor_dom_sfInterPro:Myosin_NInterPro:Myosin_S1_N
InterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF02736PRINTS:PR00193PFscan:PS51456
PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF534SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EEA5BE
Description
BnaC01g04980D
Coordinates
chrLK031789:-:2188902..2194380
Molecular Weight (calculated)
59286.0 Da
IEP (calculated)
5.405
GRAVY (calculated)
-0.423
Length
520 amino acids
Sequence
(BLAST)
001: MDTNLRKGDK VWVEDKDLAW IPGEVLDSSG SKVHVETSTG KKVSVATEKL FRRDPDDEEH NGVDDMTKLT YLHEPGVLSN LQRRYALNDI YTYTGSILIA
101: VNPFKKLPHL YNAYMMEQYK GAPFGELSPH VFAVSEVAYR AMIDDSRSQS ILVSGESGAG KTETTKLIMQ YLTFVGGRAA VDDRSVEQQV LESNPLLEAF
201: GNAKTVRNDN SSRFGKFVEI QFDANGRISG AAIRTYLLER SRVVRVTDPE RNYHCFYQLC ASGNDADKYK LSNPRQFHYL NQSKTYELEG VSNAEEYKNT
301: RRAMDIVGIS HDEQEGIFRT LAAILHLGNV EFSPGKEHDS SVVKDQESRI HLEMAADLFK CDPNLLLASL CTRSILTREG PIIKALDCNA AVTSRDALAK
401: TVYARLFDWL VDKINRSVGQ DPNSRFKIGV LDIYGFECFK SNSFEQFCIN FANEKLQQHF NEHVFKMEQD EYRKEEINWS YIEFVDNQDV LDLIEKVRFS
501: MFQLDLYLTL YSNSLPLNLL
Best Arabidopsis Sequence Match ( AT1G08730.2 )
(BLAST)
0001: MGTPVNIIVG SHVWFEDPEV AWIDGEVEKI NGQEVVIQAT TGKKVTAKLS KIYPKDVEAP AGGVDDMTKL SYLHEPGVLQ NLKIRYELNE IYTYTGNILI
0101: AINPFQRLPH IYDAHMMQQY KGAPLGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEEIEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYL
0301: ATRRAMDIVG ISEKEQEAIF RVVAAILHIG NIDFTKGKEV DSSVPKDEKS KFHLKTAAEL LMCDLKALED ALCKRVMITP EEVIKRSLDP QSAVTSRDGL
0401: AKTVYSRLFD WLVDKINKSI GQDANSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NCTEPHYIRC VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG NFDEKVACQK
0701: ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR
0801: KSYKKLHVAS LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA KRELRKLKMA ARETGALKEA KDMLEKKVEE
0901: LTYRVQLEKR SRGDLEEAKT QEILKLKSSF EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE NEKQRADDAV
1001: RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE
1101: VEDKPQKSLN EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MSQSFRGAPP GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC IQAPRTSRAS
1301: LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG
1401: SSWDELKHIR QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS IPFSVDDLSK
1501: SMEKFEIADI EPPPLIRENS GFSFLLPVSE
Arabidopsis Description
XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.