CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29324	Canola	cytosol	95.26	98.0
CDY22791	Canola	cytosol, plastid	87.13	88.94
CDY42506	Canola	cytosol, plastid	86.45	88.86
AT1G50360.1	Thale cress	cytosol	83.83	85.86
CDY24591	Canola	cytosol, plastid	79.93	81.45
CDY36068	Canola	cytosol, mitochondrion	75.61	78.82
CDX82270	Canola	cytosol	78.58	77.59
KRG90612	Soybean	cytosol	72.23	72.91
KRH36145	Soybean	cytosol	72.4	72.7
VIT_10s0071g00210.t01	Wine grape	plastid	72.57	72.63
Solyc02g020910.2.1	Tomato	nucleus	70.7	72.17
KRG89103	Soybean	cytosol	71.13	71.43
KRH40907	Soybean	cytosol	70.19	70.85
Os10t0488800-01	Rice	cytosol	56.31	70.0
HORVU1Hr1G043440.4	Barley	cytosol	62.66	65.54
Zm00001d013967_P004	Maize	mitochondrion	65.2	64.49
Zm00001d032637_P004	Maize	mitochondrion	64.94	64.4
EER94044	Sorghum	mitochondrion	64.94	64.13
TraesCS1B01G179500.2	Wheat	mitochondrion	63.93	63.23
TraesCS1D01G159600.1	Wheat	mitochondrion	63.67	63.14
TraesCS1A01G162800.1	Wheat	mitochondrion	63.76	62.85
GSMUA_Achr1P01870_001	Banana	cytosol	67.23	62.62
CDY25361	Canola	cytosol	78.92	60.17
GSMUA_Achr2P10680_001	Banana	cytosol	62.57	58.56
CDY52239	Canola	cytosol	51.57	50.88
CDY28777	Canola	cytosol	50.97	50.21
CDY14319	Canola	cytosol, plastid	51.06	50.04
CDY18321	Canola	cytosol	50.97	49.88
CDX68955	Canola	cytosol	19.9	45.19
CDX91798	Canola	cytosol	18.46	43.25
CDY72648	Canola	cytosol	9.23	40.07
CDX88973	Canola	cytosol	28.96	29.11
CDY00546	Canola	cytosol	28.87	28.39
CDX67724	Canola	cytosol	28.37	27.35
CDX98274	Canola	nucleus	28.54	27.13
CDX81833	Canola	cytosol	33.11	26.69
CDY32922	Canola	cytosol	33.19	26.01
CDY64313	Canola	cytosol	33.28	25.84
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.11	25.79
CDX94736	Canola	cytosol	33.19	25.65
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.19	25.45
CDY66597	Canola	cytosol	32.77	25.43
CDY03315	Canola	cytosol	31.58	25.36
CDY39766	Canola	cytosol	31.5	25.31
CDY32531	Canola	endoplasmic reticulum	32.35	25.28
CDY10075	Canola	endoplasmic reticulum	32.26	25.15
CDY45087	Canola	cytosol	32.85	25.05
CDX70927	Canola	cytosol	32.94	25.0
CDX95235	Canola	cytosol	32.43	24.93
CDY42350	Canola	cytosol	31.58	24.82
CDY46128	Canola	cytosol	31.5	24.77
CDX72393	Canola	cytosol	31.5	24.7
CDY51846	Canola	cytosol	32.85	24.54
CDY31130	Canola	cytosol, mitochondrion	31.58	24.22
CDY31978	Canola	cytosol	31.16	23.93
CDX84752	Canola	cytosol	31.5	23.83
CDX79446	Canola	cytosol	31.41	23.83
CDY05734	Canola	cytosol	31.5	23.57
CDX79520	Canola	endoplasmic reticulum	30.06	23.48
CDX75338	Canola	cytosol	31.58	22.51
CDX84695	Canola	cytosol	31.16	21.22
CDX93542	Canola	cytosol	31.08	21.2
CDY15512	Canola	cytosol	31.5	21.2
CDX86626	Canola	cytosol	31.24	21.11
CDX95038	Canola	cytosol	30.23	21.1
CDY19473	Canola	cytosol	30.82	20.79
CDY65572	Canola	plastid	32.43	20.15
CDY35211	Canola	plastid	32.35	20.04
CDY17154	Canola	cytosol	30.91	19.97
CDY69853	Canola	endoplasmic reticulum	6.1	14.91
CDY71471	Canola	cytosol	3.39	8.25
CDY65579	Canola	endoplasmic reticulum	7.87	8.24
CDY16536	Canola	cytosol	2.79	7.35
CDX92461	Canola	cytosol	2.71	6.91
CDY69448	Canola	extracellular, golgi, mitochondrion	1.69	6.06
CDX72394	Canola	nucleus	0.08	0.1

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078IVC2	UniProt:A0A078IVC2	EnsemblPlants:CDY53932	ProteinID:CDY53932	ProteinID:CDY53932.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	EnsemblPlantsGene:GSBRNA2T00011713001	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8
InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0004EEBB7E	SEG:seg	:

Description

BnaCnng25790DBnaCnng25790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVC2]

Coordinates

chrLK033252:+:60527..67595

Molecular Weight (calculated)

133250.0 Da

IEP (calculated)

8.909

GRAVY (calculated)

-0.402

Length

1181 amino acids

Sequence
(BLAST)

0001: MSEKAKPFVQ SLKSMPADYR FLGSSPLEDS SSSGSSVPVT IPRNGHLKNG AVGGVDSAND DSPYGLQSIS NGDESSLVDE DPIVPLPESN DRRWSDTSVY
0101: ARKKALQFWV QLPNGNWELG KVLSTSGSGE ESVIKLPEGN VLKVISETLV PANPDILDGV DDLMQLSYLN EPSVLYNLEY RYNQDMIYTK AGPVLVAVNP
0201: FKEVPLYGDS NIEAYRKRSN QSPHVYAIAD TAIREMIRDE VNQSIIISCY IHSLSILPAN ISASIEFIYG AGKTETAKIA MQYLASLGGG SGIENEILKT
0301: NPILEAFGNA KTLRNDNSSR FGKLIEIHFS ETRKISGAKI QTFLLEKSRV VQCAEGERSY HIFYQLCAGA SPALREKLNL TSAKEYNYLR QSNCYSIKGV
0401: DDAERFQAVQ EALDIVHVSK DDQESVFAML AAVLWLGNVS FSIIDNENHA EPESDESNGF WLFQILLLNI CLSTVARLIG CNINDLKLAL SKRNIKVRNE
0501: TFVQKLTLSQ AIDARDALAK SIYACLFDWL VEQINKSLAV GKRRTGRSIS ILDIYGFESF NKNSFEQFCI NYANERLQQH FNRHLFKLEQ EEYIKDGIDW
0601: TRVDFEDNQT CLRLFEKKPL GLLSLLDEES TFPNGTDLTL ANKLKEHLSD NSCFRGDRGK TFTVAHYAGE VTYETTGFLE KNRDLLHSDS IKLLSSCSRH
0701: LPQAFASSML VHSEKPVVGP LHKAGGPDSQ RLSVATKFKG QLFELMQRLG KTTPHFIRCI KPNSVQSPGL YEQELVLQQL RCCGVLEVVR ISRSGFPTRM
0801: SHQKFALRYG FLLLESIAAK DPLSVSVAIL HQFNILPEMY QVGYTKLFFR TGQIGVLEDT RNRTLHGILR LQSCFRGHQA RSRLREFKRG ITALQSFIRG
0901: EKIRKDYTEL LRRHRACSAI QSYVKSRIAK RQYKAKVDAS LVIQSAIRGE LVRRCGGDIK YGGTKRNESG EVLVQASVLS ELQRRVLRTE AALREKEEEN
1001: DILRQRLQQY DNRWSEYETK MKSMEEIWQK QIRSLQSSLS IAKRSLNVEG SPRYSDASVN ASDASDFSVS GDFRTPGRSG SVGLSVISRL AEEFGQRAQV
1101: FGDDTKFLME VKSGKVEANL SPERELRRLK QMFETWKKDY GRRLRETKTI LSRLGNEETG GSPLVERVKT KWWGRLRSTR F

Best Arabidopsis Sequence Match ( AT1G50360.1 )
(BLAST)

0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY

Arabidopsis Description

VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.