Factsheet for Zm00001d013967_P004

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94044	Sorghum	mitochondrion	94.81	94.65
Zm00001d032637_P004	Maize	mitochondrion	93.97	94.21
Os10t0488800-01	Rice	cytosol	73.12	91.89
HORVU1Hr1G043440.4	Barley	cytosol	83.75	88.57
TraesCS1B01G179500.2	Wheat	mitochondrion	87.02	87.02
TraesCS1D01G159600.1	Wheat	mitochondrion	86.77	86.99
TraesCS1A01G162800.1	Wheat	mitochondrion	86.85	86.56
Bra001768.1-P	Field mustard	cytosol	66.83	70.25
Bra035834.1-P	Field mustard	cytosol	67.0	69.44
VIT_10s0071g00210.t01	Wine grape	plastid	68.26	69.07
KRG90612	Soybean	cytosol	67.59	68.97
CDY24591	Canola	cytosol, plastid	66.83	68.85
Solyc02g020910.2.1	Tomato	nucleus	66.67	68.8
KRH36145	Soybean	cytosol	67.67	68.71
CDY42506	Canola	cytosol, plastid	65.58	68.15
Bra018844.1-P	Field mustard	cytosol	65.75	68.14
CDY22791	Canola	cytosol, plastid	66.0	68.11
CDY36068	Canola	cytosol, mitochondrion	64.57	68.05
GSMUA_Achr1P01870_001	Banana	cytosol	71.94	67.74
KRG89103	Soybean	cytosol	66.67	67.69
KRH40907	Soybean	cytosol	66.16	67.52
CDY29324	Canola	cytosol	64.82	67.42
Bra039641.1-P	Field mustard	cytosol	64.82	67.42
AT1G50360.1	Thale cress	cytosol	64.91	67.22
CDX82270	Canola	cytosol	67.0	66.89
AT3G19960.2	Thale cress	cytosol, plastid	64.99	65.99
CDY53932	Canola	cytosol, plastid	64.49	65.2
GSMUA_Achr2P10680_001	Banana	cytosol	66.33	62.76
CDY25361	Canola	cytosol	66.83	51.52
Zm00001d006593_P003	Maize	cytosol	52.51	50.52
Zm00001d021785_P002	Maize	cytosol, plastid	47.74	47.98
Zm00001d014239_P001	Maize	cytosol	18.43	44.09
Zm00001d038844_P001	Maize	cytosol	20.77	39.37
Zm00001d044303_P003	Maize	plasma membrane	33.42	26.1
Zm00001d034927_P001	Maize	cytosol	32.24	25.77
Zm00001d052110_P011	Maize	cytosol	32.58	25.59
Zm00001d019495_P001	Maize	cytosol	32.16	25.5
Zm00001d018481_P033	Maize	cytosol	32.58	25.44
Zm00001d044819_P002	Maize	cytosol	32.33	25.25
Zm00001d013276_P005	Maize	cytosol	30.74	23.57
Zm00001d043667_P003	Maize	endoplasmic reticulum	28.89	17.26
Zm00001d011713_P003	Maize	endoplasmic reticulum	29.48	14.88
Zm00001d011197_P007	Maize	cytosol	6.11	9.49
Zm00001d038845_P002	Maize	nucleus	9.3	7.85
Zm00001d014241_P001	Maize	mitochondrion	2.6	6.24

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	UniProt:A0A1D6GNZ1	ProteinID:AQK64921.1	ProteinID:AQK64926.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456
PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF312	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540
UniParc:UPI000220FB12	EnsemblPlantsGene:Zm00001d013967	EnsemblPlants:Zm00001d013967_P004	EnsemblPlants:Zm00001d013967_T004	SEG:seg	:

Description

Myosin-3

Coordinates

chr5:-:26610074..26621133

Molecular Weight (calculated)

134104.0 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.420

Length

1194 amino acids

Sequence
(BLAST)

0001: MASVEVRSVR KSTALRARGG PSKLQSARSM PLDYRYSDGP SAANGAGGGP AGNGVGRRAV AVEAGKEEKE GEVVRLEGDD ADSPYSSNVV TAEEEAGNTG
0101: GGGDEVDSAA AATPRRLSPR AAASPTQVDA RWGDTSSYGA KKKHRVFCQL RNGDWALCTV LATSGDESVL KVSEGKVLRL KTESLQPANP EILDGVDDLM
0201: QLSYLSEPSV LYNLQYRYSQ DMIYTKAGPV LVAVNPFKKV SLYGNEYIDA YRNKSMDSPH VYAIADAALC EMKRDEVNQS IIISGESGAG KTETAKIAMQ
0301: YLASLGGGSG IEYEILQTNP ILEAFGNAKT LRNDNSSRFG KLIEIHFSTT GRICGAMIQT FLLEKSRVVQ CAVGERSYHI FYQLCAGAPA SLREKLNLKK
0401: VDEYKYLKQS CCYSIAGVDD AQMFRTVTEA MDIVHISKED QENVFAMVSA VLWLGDVSFT VIDNENHVEI IADEASKMVA ELLGCSIEDL NLALTKRHMK
0501: VNNENIVQKL TLAQATDTRD ALAKSLYASL FEWLVEQINK SLSVGKRRTG RSISILDIYG FESFDKNSFE QFCINYANER LQQHFNRHLF KLEQEEYVED
0601: GIDWAKVDFE DNQDCLSLFE KKPLGLLSLL DEESTFPNAT DLTFANKLKQ HLNSNSCFRG ERDKGFAVRH YAGEVAYDTS GFLEKNRDLL HMDSIQLLAK
0701: CKTFLPKMFA SKMLVQPDDS MSVPYRSSAA DSQKLSVAMK FKGQLFQLMQ RLESTTPHFI RCIKPNNLQL PAIYEQGLVL QQLKCCGVLE VVRISRSGYP
0801: TRMTHQKFAR RYGFLLLEDV ASQDPLSVSV AILHQFNILP EMYQVGYTKL FFRTGQIGKL EDTRNRTLHG ILRVQSCFRG HQARHHARER IRGVLALQTF
0901: IRGEKARQIY SSLLRKHRAA VILQSNLRCW LARRYFINVR KASVIIQSGI RGSLVRRCNG NIDLINVLRE FESKQEAEGD QILIKASVLA ELQRRILKAE
1001: ATVREKEEEN ETLHQRLQQY ENRWLEYEQK MKAMEEMWQK QMRSLQSSLS VAKKSLALHE TPRMSDSSVD QSWESNGNHV SSGSQLVPRT GGREMSAGLS
1101: VIGRLAEEFE QRSQVFADDA KFLVEVKSGQ ADASLNPDME LRRLKHNFDS WKKDFSGRIR ETKMILNKLG NGNESSPNSV KRKWWGRLNT SKFS

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.