Factsheet for Zm00001d034927_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT1G04600.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90459	Sorghum	cytosol	96.72	97.37
Os03t0860700-00	Rice	cytosol, plasma membrane	51.74	86.95
HORVU5Hr1G125430.15	Barley	cytosol	81.39	82.61
TraesCS5B01G566200.1	Wheat	cytosol	81.73	82.11
TraesCS5D01G558600.1	Wheat	cytosol	81.73	82.06
TraesCS4A01G313500.1	Wheat	cytosol	81.66	82.04
Zm00001d019495_P001	Maize	cytosol	78.65	78.02
VIT_00s0268g00030.t01	Wine grape	cytosol	19.54	65.62
PGSC0003DMT400056647	Potato	cytosol	66.33	65.46
Solyc09g064200.2.1	Tomato	plastid	66.27	65.39
Zm00001d018481_P033	Maize	cytosol	66.73	65.21
VIT_05s0051g00050.t01	Wine grape	cytosol	64.59	64.85
Solyc06g008090.2.1	Tomato	cytosol	64.39	64.82
Zm00001d038844_P001	Maize	cytosol	27.31	64.76
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.8	64.76
KRH19659	Soybean	cytosol	65.53	64.45
KRH32270	Soybean	cytosol	65.19	64.33
KRG95788	Soybean	cytosol	65.19	64.21
KRH67505	Soybean	cytosol	64.93	64.15
AT1G04160.1	Thale cress	cytosol	63.79	63.53
CDY32922	Canola	cytosol	63.79	63.24
Bra032526.1-P	Field mustard	cytosol	63.65	63.23
Bra011053.1-P	Field mustard	cytosol	63.52	63.01
CDY10075	Canola	endoplasmic reticulum	63.86	62.97
CDY32531	Canola	endoplasmic reticulum	63.59	62.87
CDY64313	Canola	cytosol	63.79	62.66
Bra027512.1-P	Field mustard	cytosol	51.54	62.6
CDX94736	Canola	cytosol	63.86	62.43
AT4G28710.1	Thale cress	cytosol	62.99	62.07
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.79	61.88
Zm00001d014239_P001	Maize	cytosol	20.62	61.72
AT5G43900.3	Thale cress	cytosol	64.26	61.34
AT2G20290.1	Thale cress	endoplasmic reticulum	60.37	60.42
Bra036688.1-P	Field mustard	cytosol	58.23	60.21
CDY39766	Canola	cytosol	58.43	59.39
CDY03315	Canola	cytosol	58.3	59.21
Zm00001d044303_P003	Maize	plasma membrane	60.58	59.19
Zm00001d044819_P002	Maize	cytosol	60.24	58.86
KRG89126	Soybean	cytosol	61.78	58.38
Bra036460.1-P	Field mustard	cytosol	57.7	57.93
Solyc09g091080.2.1	Tomato	cytosol	62.78	57.69
Bra033704.1-P	Field mustard	cytosol, plastid	63.86	57.54
VIT_16s0115g00220.t01	Wine grape	cytosol	10.11	56.55
CDY31978	Canola	cytosol	57.76	56.11
PGSC0003DMT400038143	Potato	cytosol	31.79	55.75
KRH40872	Soybean	cytosol	61.71	55.24
CDY05734	Canola	cytosol	57.83	54.75
Zm00001d013276_P005	Maize	cytosol	56.09	53.82
VIT_04s0079g00370.t01	Wine grape	cytosol	14.26	51.82
GSMUA_Achr1P03340_001	Banana	cytosol	64.39	51.78
AT1G04600.1	Thale cress	cytosol	59.84	51.68
CDX79520	Canola	endoplasmic reticulum	51.81	51.19
CDY15512	Canola	cytosol	59.64	50.77
CDX86626	Canola	cytosol	59.24	50.63
Bra030576.1-P	Field mustard	cytosol	56.89	50.27
Zm00001d052110_P011	Maize	cytosol	51.0	50.13
CDX84695	Canola	cytosol	58.17	50.12
AT2G33240.1	Thale cress	cytosol	59.3	50.06
CDY65572	Canola	plastid	63.45	49.87
CDY19473	Canola	cytosol	58.37	49.8
CDY35211	Canola	plastid	63.25	49.58
CDY17154	Canola	cytosol	58.43	47.76
Zm00001d032637_P004	Maize	mitochondrion	25.84	32.41
Zm00001d013967_P004	Maize	mitochondrion	25.77	32.24
Zm00001d011713_P003	Maize	endoplasmic reticulum	50.74	32.05
Zm00001d011197_P007	Maize	cytosol	16.06	31.21
Zm00001d014241_P001	Maize	mitochondrion	10.37	31.19
Zm00001d043667_P003	Maize	endoplasmic reticulum	41.03	30.67
Zm00001d006593_P003	Maize	cytosol	25.17	30.3
Zm00001d021785_P002	Maize	cytosol, plastid	23.43	29.46
Zm00001d038845_P002	Maize	nucleus	23.96	25.32

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:103644344	MapMan:20.2.4.1
Gene3D:3.30.70.3240	Gene3D:3.40.850.10	UniProt:A0A1D6LCG3	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007015	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016459	GO:GO:0016787	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N
InterPro:Myosin_head_motor_dom	ProteinID:ONM11764.1	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843
PFAM:PF02736	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844
PANTHER:PTHR13140	PANTHER:PTHR13140:SF697	SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540
UniParc:UPI00022169EF	EnsemblPlantsGene:Zm00001d034927	EnsemblPlants:Zm00001d034927_P001	EnsemblPlants:Zm00001d034927_T001	SEG:seg	:

Description

Myosin-6

Coordinates

chr1:-:305714286..305755064

Molecular Weight (calculated)

169364.0 Da

IEP (calculated)

7.711

GRAVY (calculated)

-0.400

Length

1494 amino acids

Sequence
(BLAST)

0001: MASKSRFVVG SHVWVEDPDE AWMDGLVEQI NGDELVVNCT SGKKVTANVS SAYPKDTESP RGGVEDMTRL AYLHEPGVLQ NLKSRFMLNE IYTYTGNILI
0101: AVNPFQRLPH LYNNDMMGIY KGAEFGELSP HPFAIADRSY RLMINDHISQ AILVSGESGA GKTESTKSLM QYLAFMGGKP QAEGRSVQQQ ILESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDANGKIS GAAIRTYLLE RSRVCQISDP ERNYHCFYML CSAPPEDCKK YKLGDPRSFH YLNQSNCIAL DGLDDSKEYT
0301: ETRRAMGIVG MSTDEQDAIF RVVAAILHLG NIEFAEGSED DSSVPKDEKS QFHLKTAAEL FMCDEKGLEE SLCKRVMATR GESITKNLDP RAAALSRDAL
0401: SRIVYSRLFD WIVNKINSSI GQDPDSKILI GVLDIYGFES FLTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEID WSYIQFVDNQ EILDLIEKKP
0501: GGIIALLDET CMLRNSTHET FAEKLYQKFK DNPHFSKPKF SRSGFTVHHY AGNVTYQTDL FLDKNIDYAV NEHQVLLNAS KCSFVSSLFP PCEESTKSTK
0601: FTSIGSSFKQ QLQSLLETLS ATEPHYIRCI KPNNVLKPAI FENSNVLQQL RCGGVLEAIR ISCLGYPTRR TFYEFVNRFG ILQPKVLGRS HDEVTAAKML
0701: LDKANLAGYQ IGKTKVFLRA GQMAELDALR TEVLGLSAKK IQSKLRSFLA RKKYIELQQC ATQIQAICRG TTARRRYENL RRDVASLKMQ TCYRMHYARK
0801: NYVEICSAST NIQSGLRGMG ARIKLRLKRQ TKAAVIIQSR CRCYLVRSRY VRLVKATITA QCGWRRRVAR KELRNLKMAA KETGALQAAK SKLEKEVEEL
0901: TWRLQLEKRI RADLEEAKSQ ENKKLQLQLQ ELQLQLKDTK DLLKREHEAA KEASEKAAAV PEILADTAQV NELTAENEKL KSLVASFEEK LQNAEQKFEE
1001: TEKAREELVK KATDAESKIN ELKNTMQSLQ EKLTSTEAEN HVLRQQSMKA RPDNMPLLNM HRKSNLANGS LHSDEQTPHG TPMEFGRRSI IERHNESVDA
1101: LINCVVENVG FSEGKPVAAI TIYKCLLHWR IFETDKTNVF DRLIQIFGSA MQKQDNNADL AYWLSNSSSL LIILQKSLKP PGSSVTTPMK RPQTQTSFLG
1201: RMGFRASSIT VDMDLVRQVE AKYPALLFKQ QLTAFVEGLY GMIRDNVKKE ISSVISLVIQ VTPSIESHPQ APRNAKAGLI TDQGSYWQTI VKHLNDLLEI
1301: LQENCVPTVF ARKIFTQIFS FINAQLLNSL LVRRECCSFS NGEYVKQGLD ELETWCTVAK PEYAGSAWDE LKHICQAVGF LVIFKKFRIS YDEIISDLCP
1401: VLSVQQIYKI CTQYWDDKYN TESVSEEVLD EMKKVVNEGS GQGTSSDNTF LLNEEISLPL SLEEIANSMD AKEFQNVSPP QELLDNAAFQ FLRS

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.