Factsheet for PGSC0003DMT400038143

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g008090.2.1	Tomato	cytosol	97.42	55.93
PGSC0003DMT400028274	Potato	cytosol	45.42	51.95
PGSC0003DMT400056647	Potato	cytosol	82.39	46.37
Os02t0816900-01	Rice	cytosol, plasma membrane	68.43	45.94
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.7	42.49
KRH19659	Soybean	cytosol	71.83	40.29
KRH32270	Soybean	cytosol	71.36	40.16
KRH67505	Soybean	cytosol	70.19	39.55
KRG95788	Soybean	cytosol	69.37	38.96
OQU85951	Sorghum	cytosol	68.9	38.59
HORVU6Hr1G091010.24	Barley	cytosol	68.08	38.39
TraesCS6A01G390800.2	Wheat	cytosol	67.61	38.15
TraesCS6D01G377100.1	Wheat	cytosol	67.61	38.15
CDY32922	Canola	cytosol	67.25	38.02
TraesCS6B01G431400.1	Wheat	cytosol	67.25	37.95
Zm00001d018481_P033	Maize	cytosol	67.72	37.74
Bra011053.1-P	Field mustard	cytosol	66.55	37.65
CDY64313	Canola	cytosol	67.14	37.61
CDX94736	Canola	cytosol	67.14	37.43
AT1G04160.1	Thale cress	cytosol	65.49	37.2
AT4G28710.1	Thale cress	cytosol	65.96	37.07
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.9	37.01
Bra027512.1-P	Field mustard	cytosol	53.17	36.83
AT5G43900.3	Thale cress	cytosol	67.49	36.74
GSMUA_AchrUn_...	Banana	cytosol	66.31	36.69
Bra032526.1-P	Field mustard	cytosol	64.67	36.64
CDY10075	Canola	endoplasmic reticulum	64.67	36.37
CDY32531	Canola	endoplasmic reticulum	64.44	36.33
GSMUA_Achr3P27420_001	Banana	cytosol	69.72	35.59
KXG34975	Sorghum	cytosol	59.27	35.02
Bra033704.1-P	Field mustard	cytosol, plastid	66.9	34.38
TraesCS1A01G166900.2	Wheat	cytosol	59.27	33.44
TraesCS1D01G174000.2	Wheat	cytosol	58.92	33.27
TraesCS1B01G183200.1	Wheat	cytosol	58.92	33.24
HORVU1Hr1G044020.1	Barley	cytosol	58.8	33.2
Zm00001d019495_P001	Maize	cytosol	58.22	32.93
AT2G20290.1	Thale cress	endoplasmic reticulum	57.63	32.89
Bra036688.1-P	Field mustard	cytosol	55.52	32.73
CDY03315	Canola	cytosol	56.22	32.56
CDY39766	Canola	cytosol	56.1	32.52
EER90459	Sorghum	cytosol	55.75	32.01
Bra036460.1-P	Field mustard	cytosol	55.87	31.99
Zm00001d034927_P001	Maize	cytosol	55.75	31.79
CDY31978	Canola	cytosol	56.1	31.08
HORVU5Hr1G125430.15	Barley	cytosol	53.29	30.84
TraesCS4A01G313500.1	Wheat	cytosol	53.52	30.67
TraesCS5B01G566200.1	Wheat	cytosol	53.52	30.67
TraesCS5D01G558600.1	Wheat	cytosol	53.29	30.51
CDY05734	Canola	cytosol	56.1	30.29
PGSC0003DMT400053991	Potato	cytosol	54.34	30.28
CDY65572	Canola	plastid	66.43	29.77
CDY35211	Canola	plastid	66.31	29.64
GSMUA_Achr1P03340_001	Banana	cytosol	62.91	28.85
PGSC0003DMT400079921	Potato	cytosol	50.7	27.5
Os03t0860700-00	Rice	cytosol, plasma membrane	26.64	25.53
PGSC0003DMT400049643	Potato	cytosol	11.85	17.06
PGSC0003DMT400064422	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:3.30.70.3240	MapMan:35.1	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787	InterPro:IPR000048
InterPro:IPR001609	InterPro:IPR002710	InterPro:IQ_motif_EF-hand-BS	UniProt:M1B6E0	InterPro:MyosinXI_CBD	InterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	EnsemblPlantsGene:PGSC0003DMG400014709	PGSC:PGSC0003DMG400014709
EnsemblPlants:PGSC0003DMT400038143	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256
SMART:SM00015	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI000294D50F	SEG:seg	:

Description

Myosin XI-2 [Source:PGSC_GENE;Acc:PGSC0003DMG400014709]

Coordinates

chr6:+:1945555..1957734

Molecular Weight (calculated)

97410.5 Da

IEP (calculated)

9.497

GRAVY (calculated)

-0.454

Length

852 amino acids

Sequence
(BLAST)

001: MEAIRISCAG YPTRKPFYEF LDRFGILSPE VLDGSTDEVT ACTRLLEKVG LQGYQIGKTK VFLRAGQMAE LDSRRTEVLG RSASIIQRKV RSHMARRNFT
101: LLRQLARRIQ SMCRGELARR VYESLRREAA CLKIQTDMRM HLARKGYKEL CSAAISIQTG MRGMAARNEV RFRRQTKAAI IIQSHSRAFL ARLKYKKLKK
201: AAITTQCAWR ARVARGELRK LKMAARETGA LQAAKNKLEK QVEELTWRLQ LEKRMRADME EAKTQENAKL QSALQEVQLQ FKETQEMFVK ERETTKRAAE
301: EVPIMQEVPV VDHEMMNKLS VENEKLKSLV SSLEQKIDET EKKYEETSKL SEERLRQVLD AESIIVQLKT TMQRFQERNF DLESENQILQ QSLLAPAKQV
401: SDHSPSLSSK VQIEENGYHL KEETRTNDPP GSTPAKKVET PNSKSRKPPI DRQREDIGAL IDCVMKDVGF SQSKPVAAFT IYKCLLHWKS FEAEKTSVFD
501: RLVQMIGSAI ENQDSDDHMA YWLSNTSTLL LLIQKSLKPD SAVGATPTRK PQPATSLFGR MTLGFRSSSS DINLAGVVHQ VQAKYPALLF KQQLTAYVEK
601: MYGIIRDNLK KELGSLLSLC IQAPRTSKGS VLKSGRSFGK DYSINHWRGI IECLDSLLCT LKENFMPPIL VQKIFSQAFS YMNVQLFNSF LLRRECCTFS
701: NAEYVKSGLA ELELWCSQAK EEYAGSSWDE LRHIRQVVGF LVIHQKYRIS YDDITNDLCP VLSVQQLYRV CTLYWDDKYN TRSVSPDVIS NMRVLMTEDS
801: NDAKSNSFLL DDNPSIPFSI EEVSNSLQVK DFADVKPATK LLENPAFQFL HE

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.