Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G137900.1 | |
| TraesCS4B01G148100.1 | |
| TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G04600.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G183200.1 | Wheat | cytosol | 99.01 | 99.01 |
| TraesCS1D01G174000.2 | Wheat | cytosol | 97.62 | 97.68 |
| HORVU1Hr1G044020.1 | Barley | cytosol | 97.28 | 97.35 |
| KXG34975 | Sorghum | cytosol | 84.5 | 88.49 |
| Zm00001d019495_P001 | Maize | cytosol | 87.81 | 88.05 |
| TraesCS4A01G313500.1 | Wheat | cytosol | 73.84 | 74.98 |
| TraesCS6A01G390800.2 | Wheat | cytosol | 67.81 | 67.81 |
| Solyc09g064200.2.1 | Tomato | plastid | 67.42 | 67.24 |
| PGSC0003DMT400056647 | Potato | cytosol | 67.28 | 67.11 |
| VIT_07s0005g04790.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 67.02 | 66.67 |
| Solyc06g008090.2.1 | Tomato | cytosol | 65.5 | 66.64 |
| KRH32270 | Soybean | cytosol | 66.69 | 66.51 |
| KRH19659 | Soybean | cytosol | 66.82 | 66.43 |
| VIT_05s0051g00050.t01 | Wine grape | cytosol | 64.9 | 65.86 |
| VIT_00s0268g00030.t01 | Wine grape | cytosol | 19.4 | 65.84 |
| KRH67505 | Soybean | cytosol | 65.89 | 65.81 |
| KRG95788 | Soybean | cytosol | 66.09 | 65.79 |
| Bra011053.1-P | Field mustard | cytosol | 64.57 | 64.74 |
| CDY32922 | Canola | cytosol | 63.97 | 64.1 |
| AT1G04160.1 | Thale cress | cytosol | 63.51 | 63.93 |
| Bra032526.1-P | Field mustard | cytosol | 63.31 | 63.56 |
| CDY64313 | Canola | cytosol | 63.97 | 63.51 |
| CDX94736 | Canola | cytosol | 64.24 | 63.48 |
| Bra027512.1-P | Field mustard | cytosol | 51.66 | 63.41 |
| AT4G28710.1 | Thale cress | cytosol | 63.51 | 63.26 |
| CDY32531 | Canola | endoplasmic reticulum | 63.24 | 63.2 |
| CDY10075 | Canola | endoplasmic reticulum | 63.31 | 63.1 |
| CDY22325 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 64.04 | 62.79 |
| AT5G43900.3 | Thale cress | cytosol | 64.17 | 61.92 |
| Bra036688.1-P | Field mustard | cytosol | 58.15 | 60.76 |
| CDY03315 | Canola | cytosol | 58.28 | 59.82 |
| CDY39766 | Canola | cytosol | 58.21 | 59.8 |
| AT2G20290.1 | Thale cress | endoplasmic reticulum | 58.74 | 59.41 |
| PGSC0003DMT400038143 | Potato | cytosol | 33.44 | 59.27 |
| TraesCS3A01G209500.1 | Wheat | cytosol | 59.14 | 58.6 |
| Bra036460.1-P | Field mustard | cytosol | 57.55 | 58.4 |
| Bra033704.1-P | Field mustard | cytosol, plastid | 64.11 | 58.38 |
| KRG89126 | Soybean | cytosol | 60.6 | 57.87 |
| Solyc09g091080.2.1 | Tomato | cytosol | 61.79 | 57.38 |
| CDY31978 | Canola | cytosol | 57.48 | 56.44 |
| CDY05734 | Canola | cytosol | 57.81 | 55.32 |
| VIT_16s0115g00220.t01 | Wine grape | cytosol | 9.74 | 55.06 |
| KRH40872 | Soybean | cytosol | 60.2 | 54.46 |
| TraesCS5A01G386500.1 | Wheat | cytosol | 55.89 | 54.24 |
| GSMUA_Achr1P03340_001 | Banana | cytosol | 65.63 | 53.34 |
| AT1G04600.1 | Thale cress | cytosol | 59.6 | 52.02 |
| CDY65572 | Canola | plastid | 64.5 | 51.24 |
| CDY35211 | Canola | plastid | 64.57 | 51.15 |
| VIT_04s0079g00370.t01 | Wine grape | cytosol | 13.91 | 51.09 |
| TraesCS6A01G336500.1 | Wheat | cytosol | 50.6 | 51.04 |
| CDY15512 | Canola | cytosol | 59.14 | 50.88 |
| CDX86626 | Canola | cytosol | 58.61 | 50.63 |
| CDX79520 | Canola | endoplasmic reticulum | 50.66 | 50.6 |
| Bra030576.1-P | Field mustard | cytosol | 56.42 | 50.38 |
| CDX84695 | Canola | cytosol | 57.62 | 50.17 |
| AT2G33240.1 | Thale cress | cytosol | 58.74 | 50.11 |
| CDY19473 | Canola | cytosol | 57.95 | 49.97 |
| CDY17154 | Canola | cytosol | 57.95 | 47.87 |
| TraesCS1A01G358500.1 | Wheat | cytosol | 50.26 | 36.44 |
| TraesCS3A01G248800.7 | Wheat | cytosol | 53.38 | 33.71 |
| TraesCS3A01G058100.1 | Wheat | cytosol | 16.69 | 31.82 |
| TraesCS1A01G162800.1 | Wheat | mitochondrion | 25.17 | 31.72 |
| TraesCS2A01G204700.1 | Wheat | cytosol, plastid | 24.7 | 29.53 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016787 | InterPro:IPR000048 |
| InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS | InterPro:Kinesin_motor_dom_sf |
| InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N | InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase | PFAM:PF00063 |
| PFAM:PF00612 | PFAM:PF01843 | PFAM:PF02736 | PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 |
| PFscan:PS51456 | PFscan:PS51844 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF515 | SMART:SM00015 | SMART:SM00242 |
| SMART:SM01132 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1A01G166900 | EnsemblPlants:TraesCS1A01G166900.2 | TIGR:cd01384 | TIGR:cd15475 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:299624841..299657412
Molecular Weight (calculated)
172170.0 Da
IEP (calculated)
7.314
GRAVY (calculated)
-0.400
Length
1510 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASMGRFTVG SQVWVEDADV AWIDGLVEEV HGDELIINCT SGKKVTANVS SVYPKDVEVK RCGVEDMTRL AYLHEPGVLR NLKSRYGMNE IYTYTGNILI
0101: AVNPFQRLPH LYNDHMMEMY KGAEFGELSP HPFAMADRAY RLMMNYGTSQ AILVSGESGA GKTESTKMLM QYLAFMGGKV ESDGRSVQQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE LQFDQNGKIS GAAIRTYLLE RSRVCQISDP ERNYHCFYML CAAPPEDRER YKLGDASLFH YLNQSNCIKL DGMDDSSEYI
0301: ATRRAMDIVG ISSDEQDAIF RVVAAILHLG NVEFSEGSEA DSSVPKDDKS QFHLRTAAEL FMCDEKSLEE SLCKRVMVTR GESIVRNLDS RAAALSRDAL
0401: ARMVYSRLFD WLVNKINTTI GQDPTSKLLI GVLDIYGFES FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEID WSYIQFVDNQ EILDLIEKKP
0501: GGIIALLDET CMLRNSNHET FAEKLYQKFK DNPHFSRPKF SRSDFTIHHY AGNVTYQTDL FLDKNIDYAV NEHQDLLHAS TSPFVSSLFP PSEESTKSNK
0601: STKFTSIGSS FKQQLQGLLE TLSSTEPHYM RCIKPNNVLK PAIFENSNVL QQLRCGGVLE AIRISCLGYP TRRTFEEFVD RFSVLRPEVL GLCYDEVTAT
0701: NMVLEKVNLT GYQIGKTKVF LRAGQMAELD ARRTEVLSYS ASKIQRKVRS FLARRNFIQL RMSSVQLQAM CRGQIARHYY EDLRRKAASL KIQTYYRMHF
0801: ARKNYKALYS ASTTIQSGLR GMAARNEFHF RQQTKAAVII QSCCRSDLAS SRYMGLKKAA ITTQCAWRGR VARRELRKLK MAAKESGALQ AAKNKLEKQV
0901: EELTWRLQLE KRMRTDMEEA KTQENKKLQQ QLQELQFQSK ETKDILRREQ ENTKTALEKA ALVPEIQIDT THVDKLTAEN ENLKTLVISL ETKIEETEQK
1001: FEEMKKGREE LLKIATDAES KINELTNTML SFQEKLTNME AENQLLRQQA LLHSRLKTIS ENTSPKSNST NGSPHYEEQM TPHGTPRAPK DYGNFAHPRA
1101: SFSERQHDTV DALINCVTEN IGFSEGKPVA AITIYKCLVH WKIFETEKTS VFDRLIQIFG SAMQNHDSNE DLAYWLSNSS TLLIILQKSL KAVGSTGTTP
1201: HKRPQNQSSF LGRMVFRSSN ITVDMDLVRQ IEAKYPAFLF KQQLAAFVEG LYGMIRDNVK KELSALLLHA IQVPRIIKAS MVRGRSFGSS SLRGRSFSNQ
1301: GSYWLAIVDN LNELLNILRE NCVPAIFIRK IFTQIFSFIN AQLFNSLLVR HECCSFSNGE YVKQGLAQLE VWCGEVKPEY AGSALHELRH IRQAVGFLVI
1401: FKKFRISYDE IVNDLCPVLS VQQLYKICTQ YWDDKYNTES VSEEVLDEMR TLMTEESGHN ASEGAFLLDD EISMPISLEE IADSMDVKEF QNVAPPSELV
1501: AMSAFQFLKS
0101: AVNPFQRLPH LYNDHMMEMY KGAEFGELSP HPFAMADRAY RLMMNYGTSQ AILVSGESGA GKTESTKMLM QYLAFMGGKV ESDGRSVQQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE LQFDQNGKIS GAAIRTYLLE RSRVCQISDP ERNYHCFYML CAAPPEDRER YKLGDASLFH YLNQSNCIKL DGMDDSSEYI
0301: ATRRAMDIVG ISSDEQDAIF RVVAAILHLG NVEFSEGSEA DSSVPKDDKS QFHLRTAAEL FMCDEKSLEE SLCKRVMVTR GESIVRNLDS RAAALSRDAL
0401: ARMVYSRLFD WLVNKINTTI GQDPTSKLLI GVLDIYGFES FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEID WSYIQFVDNQ EILDLIEKKP
0501: GGIIALLDET CMLRNSNHET FAEKLYQKFK DNPHFSRPKF SRSDFTIHHY AGNVTYQTDL FLDKNIDYAV NEHQDLLHAS TSPFVSSLFP PSEESTKSNK
0601: STKFTSIGSS FKQQLQGLLE TLSSTEPHYM RCIKPNNVLK PAIFENSNVL QQLRCGGVLE AIRISCLGYP TRRTFEEFVD RFSVLRPEVL GLCYDEVTAT
0701: NMVLEKVNLT GYQIGKTKVF LRAGQMAELD ARRTEVLSYS ASKIQRKVRS FLARRNFIQL RMSSVQLQAM CRGQIARHYY EDLRRKAASL KIQTYYRMHF
0801: ARKNYKALYS ASTTIQSGLR GMAARNEFHF RQQTKAAVII QSCCRSDLAS SRYMGLKKAA ITTQCAWRGR VARRELRKLK MAAKESGALQ AAKNKLEKQV
0901: EELTWRLQLE KRMRTDMEEA KTQENKKLQQ QLQELQFQSK ETKDILRREQ ENTKTALEKA ALVPEIQIDT THVDKLTAEN ENLKTLVISL ETKIEETEQK
1001: FEEMKKGREE LLKIATDAES KINELTNTML SFQEKLTNME AENQLLRQQA LLHSRLKTIS ENTSPKSNST NGSPHYEEQM TPHGTPRAPK DYGNFAHPRA
1101: SFSERQHDTV DALINCVTEN IGFSEGKPVA AITIYKCLVH WKIFETEKTS VFDRLIQIFG SAMQNHDSNE DLAYWLSNSS TLLIILQKSL KAVGSTGTTP
1201: HKRPQNQSSF LGRMVFRSSN ITVDMDLVRQ IEAKYPAFLF KQQLAAFVEG LYGMIRDNVK KELSALLLHA IQVPRIIKAS MVRGRSFGSS SLRGRSFSNQ
1301: GSYWLAIVDN LNELLNILRE NCVPAIFIRK IFTQIFSFIN AQLFNSLLVR HECCSFSNGE YVKQGLAQLE VWCGEVKPEY AGSALHELRH IRQAVGFLVI
1401: FKKFRISYDE IVNDLCPVLS VQQLYKICTQ YWDDKYNTES VSEEVLDEMR TLMTEESGHN ASEGAFLLDD EISMPISLEE IADSMDVKEF QNVAPPSELV
1501: AMSAFQFLKS
0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
Arabidopsis Description
XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.