Factsheet for AT2G20290.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036688.1-P	Field mustard	cytosol	80.31	82.98
CDY39766	Canola	cytosol	81.31	82.58
CDY03315	Canola	cytosol	81.31	82.53
Bra036460.1-P	Field mustard	cytosol	80.64	80.91
CDY31978	Canola	cytosol	81.45	79.06
CDY05734	Canola	cytosol	81.04	76.68
AT4G28710.1	Thale cress	cytosol	70.46	69.39
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.99	67.85
KRH67505	Soybean	cytosol	68.05	67.2
PGSC0003DMT400056647	Potato	cytosol	68.12	67.17
KRG95788	Soybean	cytosol	68.18	67.11
Solyc09g064200.2.1	Tomato	plastid	67.92	66.97
Solyc06g008090.2.1	Tomato	cytosol	66.31	66.71
KRH32270	Soybean	cytosol	67.65	66.71
KRH19659	Soybean	cytosol	67.65	66.49
AT1G04160.1	Thale cress	cytosol	65.71	65.4
Os03t0860700-00	Rice	cytosol, plasma membrane	38.85	65.24
OQU85951	Sorghum	cytosol	65.3	64.1
AT5G43900.3	Thale cress	cytosol	67.18	64.09
TraesCS6A01G390800.2	Wheat	cytosol	64.3	63.58
TraesCS6B01G431400.1	Wheat	cytosol	64.3	63.58
TraesCS6D01G377100.1	Wheat	cytosol	64.3	63.58
HORVU6Hr1G091010.24	Barley	cytosol	64.03	63.27
Zm00001d018481_P033	Maize	cytosol	64.7	63.18
Os02t0816900-01	Rice	cytosol, plasma membrane	53.25	62.65
GSMUA_AchrUn_...	Banana	cytosol	63.43	61.49
Zm00001d034927_P001	Maize	cytosol	60.42	60.37
KXG34975	Sorghum	cytosol	58.14	60.19
EER90459	Sorghum	cytosol	59.68	60.04
Zm00001d019495_P001	Maize	cytosol	59.88	59.36
TraesCS1D01G174000.2	Wheat	cytosol	59.75	59.11
GSMUA_Achr3P27420_001	Banana	cytosol	65.91	58.96
HORVU1Hr1G044020.1	Barley	cytosol	59.48	58.85
TraesCS1A01G166900.2	Wheat	cytosol	59.41	58.74
TraesCS1B01G183200.1	Wheat	cytosol	59.34	58.68
HORVU5Hr1G125430.15	Barley	cytosol	57.6	58.42
TraesCS5D01G558600.1	Wheat	cytosol	57.94	58.13
TraesCS4A01G313500.1	Wheat	cytosol	57.74	57.97
TraesCS5B01G566200.1	Wheat	cytosol	57.74	57.97
PGSC0003DMT400038143	Potato	cytosol	32.89	57.63
AT1G54560.1	Thale cress	cytosol	58.41	57.03
AT1G08730.1	Thale cress	endoplasmic reticulum	58.74	57.02
AT5G20490.2	Thale cress	cytosol	57.87	56.43
AT1G17580.1	Thale cress	cytosol	56.93	55.92
AT2G31900.2	Thale cress	cytosol	55.06	52.79
AT1G04600.1	Thale cress	cytosol	60.01	51.79
AT2G33240.1	Thale cress	cytosol	58.61	49.44
AT3G58160.1	Thale cress	cytosol	40.99	49.28
GSMUA_Achr1P03340_001	Banana	cytosol	60.75	48.82
AT4G33200.4	Thale cress	cytosol	47.62	46.68
AT1G50360.1	Thale cress	cytosol	25.39	32.87
AT3G19960.2	Thale cress	cytosol, plastid	25.32	32.14
AT4G27370.2	Thale cress	cytosol	24.11	31.69
AT5G54280.2	Thale cress	cytosol	24.92	30.49
AT5G20470.1	Thale cress	endoplasmic reticulum	11.25	30.22

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:816548	ProteinID:AAD21759.1	ProteinID:AEC06990.1	ArrayExpress:AT2G20290	EnsemblPlantsGene:AT2G20290
RefSeq:AT2G20290	TAIR:AT2G20290	RefSeq:AT2G20290-TAIR-G	EnsemblPlants:AT2G20290.1	TAIR:AT2G20290.1	Unigene:At.52842
ncoils:Coil	InterPro:Dilute_dom	UniProt:F4IUG9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459
GO:GO:0016787	GO:GO:0030048	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11
InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_179619.2	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256
SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI000034ED44
Symbol:XIG	SEG:seg	:	:	:	:

Description

XI-GMyosin-13 [Source:UniProtKB/Swiss-Prot;Acc:F4IUG9]

Coordinates

chr2:-:8743015..8751878

Molecular Weight (calculated)

169082.0 Da

IEP (calculated)

7.458

GRAVY (calculated)

-0.342

Length

1493 amino acids

Sequence
(BLAST)

0001: MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE
0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ
0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL
0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN
0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY
0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP
0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS
0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ
0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA
0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE
1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES
1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS
1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL
1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI
1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.