Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027968.1-P | Field mustard | cytosol | 92.74 | 93.35 |
| CDX95235 | Canola | cytosol | 92.87 | 92.45 |
| CDY42350 | Canola | cytosol | 90.84 | 92.42 |
| AT1G08730.1 | Thale cress | endoplasmic reticulum | 90.45 | 89.92 |
| VIT_14s0081g00160.t01 | Wine grape | cytosol | 83.26 | 83.58 |
| KRG92711 | Soybean | cytosol | 83.32 | 83.11 |
| KRH34117 | Soybean | cytosol | 82.86 | 82.7 |
| Solyc11g006220.1.1 | Tomato | cytosol, extracellular | 80.71 | 80.86 |
| GSMUA_Achr7P26040_001 | Banana | cytosol | 28.12 | 80.83 |
| Os06t0488200-01 | Rice | cytosol, plasma membrane | 80.77 | 80.77 |
| KRH68770 | Soybean | cytosol | 79.53 | 80.26 |
| Zm00001d044819_P002 | Maize | cytosol | 79.79 | 79.79 |
| OQU76115 | Sorghum | cytosol | 77.11 | 79.61 |
| TraesCS7D01G190300.1 | Wheat | cytosol | 79.46 | 79.41 |
| TraesCS7B01G094100.1 | Wheat | cytosol | 78.22 | 78.07 |
| HORVU7Hr1G038500.56 | Barley | cytosol | 79.59 | 77.91 |
| GSMUA_Achr4P14090_001 | Banana | cytosol | 78.22 | 76.96 |
| AT5G20490.2 | Thale cress | cytosol | 72.79 | 72.7 |
| AT1G17580.1 | Thale cress | cytosol | 66.06 | 66.45 |
| GSMUA_Achr7P26030_001 | Banana | cytosol | 49.57 | 63.48 |
| AT1G04160.1 | Thale cress | cytosol | 60.95 | 62.13 |
| GSMUA_Achr4P07150_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 81.03 | 61.8 |
| AT4G28710.1 | Thale cress | cytosol | 60.63 | 61.15 |
| AT5G43900.3 | Thale cress | cytosol | 61.48 | 60.06 |
| AT2G31900.2 | Thale cress | cytosol | 60.95 | 59.86 |
| AT2G20290.1 | Thale cress | endoplasmic reticulum | 57.03 | 58.41 |
| AT3G58160.1 | Thale cress | cytosol | 45.52 | 56.04 |
| AT4G33200.4 | Thale cress | cytosol | 53.96 | 54.17 |
| AT1G04600.1 | Thale cress | cytosol | 57.03 | 50.4 |
| AT2G33240.1 | Thale cress | cytosol | 55.98 | 48.36 |
| AT5G20470.1 | Thale cress | endoplasmic reticulum | 14.26 | 39.21 |
| AT1G50360.1 | Thale cress | cytosol | 25.7 | 34.09 |
| AT3G19960.2 | Thale cress | cytosol, plastid | 25.31 | 32.91 |
| AT4G27370.2 | Thale cress | cytosol | 24.26 | 32.66 |
| AT5G54280.2 | Thale cress | cytosol | 25.44 | 31.89 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | EntrezGene:841898 | ProteinID:AAC64896.1 | ProteinID:AEE33118.1 | ArrayExpress:AT1G54560 | EnsemblPlantsGene:AT1G54560 |
| RefSeq:AT1G54560 | TAIR:AT1G54560 | RefSeq:AT1G54560-TAIR-G | EnsemblPlants:AT1G54560.1 | TAIR:AT1G54560.1 | Unigene:At.52200 |
| ncoils:Coil | InterPro:Dilute_dom | UniProt:F4HWY6 | GO:GO:0000003 | GO:GO:0000146 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003779 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009653 | GO:GO:0009856 | GO:GO:0009860 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0016459 | GO:GO:0016787 | GO:GO:0030048 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0051640 |
| InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N | InterPro:Myosin_head_motor_dom | RefSeq:NP_175858.1 |
| InterPro:P-loop_NTPase | PFAM:PF00063 | PFAM:PF00612 | PFAM:PF01843 | PFAM:PF02736 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 | PFscan:PS51456 | PFscan:PS51844 |
| PANTHER:PTHR13140 | PANTHER:PTHR13140:SF510 | SMART:SM00015 | SMART:SM00242 | SMART:SM01132 | SUPFAM:SSF52540 |
| UniParc:UPI000016314A | Symbol:XIE | SEG:seg | : | : | : |
Description
XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
Coordinates
chr1:-:20371520..20379745
Molecular Weight (calculated)
173620.0 Da
IEP (calculated)
9.367
GRAVY (calculated)
-0.418
Length
1529 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRNSGTPVNI IVGSHVWIED SDVAWIDGLV EKINGQDVEV QATNGKKITA KLSKIYPKDM EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE LNEIYTYTGN
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.