Factsheet for AT3G19960.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24591	Canola	cytosol, plastid	90.14	91.46
Bra035834.1-P	Field mustard	cytosol	89.29	91.15
CDY36068	Canola	cytosol, mitochondrion	87.5	90.82
Bra001768.1-P	Field mustard	cytosol	87.24	90.32
CDX82270	Canola	cytosol	87.07	85.62
AT1G50360.1	Thale cress	cytosol	81.04	82.65
VIT_10s0071g00210.t01	Wine grape	plastid	75.51	75.25
KRG90612	Soybean	cytosol	74.83	75.21
KRH36145	Soybean	cytosol	75.08	75.08
Solyc02g020910.2.1	Tomato	nucleus	73.13	74.33
KRG89103	Soybean	cytosol	73.72	73.72
KRH40907	Soybean	cytosol	72.62	72.99
Os10t0488800-01	Rice	cytosol	56.55	70.0
CDY25361	Canola	cytosol	88.95	67.53
HORVU1Hr1G043440.4	Barley	cytosol	62.84	65.46
Zm00001d013967_P004	Maize	mitochondrion	65.99	64.99
EER94044	Sorghum	mitochondrion	65.65	64.55
Zm00001d032637_P004	Maize	mitochondrion	65.22	64.4
GSMUA_Achr1P01870_001	Banana	cytosol	68.88	63.88
TraesCS1B01G179500.2	Wheat	mitochondrion	63.86	62.9
TraesCS1D01G159600.1	Wheat	mitochondrion	63.61	62.8
TraesCS1A01G162800.1	Wheat	mitochondrion	63.86	62.69
GSMUA_Achr2P10680_001	Banana	cytosol	63.44	59.11
AT5G54280.2	Thale cress	cytosol	52.55	50.66
AT4G27370.2	Thale cress	cytosol	48.81	50.53
AT3G58160.1	Thale cress	cytosol	29.51	27.94
AT1G04160.1	Thale cress	cytosol	32.4	25.4
AT5G20490.2	Thale cress	cytosol	32.99	25.34
AT4G28710.1	Thale cress	cytosol	32.65	25.33
AT2G20290.1	Thale cress	endoplasmic reticulum	32.14	25.32
AT1G54560.1	Thale cress	cytosol	32.91	25.31
AT1G08730.1	Thale cress	endoplasmic reticulum	32.82	25.1
AT1G17580.1	Thale cress	cytosol	32.31	25.0
AT5G43900.3	Thale cress	cytosol	33.25	24.98
AT4G33200.4	Thale cress	cytosol	32.14	24.82
AT2G31900.2	Thale cress	cytosol	31.46	23.76
AT1G04600.1	Thale cress	cytosol	32.06	21.79
AT2G33240.1	Thale cress	cytosol	32.06	21.3
AT5G20470.1	Thale cress	endoplasmic reticulum	3.66	7.73

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.1590
Gene3D:3.40.850.10	EntrezGene:821534	ProteinID:AEE76313.1	ArrayExpress:AT3G19960	EnsemblPlantsGene:AT3G19960	RefSeq:AT3G19960
TAIR:AT3G19960	RefSeq:AT3G19960-TAIR-G	EnsemblPlants:AT3G19960.2	TAIR:AT3G19960.2	Symbol:ATM1	Unigene:At.515
ncoils:Coil	UniProt:F4JCF9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005783	GO:GO:0005856
GO:GO:0005886	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009504	GO:GO:0009524
GO:GO:0009987	GO:GO:0016020	GO:GO:0016459	GO:GO:0016787	GO:GO:0030048	GO:GO:0051015
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_001154628.2
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015
SMART:SM00242	SUPFAM:SSF52540	SUPFAM:SSF57997	UniParc:UPI0001E92EB8	SEG:seg	:

Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]

Coordinates

chr3:+:6948774..6956966

Molecular Weight (calculated)

132462.0 Da

IEP (calculated)

8.233

GRAVY (calculated)

-0.397

Length

1176 amino acids

Sequence
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIIRCICIH ESMTYSISSS SGESGAGKTE TAKIAMQYLA ALGGGSGIEY
0301: EILKTNPILE AFGNAKTLRN DNSSRFGKLI EIHFSESGKI SGAQIQTFLL EKSRVVQCAE GERSYHIFYQ LCAGASPALR EKLNLTSAHE YKYLGQSNCY
0401: SINGVDDAER FHTVKEALDI VHVSKEDQES VFAMLAAVLW LGNVSFTVID NENHVEPVAD ESFLFHSLGS WCWKQECLLH NMCLSTVAKL IGCNINELTL
0501: TLSKRNMRVR NDTIVQKLTL PQAIDARDAL AKSIYSCLFD WLVEQINKSL AVGKRRTGRS ISILDIYGFE SFDKNSFEQF CINYANERLQ QHFNRHLFKL
0601: EQEEYIQDGI DWTRVDFEDN QNCLSLFEKK PLGLLSLLDE ESTFPNGTDL TLANKLKQHL QSNSCFRGDK GKLFTVVHYA GEVTYETTGF LEKNRDLLHS
0701: DSIQLLSSCS CLLPQAFASS MLIQSEKPVV GPLYKAGGAD SQRLSVATKF KSQLFQLMQR LGNTTPHFIR CIKPNNIQSP GVYEQGLVLQ QLRCCGVLEV
0801: LCKGPYKRFF IIAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK
0901: AAATIQSQVK SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN
1001: RWSEYETKMK SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD
1101: DAKFLVEVKS GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.