CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40907	Soybean	cytosol	95.58	96.07
KRG90612	Soybean	cytosol	86.56	87.01
KRH36145	Soybean	cytosol	86.73	86.73
VIT_10s0071g00210.t01	Wine grape	plastid	80.87	80.59
Bra001768.1-P	Field mustard	cytosol	75.43	78.08
Solyc02g020910.2.1	Tomato	nucleus	76.62	77.87
Bra035834.1-P	Field mustard	cytosol	75.77	77.34
CDY24591	Canola	cytosol, plastid	75.77	76.88
AT1G50360.1	Thale cress	cytosol	74.32	75.8
CDY36068	Canola	cytosol, mitochondrion	72.7	75.46
Bra018844.1-P	Field mustard	cytosol	73.38	74.91
CDY42506	Canola	cytosol, plastid	73.13	74.85
CDY22791	Canola	cytosol, plastid	73.47	74.68
Os10t0488800-01	Rice	cytosol	60.12	74.42
CDX82270	Canola	cytosol	75.26	74.0
AT3G19960.2	Thale cress	cytosol, plastid	73.72	73.72
CDY29324	Canola	cytosol	71.6	73.34
Bra039641.1-P	Field mustard	cytosol	71.6	73.34
KRH13051	Soybean	cytosol	16.33	71.64
CDY53932	Canola	cytosol, plastid	71.43	71.13
HORVU1Hr1G043440.4	Barley	cytosol	66.41	69.18
GSMUA_Achr1P01870_001	Banana	cytosol	72.87	67.59
Zm00001d032637_P004	Maize	mitochondrion	67.69	66.83
EER94044	Sorghum	mitochondrion	67.94	66.81
Zm00001d013967_P004	Maize	mitochondrion	67.69	66.67
TraesCS1D01G159600.1	Wheat	mitochondrion	67.18	66.33
TraesCS1B01G179500.2	Wheat	mitochondrion	67.26	66.25
TraesCS1A01G162800.1	Wheat	mitochondrion	67.26	66.03
GSMUA_Achr2P10680_001	Banana	cytosol	67.6	63.0
CDY25361	Canola	cytosol	75.77	57.52
KRH22163	Soybean	cytosol	56.12	55.18
KRH27175	Soybean	cytosol	55.61	54.64
KRH55425	Soybean	cytosol	51.87	51.96
KRH26031	Soybean	cytosol	51.62	51.44
KRH32145	Soybean	cytosol	30.53	35.37
KRH19523	Soybean	cytosol	31.55	34.45
KRH15597	Soybean	cytosol	34.86	26.94
KRH19248	Soybean	cytosol	34.86	26.8
KRH02661	Soybean	cytosol	34.78	26.73
KRH32270	Soybean	cytosol	34.18	26.55
KRH19659	Soybean	cytosol	34.27	26.53
KRG92711	Soybean	cytosol	34.27	26.29
KRH61584	Soybean	cytosol	33.93	26.18
KRH34117	Soybean	cytosol	34.1	26.17
KRG95788	Soybean	cytosol	33.76	26.17
KRH52257	Soybean	cytosol	33.84	26.17
KRH67505	Soybean	cytosol	33.5	26.06
KRH68770	Soybean	cytosol	32.74	25.41
KRH13822	Soybean	cytosol	33.25	24.68
KRG89126	Soybean	cytosol	33.08	24.6
KRH43634	Soybean	cytosol	33.25	23.61
KRH40872	Soybean	cytosol	32.57	22.95

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100781736	Gene3D:2.30.30.360	MapMan:20.2.4.2
Gene3D:3.30.70.3240	Gene3D:3.40.850.10	EMBL:ACUP02012185	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G001300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	UniProt:I1NCW2	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KRG89103	ProteinID:KRG89103	ProteinID:KRG89103.1	ProteinID:KRG89104.1
InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844
PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000233D904
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:124660..142033

Molecular Weight (calculated)

132794.0 Da

IEP (calculated)

8.103

GRAVY (calculated)

-0.423

Length

1176 amino acids

Sequence
(BLAST)

0001: MSATSKVLPA LHPIKSLPPK FKITSGNPTA GLMENHGDAK FRSNDVIRSG SPENDALIGE VAEEAQNCAG DMGVYGEDLA YSRKGVSLED RPSIADEDLE
0101: SVPLPFPSIS MSSRERRWSD TTPYASKKKL QSWFQLPNGN WELGKIITTS GNESIISLFD GKVLKVKEES LVPANPDILD GVDDLMQLSY LNEPSVLFNL
0201: QYRYNQNMIY TKAGPVLVAI NPFKKVPLYG NDYIEAYKRK AIESPHVYAI TDTAIREMIR DEVNQSIIIS GESGAGKTET AKIAMQYLAA LGGGSGIEYE
0301: ILKTNPILEA FGNAKTLRND NSSRFGKLIE IHFSETGKIS GANIQTFLLE KSRVVQCNEG ERSYHIFYQL CAGAPPSLRG KLNLQNAEDY NYLRQSNCYS
0401: ITGVNDAEEF RTVMEALDVV HISKEDQENV FAMLAAVLWL GNISFTVIDN ENHVQAVEDE GLFHVAKLIG CSIEDLKLTL STRKMKVGND NIVQKLTLSQ
0501: AIDARDALAK SIYACLFDWL VEQINKSLAV GKRRTGRSIS ILDIYGFESF NRNSFEQFCI NYANERLQQH FNRHLFKLEQ EEYIQDGIDW AKVEFEDNQD
0601: CLNLFEKRPL GLLSLLDEES TFPNGTDLTL ANKLKQHLNS NSCFKGERDQ AFTVHHYAGQ VTYDTTGFLE KNRDLLHVDS IQLLSSCTCP LPQIFASHML
0701: TQSDKPVVGP LHKSGGADSQ KLSVATKFKG QLFQLMQRLE STTPHFIRCI KPNNLQSPES YEQGLVLQQL RCCGVLEVVR ISRSGFPTRM SHQKFARRYG
0801: FLLDNVASQD PLSVSVAILH QFNILSEMYQ VGYTKLFFRT GQIGVLEDTR NRTLHGILRV QSCFRGFQAR RSLKDLRGGI TTLQSFIRGD KTRKAYSALL
0901: KRHRAAVIIQ KQIKAVFARN RMRTISDAAI VIQAVIRGWL VRRCSGNIGF LKSGDMKMKE SDEVLVKSSF LAELQCRVLK AEAALREKEE ENDILHQRLQ
1001: QYESRWSEYE LKMKSMEEVW QKQMRSLQSS LSIAKKSLAI DDSERNSDTS VNASDERDYS WDVGGNHRRQ ESNGARSTSA GLSVISRLAE EFEHRSQVFG
1101: DDAKFLVEVK SGQVEASLNP DQELRRLKQM FEAWKKDYGA RLRETKVIIN KLGSEDGALE KMKKKWWGRR NSTRIN

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.