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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • peroxisome 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82270 Canola cytosol 94.97 89.97
CDY24591 Canola cytosol, plastid 91.7 89.65
AT3G19960.2 Thale cress cytosol, plastid 90.82 87.5
CDY22791 Canola cytosol, plastid 81.82 80.12
CDY42506 Canola cytosol, plastid 81.2 80.07
CDY29324 Canola cytosol 79.26 78.22
CDY53932 Canola cytosol, plastid 78.82 75.61
VIT_10s0071g00210.t01 Wine grape plastid 77.49 74.41
KRG90612 Soybean cytosol 76.61 74.19
KRH36145 Soybean cytosol 76.79 73.98
Solyc02g020910.2.1 Tomato nucleus 74.49 72.95
KRG89103 Soybean cytosol 75.46 72.7
KRH40907 Soybean cytosol 74.76 72.39
Os10t0488800-01 Rice cytosol 58.43 69.68
CDY25361 Canola cytosol 90.64 66.3
HORVU1Hr1G043440.4 Barley cytosol 65.14 65.37
Zm00001d013967_P004 Maize mitochondrion 68.05 64.57
EER94044 Sorghum mitochondrion 67.61 64.05
Zm00001d032637_P004 Maize mitochondrion 67.17 63.9
GSMUA_Achr1P01870_001 Banana cytosol 70.87 63.33
TraesCS1D01G159600.1 Wheat mitochondrion 65.84 62.64
TraesCS1B01G179500.2 Wheat mitochondrion 65.84 62.48
TraesCS1A01G162800.1 Wheat mitochondrion 65.84 62.27
GSMUA_Achr2P10680_001 Banana cytosol 65.23 58.56
CDY52239 Canola cytosol 54.02 51.13
CDY28777 Canola cytosol 53.31 50.38
CDY14319 Canola cytosol, plastid 53.57 50.37
CDY18321 Canola cytosol 53.13 49.88
CDX68955 Canola cytosol 20.21 44.04
CDX91798 Canola cytosol 18.89 42.46
CDY72648 Canola cytosol 9.53 39.71
CDX88973 Canola cytosol 30.27 29.19
CDY00546 Canola cytosol 30.1 28.39
CDX67724 Canola cytosol 29.3 27.1
CDX98274 Canola nucleus 29.39 26.81
CDX81833 Canola cytosol 33.8 26.14
CDY32922 Canola cytosol 34.6 26.01
CDY64313 Canola cytosol 34.69 25.84
CDY03315 Canola cytosol 33.19 25.56
CDY39766 Canola cytosol 33.1 25.51
CDY66597 Canola cytosol 34.25 25.49
CDX94736 Canola cytosol 34.33 25.46
CDY32531 Canola endoplasmic reticulum 33.89 25.41
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 34.51 25.39
CDY10075 Canola endoplasmic reticulum 33.8 25.28
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 33.8 25.26
CDY45087 Canola cytosol 34.33 25.11
CDX70927 Canola cytosol 34.33 25.0
CDY42350 Canola cytosol 32.66 24.62
CDX95235 Canola cytosol 33.19 24.48
CDY51846 Canola cytosol 34.16 24.48
CDY31978 Canola cytosol 33.01 24.32
CDX72393 Canola cytosol 32.04 24.1
CDY46128 Canola cytosol 31.86 24.03
CDY05734 Canola cytosol 33.27 23.89
CDX84752 Canola cytosol 32.74 23.77
CDX79446 Canola cytosol 32.66 23.76
CDY31130 Canola cytosol, mitochondrion 32.22 23.7
CDX79520 Canola endoplasmic reticulum 31.42 23.55
CDX75338 Canola cytosol 31.95 21.85
CDX84695 Canola cytosol 32.83 21.45
CDX86626 Canola cytosol 32.48 21.05
CDX93542 Canola cytosol 32.13 21.03
CDY15512 Canola cytosol 32.57 21.03
CDY19473 Canola cytosol 32.48 21.02
CDX95038 Canola cytosol 31.07 20.8
CDY65572 Canola plastid 34.07 20.31
CDY17154 Canola cytosol 32.74 20.3
CDY35211 Canola plastid 34.07 20.25
CDY69853 Canola endoplasmic reticulum 5.74 13.46
CDY71471 Canola cytosol 3.8 8.87
CDY65579 Canola endoplasmic reticulum 8.38 8.41
CDY16536 Canola cytosol 3.09 7.8
CDX92461 Canola cytosol 3.09 7.56
CDY69448 Canola extracellular, golgi, mitochondrion 1.68 5.76
CDX72394 Canola nucleus 0.26 0.3
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.2Gene3D:3.30.70.1590
Gene3D:3.40.850.10GO:A0A078HGT6UniProt:A0A078HGT6EnsemblPlants:CDY36068ProteinID:CDY36068ProteinID:CDY36068.1
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003779
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016459GO:GO:0016787GO:GO:0051015EnsemblPlantsGene:GSBRNA2T00059897001InterPro:IPR000048InterPro:IPR001609
InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo8
InterPro:Myosin_NInterPro:Myosin_S1_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612
PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF685
SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EF4279SEG:seg:
Description
BnaC03g41300DBnaC03g41300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGT6]
Coordinates
chrLK032366:-:317660..324315
Molecular Weight (calculated)
127784.0 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.443
Length
1133 amino acids
Sequence
(BLAST)
0001: MLFRPFFTPK LLLCGGEKMS QKVTPSMNSL KSLPADYRFD GSSVPRKGGL RNGVSPSDTA AEDSEDSPYS GDVEHQSLAN DMDTDAATVT LPQSDERRWS
0101: DTSAYARKKI LQSWIQLPNG KWELGKILST SGEESVLSLA EGKVIKVMSE TLVPANPDIL DGVDDLMQLS YLNEPSVLYN LNYRYNQDMI YTKAGPVLVA
0201: VNPFKEVPLY GSRYIEAYRK GSNDSPHVYA IADTAIREMI RDEVNQSIII SGESGAGKTE TAKIAMQYLA ALGGGSGIEY EILKTNPIIE AFGNAKTLRN
0301: DNSSRFGKLT EIHFSETGKI SGAQVQTFLL EKSRVVQCAE GERSYHIFYQ LCAGASPALR EKLNLKSAHE YKYLGQSNCY SINGVDDAER FHTVKEALDI
0401: VHVSKEDQES VFAMLAAVLW LGNVSFTVID NENHVEPVAY ESLLTVAKLI GCNSNDLKLS LSKRNMRVGK DTIVQKLTLP QAIDARDALA KSIYSCLFDW
0501: LVEQINKSLA VGKRRTGRSI SILDIYGFES FDKNSFEQFC INYANERLQQ HFNRHLFKLE QEEYIQDGID WTRVDFEDNQ DCLSLFEKKP LGLLSLLDEE
0601: STFPNGTDLT LANKLKQHLL SNSCFRGDRG KLFTVVHYAG EVTYETTGFL EKNRDFLHLD SIQLLSSCSC HLPQAFASSM LIQSEKPVVG PLHKAGGADS
0701: QRLSVATKFK GQLFQLMQRL GNTTPHFIRC IKPNNVQSPG LYEQGLVLQQ LRCCGVLEHL CKGPYNTFLL ELVSVAILHQ FNILPEMYQV GYTKLFFRTG
0801: QIGVLEDTRN RTLHGILRVQ SSFRGYKARC HLKELRMGIY TLQSFVRGEK VRKEFAYLRR RHRAAATIQS QVKSKIARQQ YKGITEASLV IQSAIRGWLV
0901: RRCSGDIGWL KSGEVLVKAS VLSELQRRVL KSEAALREKE EENDILQQRL QQYENRWSEY ETKMKSMEEI WQKQMRSLQS SLSIAKKSLA VENSARNSDA
1001: SVNASDWDSG SNQLKSQTSK GGGGERQQQQ QRPMSAGLSV IGRLAEEFEQ RAQVFGDDAK FLVEVKSGQV EANLNPDREL RRLKQMFETW KKDYGGRLRE
1101: TKMILSKLGS EESGGSMEKV KRKWWGRRNS TRY
Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)
0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY
Arabidopsis Description
ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.