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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037016.1-P Field mustard cytosol 99.87 99.6
CDX72393 Canola cytosol 96.4 96.15
CDX68955 Canola cytosol 31.23 90.19
AT4G33200.4 Thale cress cytosol 89.68 88.44
CDY69448 Canola extracellular, golgi, mitochondrion 18.77 85.45
CDY69853 Canola endoplasmic reticulum 27.3 84.89
CDX75338 Canola cytosol 89.48 81.11
Solyc08g061520.2.1 Tomato cytosol 23.77 76.94
VIT_04s0008g01990.t01 Wine grape cytosol 73.7 72.64
Os10t0395150-00 Rice plasma membrane 25.83 71.19
Zm00001d014239_P001 Maize cytosol 23.64 71.14
KRH52257 Soybean cytosol 71.17 70.28
KRH15597 Soybean cytosol 70.91 69.97
KRH61584 Soybean cytosol 70.84 69.82
TraesCS6B01G367000.1 Wheat cytosol 64.38 64.6
TraesCS6A01G336500.1 Wheat cytosol 64.31 64.53
Solyc08g061500.1.1 Tomato cytosol 44.74 64.49
TraesCS6D01G316500.1 Wheat cytosol 64.11 64.33
CDX91798 Canola cytosol 21.44 63.89
EES05882 Sorghum cytosol 64.51 63.75
HORVU6Hr1G081340.4 Barley cytosol 64.38 63.62
Zm00001d052110_P011 Maize cytosol 64.38 63.62
GSMUA_Achr3P07960_001 Banana cytosol 67.58 62.04
OQU91854 Sorghum cytosol 60.59 60.38
CDY72648 Canola cytosol 10.92 60.29
Os10t0395100-01 Rice cytosol 17.51 54.68
Os02t0777700-00 Rice cytosol 26.1 53.77
Os10t0339400-01 Rice cytosol 25.83 53.22
CDY66597 Canola cytosol 53.4 52.69
CDX81833 Canola cytosol 51.27 52.56
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.8 52.31
CDY32922 Canola cytosol 52.2 52.02
CDY45087 Canola cytosol 53.53 51.9
CDY31130 Canola cytosol, mitochondrion 53.06 51.75
CDY64313 Canola cytosol 52.33 51.68
CDX94736 Canola cytosol 52.46 51.57
CDX70927 Canola cytosol 53.4 51.54
CDY42350 Canola cytosol 51.53 51.5
CDX95235 Canola cytosol 52.6 51.43
CDY32531 Canola endoplasmic reticulum 51.46 51.16
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.4 51.1
CDY10075 Canola endoplasmic reticulum 51.4 50.96
CDY51846 Canola cytosol 53.46 50.79
CDY03315 Canola cytosol 47.8 48.81
CDY39766 Canola cytosol 47.54 48.57
CDX84752 Canola cytosol 49.4 47.53
CDX79446 Canola cytosol 49.2 47.46
Zm00001d014241_P001 Maize mitochondrion 15.65 47.28
CDY31978 Canola cytosol 47.0 45.9
CDX93542 Canola cytosol 52.0 45.12
CDY05734 Canola cytosol 46.6 44.36
CDX95038 Canola cytosol 49.73 44.15
CDX88973 Canola cytosol 34.29 43.83
CDY00546 Canola cytosol 34.29 42.88
CDX79520 Canola endoplasmic reticulum 42.48 42.2
CDX67724 Canola cytosol 33.69 41.31
CDX84695 Canola cytosol 47.27 40.95
CDX98274 Canola nucleus 33.69 40.74
CDY19473 Canola cytosol 47.14 40.43
CDY15512 Canola cytosol 47.0 40.23
CDY65572 Canola plastid 50.87 40.19
CDX86626 Canola cytosol 46.74 40.16
CDY35211 Canola plastid 50.8 40.03
CDY17154 Canola cytosol 47.34 38.9
CDX92461 Canola cytosol 11.52 37.37
CDY16536 Canola cytosol 11.05 36.97
CDY71471 Canola cytosol 11.78 36.49
CDY65579 Canola endoplasmic reticulum 25.83 34.37
CDY29324 Canola cytosol 25.03 32.75
CDY42506 Canola cytosol, plastid 24.83 32.46
CDY24591 Canola cytosol, plastid 25.03 32.44
CDY22791 Canola cytosol, plastid 24.7 32.07
CDY36068 Canola cytosol, mitochondrion 24.03 31.86
CDY53932 Canola cytosol, plastid 24.77 31.5
CDX82270 Canola cytosol 24.97 31.35
CDY28777 Canola cytosol 24.77 31.03
CDY52239 Canola cytosol 24.43 30.66
CDY18321 Canola cytosol 24.23 30.16
CDY14319 Canola cytosol, plastid 23.97 29.88
CDY25361 Canola cytosol 24.97 24.21
CDX72394 Canola nucleus 0.6 0.91
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.5.340Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.1
Gene3D:3.30.70.3240Gene3D:3.40.850.10GO:A0A078IAB0UniProt:A0A078IAB0EnsemblPlants:CDY46128ProteinID:CDY46128
ProteinID:CDY46128.1ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007015GO:GO:0007018
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0016459GO:GO:0016787
GO:GO:0051015EnsemblPlantsGene:GSBRNA2T00083295001InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009
InterPro:IPR008989InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBD
InterPro:Myosin_NInterPro:Myosin_S1_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612
PFAM:PF01843PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51126PFscan:PS51456
PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF534SMART:SM00015SMART:SM00242SMART:SM01132
SUPFAM:SSF52540UniParc:UPI0004EE5E1DSEG:seg:::
Description
BnaA03g52400DBnaA03g52400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAB0]
Coordinates
chrLK032650:+:179462..192806
Molecular Weight (calculated)
170664.0 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.412
Length
1502 amino acids
Sequence
(BLAST)
0001: MESNLRRGDK VWVEDKDSAW AAGEVLDSPG NKVHVETSTG KQVFVCSEKV FRRDPDEEDR NGVDDMTKLT YLHEAGVLYN LQRRYALNDI YTYTGSILIA
0101: VNPFKKLPHL YNGYMMEQYK GAPFGELSPH VFAVSEVAYR AMIDDRRSQS ILVSGESGAG KTETTKLIMQ YLTYVGGRAA EDNRSVEQQV LESNPLLEAF
0201: GNAKTVRNDN SSRFGKFVEI QFDANGRISG AAIRTYLLER SRVVRITDPE RNYHCFYQLC ASGSDAKKYK LSNPHQFHYL NQSKTYDLEG VSNAEEYKNT
0301: RRAMDIVGIS HDEQESIFRT LAAILHLGNV EFSSGKEHDS SVVKDQESRN HLQMAADLFR CDANLLLASL CTRSILTREG TIIKALDCNA AVTSRDALAK
0401: TVYARLFDWL VDKINRSVGQ DPNSHFQIGV LDIYGFECFK SNSFEQFCIN FANEKLQLHF NEHVFKMEQD EYRKEEINWS FIEFIDNQDV VDLIEKKPIG
0501: VIALLDEACM FPRSTHESFS MKLFQNCKSH PRLEKTKFSE TDFTLSHYAG KAMEHCNLLS SSRCPFVAGL FASAPEESAR SSYKFSSVSS RFKQQLQALM
0601: ETLSKTEPHY VRCVKPNTLN RPQKFENLSV LHQLRCGGVL EAVRISLAGY PTRRYYSDFV DRFGLLAPEL MDESNDEQAL TEKILRKLGL GNYQLGRTKV
0701: FLRAGQIGIL DSRRTEVLDA SARLIQRRLR TFVTHQNFIA ARACAISIQA YCRGCLSRNA YVARRNEAAA VLVQKHARRW LSRCAYVKLV SAASVIQSCI
0801: RADSARLKFA HQKEHRAASL IQARWRVHKF HTAFRHRQSS IIAIQCCWRQ KLAKRESRKL KRAANEAGAL RLAKTKLEKR LEDLEWRLQL EKRLRTSGEE
0901: AKSGEISKLQ KTLESFSLKL DAARLATINE CNKNAVLQKQ LDISMKEKAA VERELNGMVE LEKDNTSLKN SMNSLEKKNL SLEKELLSAK TDCNNTLQKL
1001: KEADNRCSEL QTSVQSLEEK LSHLENENHV LRQKTLRISP ERIGRMLGEK HSSDVVPAQI DRTSVFETPT PSKRIMPFSR SLSESRRPKF TAERNVDIHE
1101: LLSRCIKENL GFNDDKPLAA CVIYTCLLHW HAFESESTAI FNIIIEGINE ALKVGDENSV LPYWLSNTSA LLCLLQRNLR TNSFLNASVQ RSGRAASGVK
1201: SPFKVNGPDD GVPHIEARYP AILFKQHLTA CMEKIYGLIR DNLKKELAPL LGLCIQAPKA LRGTAGKSSR LPSDVPQRSP SSQWENILKF LDSLMSRLRE
1301: NHVPSFFIRK LVTQVFSFIN LSLFNSLLLR RECCTFSNGE YVKSGITELE KWISGVKEEF SGTSWHELSF IRQAVGFLVI HQKRRKSLDE ISQDLCPALT
1401: IRQIYRISTL YWDDKYGTQS VSSEVVSQMR VLVDKDSSQK LTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS EYTCAQSLVK KPSATSVSKQ
1501: IL
Best Arabidopsis Sequence Match ( AT4G33200.1 )
(BLAST)
0001: MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT
0101: GSILIAVNPF KKLPHLYNGH MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF VGGRATDDDR SVEQQVLESN
0201: PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA
0301: EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS
0401: RDTLAKTVYA HLFDWLVDKI NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK EEINWSYIEF IDNQDVLDLI
0501: EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES
0601: TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ
0701: ALTEKILSKL GLGNYQLGRT KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR NAYATRRNAA AAVLVQKHVR
0801: RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE
0901: KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK
1001: NRVLEKELLN AKTNCNNTLQ KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVLMQKTLIT SPERIGQILG EKHSSAVVPA QNDRRSVFET PTPSKHIMPF
1101: SHSLSESRRS KLTAERNLEN YELLSRCIKE NLGFNDDKPL AACVIYKCLL HWRAFESEST AIFNIIIEGI NEALKGGDEN GVLPYWLSNA SALLCLLQRN
1201: LRSNSFLNAS AQRSGRAAYG VKSPFKLHGP DDGASHIEAR YPALLFKQQL TACVEKIYGL IRDNLKKELS PLLGSCIQAP KASRGIAGKS RSPGGVPQQS
1301: PSSQWESILK FLDSLMSRLR ENHVPSFFIR KLVTQVFSFI NLSLFNSLLL RRECCTFSNG EYVKSGISEL EKWIANAKEE FAGTSWHELN YIRQAVGFLV
1401: IHQKKKKSLD EIRQDLCPVL TIRQIYRIST MYWDDKYGTQ SVSSEVVSQM RVLVDKDNQK QTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS
1501: EYTCAQSLVK KPSIASTSKQ II
Arabidopsis Description
XI-Imyosin, putative [Source:TAIR;Acc:AT4G33200]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.