Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39766 | Canola | cytosol | 98.56 | 32.52 |
| CDY03315 | Canola | cytosol | 98.14 | 32.36 |
| CDY31978 | Canola | cytosol | 82.27 | 25.94 |
| CDX92461 | Canola | cytosol | 23.92 | 25.05 |
| CDY05734 | Canola | cytosol | 81.24 | 24.97 |
| CDY16536 | Canola | cytosol | 23.09 | 24.94 |
| CDY69448 | Canola | extracellular, golgi, mitochondrion | 16.91 | 24.85 |
| CDX94736 | Canola | cytosol | 58.97 | 18.72 |
| CDY32922 | Canola | cytosol | 57.94 | 18.65 |
| CDY22325 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.18 | 18.64 |
| CDY65579 | Canola | endoplasmic reticulum | 43.3 | 18.6 |
| CDY64313 | Canola | cytosol | 57.94 | 18.47 |
| CDY10075 | Canola | endoplasmic reticulum | 56.49 | 18.09 |
| CDY32531 | Canola | endoplasmic reticulum | 56.29 | 18.07 |
| CDY65572 | Canola | plastid | 63.09 | 16.1 |
| CDY35211 | Canola | plastid | 63.09 | 16.05 |
| CDY42350 | Canola | cytosol | 46.19 | 14.9 |
| CDX95235 | Canola | cytosol | 46.19 | 14.58 |
| CDY31130 | Canola | cytosol, mitochondrion | 45.98 | 14.48 |
| CDX81833 | Canola | cytosol | 43.3 | 14.33 |
| CDX70927 | Canola | cytosol | 44.95 | 14.01 |
| CDY66597 | Canola | cytosol | 43.71 | 13.93 |
| CDY21744 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.51 | 13.92 |
| CDY51846 | Canola | cytosol | 44.95 | 13.79 |
| CDY45087 | Canola | cytosol | 43.92 | 13.75 |
| CDY69853 | Canola | endoplasmic reticulum | 13.61 | 13.66 |
| CDX95038 | Canola | cytosol | 44.54 | 12.77 |
| CDX84752 | Canola | cytosol | 40.41 | 12.56 |
| CDX79446 | Canola | cytosol | 40.21 | 12.52 |
| CDX93542 | Canola | cytosol | 44.54 | 12.48 |
| CDX84695 | Canola | cytosol | 44.33 | 12.4 |
| CDY15512 | Canola | cytosol | 43.51 | 12.02 |
| CDX86626 | Canola | cytosol | 43.3 | 12.01 |
| CDY19473 | Canola | cytosol | 43.09 | 11.94 |
| CDY46128 | Canola | cytosol | 36.49 | 11.78 |
| CDX72393 | Canola | cytosol | 36.29 | 11.69 |
| CDY17154 | Canola | cytosol | 43.09 | 11.43 |
| CDX75338 | Canola | cytosol | 38.35 | 11.23 |
| CDX79520 | Canola | endoplasmic reticulum | 24.74 | 7.94 |
| CDX98274 | Canola | nucleus | 10.52 | 4.11 |
| CDX67724 | Canola | cytosol | 10.31 | 4.08 |
| CDY36068 | Canola | cytosol, mitochondrion | 8.87 | 3.8 |
| CDY24591 | Canola | cytosol, plastid | 8.87 | 3.71 |
| CDY00546 | Canola | cytosol | 9.07 | 3.66 |
| CDX88973 | Canola | cytosol | 8.87 | 3.66 |
| CDY28777 | Canola | cytosol | 8.66 | 3.5 |
| CDY14319 | Canola | cytosol, plastid | 8.66 | 3.49 |
| CDY29324 | Canola | cytosol | 8.25 | 3.48 |
| CDX82270 | Canola | cytosol | 8.45 | 3.43 |
| CDY52239 | Canola | cytosol | 8.45 | 3.43 |
| CDY18321 | Canola | cytosol | 8.45 | 3.4 |
| CDY42506 | Canola | cytosol, plastid | 8.04 | 3.39 |
| CDY53932 | Canola | cytosol, plastid | 8.25 | 3.39 |
| CDY22791 | Canola | cytosol, plastid | 8.04 | 3.37 |
| CDY25361 | Canola | cytosol | 8.87 | 2.78 |
| CDY72648 | Canola | cytosol | 0.62 | 1.1 |
| CDX91798 | Canola | cytosol | 0.62 | 0.6 |
| CDX68955 | Canola | cytosol | 0.62 | 0.58 |
| CDX72394 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY71471 | EnsemblPlantsGene:GSBRNA2T00016524001 | InterPro:Dilute_dom | InterPro:IPR002710 | ncoils:Coil | PANTHER:PTHR13140 |
| PANTHER:PTHR13140:SF256 | PFAM:PF01843 | PFscan:PS51126 | ProteinID:CDY71471 | ProteinID:CDY71471.1 | SEG:seg |
| SMART:SM01132 | UniParc:UPI0004EE9C46 | UniProt:A0A078K103 | MapMan:35.1 | : | : |
Description
BnaCnng73070DBnaCnng73070D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K103]
Coordinates
chrLK045976:-:129..2634
Molecular Weight (calculated)
54750.0 Da
IEP (calculated)
6.066
GRAVY (calculated)
-0.324
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: KLEKQVEDLT LRLQLEKRMR VDVEESKTQE NAKLQLALKE IQLQFKETEV SLLKEVEAAK KTAEIVPPVV KEEIPIVVDT ELVEKLKSEN DNLKSMVSSL
101: EQKIDETEKK FKEKVKQALE AEDKIVNLKT AMHKLQETLE DVINENHVLK QSALSTPVKT ASGRFFPSTP VKNLQNAEEN QLAGTMFTTP ARIQESRGGS
201: HIDPQNEDVD DLINCVTKNV GFSQGKPVAA FTIYKCLLHW KSFEAERTNV FDRLIQMIGS AIKNEEDNAN LAYWLSNTST LLFMLQQSLR SGGTGATPLR
301: KSPSLVRWMT KGFRSPAAEA IRPVDAKAPA LHFKQQLAAY VEKIIEIMWD KLKKELNTSL TLCIQAPKTF KGTALMSDST AKYWQGIIEG LDALLSTLKE
401: NFVPLVLIQK ILSQAFSLIN VQLWNSVMTR PDNCSFINGE YLKSGLEKLE NWCLETNDEY AGSSWDELKH IRQAVGFLVC SELVF
101: EQKIDETEKK FKEKVKQALE AEDKIVNLKT AMHKLQETLE DVINENHVLK QSALSTPVKT ASGRFFPSTP VKNLQNAEEN QLAGTMFTTP ARIQESRGGS
201: HIDPQNEDVD DLINCVTKNV GFSQGKPVAA FTIYKCLLHW KSFEAERTNV FDRLIQMIGS AIKNEEDNAN LAYWLSNTST LLFMLQQSLR SGGTGATPLR
301: KSPSLVRWMT KGFRSPAAEA IRPVDAKAPA LHFKQQLAAY VEKIIEIMWD KLKKELNTSL TLCIQAPKTF KGTALMSDST AKYWQGIIEG LDALLSTLKE
401: NFVPLVLIQK ILSQAFSLIN VQLWNSVMTR PDNCSFINGE YLKSGLEKLE NWCLETNDEY AGSSWDELKH IRQAVGFLVC SELVF
0001: MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE
0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ
0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL
0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN
0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY
0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP
0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS
0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ
0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA
0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE
1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES
1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS
1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL
1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI
1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH
0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ
0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL
0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN
0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY
0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP
0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS
0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ
0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA
0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE
1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES
1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS
1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL
1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI
1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH
Arabidopsis Description
XI-GMyosin-13 [Source:UniProtKB/Swiss-Prot;Acc:F4IUG9]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.