CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28777	Canola	cytosol	96.41	96.25
CDY14319	Canola	cytosol, plastid	89.22	88.63
AT5G54280.2	Thale cress	cytosol	90.31	88.61
CDY18321	Canola	cytosol	88.89	88.15
KRH13051	Soybean	cytosol	16.71	74.63
KRH22163	Soybean	cytosol	64.49	64.55
KRH27175	Soybean	cytosol	64.41	64.41
VIT_19s0014g03640.t01	Wine grape	cytosol	62.24	62.24
KRH55425	Soybean	cytosol	58.98	60.14
KRH26031	Soybean	cytosol	59.23	60.08
Solyc07g063590.2.1	Tomato	cytosol	55.89	56.31
CDY24591	Canola	cytosol, plastid	53.13	54.87
CDY42506	Canola	cytosol, plastid	52.21	54.4
CDY22791	Canola	cytosol, plastid	52.38	54.19
PGSC0003DMT400049643	Potato	cytosol	26.73	54.05
Solyc10g006820.2.1	Tomato	cytosol	54.3	54.03
CDY36068	Canola	cytosol, mitochondrion	51.13	54.02
CDY29324	Canola	cytosol	51.46	53.66
EER99532	Sorghum	cytosol	55.3	53.47
CDX82270	Canola	cytosol	52.97	53.01
Zm00001d006593_P003	Maize	cytosol	54.72	52.78
Os07t0562800-01	Rice	plasma membrane	54.89	52.48
TraesCS2A01G204700.1	Wheat	cytosol, plastid	54.47	51.62
CDY53932	Canola	cytosol, plastid	50.88	51.57
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	54.22	51.1
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	54.22	51.02
Zm00001d021785_P002	Maize	cytosol, plastid	50.04	50.42
GSMUA_Achr8P03790_001	Banana	cytosol	54.05	47.78
CDX68955	Canola	cytosol	18.88	43.46
CDX91798	Canola	cytosol	17.63	41.87
CDY25361	Canola	cytosol	52.88	40.87
CDY72648	Canola	cytosol	9.02	39.71
CDX88973	Canola	cytosol	27.99	28.51
CDY00546	Canola	cytosol	27.99	27.89
CDX67724	Canola	cytosol	28.4	27.76
CDX98274	Canola	nucleus	28.57	27.54
CDX81833	Canola	cytosol	33.33	27.24
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.42	26.39
CDY03315	Canola	cytosol	31.75	25.83
CDY32922	Canola	cytosol	32.41	25.75
CDY39766	Canola	cytosol	31.58	25.71
CDY64313	Canola	cytosol	32.41	25.51
CDY66597	Canola	cytosol	32.16	25.3
CDY10075	Canola	endoplasmic reticulum	31.83	25.15
CDY45087	Canola	cytosol	32.5	25.11
CDY42350	Canola	cytosol	31.5	25.08
CDY32531	Canola	endoplasmic reticulum	31.66	25.08
CDX94736	Canola	cytosol	32.0	25.07
CDX70927	Canola	cytosol	32.5	25.0
CDX95235	Canola	cytosol	32.0	24.93
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.0	24.87
CDY31130	Canola	cytosol, mitochondrion	31.75	24.68
CDX79446	Canola	cytosol	32.0	24.6
CDY51846	Canola	cytosol	32.33	24.48
CDX72393	Canola	cytosol	30.74	24.44
CDY46128	Canola	cytosol	30.66	24.43
CDX84752	Canola	cytosol	31.83	24.41
CDY31978	Canola	cytosol	31.33	24.38
CDY05734	Canola	cytosol	31.66	24.02
CDX79520	Canola	endoplasmic reticulum	29.16	23.08
CDX75338	Canola	cytosol	31.08	22.45
CDX86626	Canola	cytosol	31.33	21.45
CDX93542	Canola	cytosol	30.91	21.37
CDY15512	Canola	cytosol	31.33	21.37
CDX84695	Canola	cytosol	30.91	21.34
CDX95038	Canola	cytosol	29.91	21.16
CDY19473	Canola	cytosol	30.91	21.13
CDY17154	Canola	cytosol	31.5	20.62
CDY65572	Canola	plastid	31.66	19.94
CDY35211	Canola	plastid	31.5	19.78
CDY69853	Canola	endoplasmic reticulum	6.77	16.77
CDY71471	Canola	cytosol	3.43	8.45
CDY65579	Canola	endoplasmic reticulum	7.69	8.15
CDX92461	Canola	cytosol	2.84	7.34
CDY16536	Canola	cytosol	2.42	6.46
CDY69448	Canola	extracellular, golgi, mitochondrion	1.34	4.85
CDX72394	Canola	nucleus	0.42	0.51

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078IS10	UniProt:A0A078IS10	EnsemblPlants:CDY52239	ProteinID:CDY52239	ProteinID:CDY52239.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	EnsemblPlantsGene:GSBRNA2T00005209001	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8
InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF702
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0004EE2E25	SEG:seg	:

Description

BnaC02g44600DBnaC02g44600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS10]

Coordinates

chrLK033070:-:25685..31833

Molecular Weight (calculated)

136148.0 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.568

Length

1197 amino acids

Sequence
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PRDVPPALPS RPNSRARLPS ARRSLPAKFN VSSVMEDQNQ NGKEETEPEI KEEGKRKEKD LGVKRKSFGS
0101: KKMRTGYGSE SPYVVEEEGV KVVSAAKVGP VEEQRPEWNN NVDYFINKKL RVWCRVANGE WQLGKIQSTS ADTSLVMLST ADVVKVSTEE LFPANPDILE
0201: GVEDLIQLSY LNEPSVLYNL RVRYSQDVIY SKAGPVLIAV NPFKNVQICG NDIISAYQKK DVDAPHVYAV ADAAYDEMMR EEKNQSIIIS GESGAGKTET
0301: AKYAMQYLAA LGGGSCGVEY EILKTTSILE AFGNAKTSRN ANSSRFGKLI EIHFSAMGKI CGAKLETFLL EKSRVAQLFN GERSYHIFYE LCAGASPILK
0401: ERLKLKTASE YTYLNQSDCL TIDGVDDAQK FRKLLEAFDI VQIPKEHQER VFALLAAVLR LGNVSFRVTD NENHVEVVAD EAVTNAAMLM GCNSEELMVV
0501: LSTRKLQAGA DCIAKKLTLR QATDMRDGIA KFIYESLFEW LVEQINIALE DGKSRTGRSI SILDIYGFES FKNNSFEQFC INYANERLQQ HFNRHLFKLE
0601: QEEYEEDGID WTKVDFEDNQ ECLDLIEKKP IGLLSLLDEE SNFPKATDLT FANKLKQHLK TNSCFKGERG RAFRVNHYAG EVLYDTNGFL EKNRDPLPAD
0701: LIHLLASCDC QLLKLFSTKM RNKSQKPLML SDSTNQTVGT KFKGQLFKLM NTLENTTPHF IRCIKPNSKQ LPRVYEEDLV LQQLRCCGVL EVVRISRSGY
0801: PTRLTHQEFA GRYGFLLADK KVSQDPLSVS IAVLKQYDVH PEMYQVGYTK LYLRTGQIGI FEDRRKEVLQ GIVGLQKRFR GHLSREYFQS VRNGASVLQS
0901: YVRGEIGRRM FDIEAKLHAD SVTEASTGEL TAVIHLQSAV RGWLARKRFN SMQRQKELLN VTTLSKKRAG LRISEDKEEF QVQPSAMSDL QKRVLESETA
1001: FVQKEEENAA LREQLKQFEE KWSEYEIKMK SMEETWQKQM SSLQMSLAAA RKSLATENVT GQAGGRQDTS TSPFGYESED TTSTTATPGL RTPTTNFTNG
1101: NTPELRSREL NGSLNAVNHL AREFDQRRLN FDEDARAIVE VKVEPEATGQ QQQHPEDEFR RLKLRFETWK KDYKARLRET KARLHSDKRR HRKWWGK

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.