CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26031	Soybean	cytosol	91.74	91.27
KRH13051	Soybean	cytosol	17.12	75.0
KRH22163	Soybean	cytosol	73.25	71.91
KRH27175	Soybean	cytosol	73.0	71.6
VIT_19s0014g03640.t01	Wine grape	cytosol	64.57	63.33
CDY52239	Canola	cytosol	60.14	58.98
CDY28777	Canola	cytosol	59.8	58.55
AT5G54280.2	Thale cress	cytosol	60.73	58.44
Bra022708.1-P	Field mustard	cytosol	60.22	58.38
Bra002998.1-P	Field mustard	cytosol, plastid	59.8	58.26
CDY14319	Canola	cytosol, plastid	59.71	58.17
CDY18321	Canola	cytosol	59.71	58.08
Solyc07g063590.2.1	Tomato	cytosol	56.39	55.72
AT4G27370.2	Thale cress	cytosol	53.83	55.63
PGSC0003DMT400049643	Potato	cytosol	27.26	54.05
Bra031394.1-P	Field mustard	cytosol	30.83	53.55
Solyc10g006820.2.1	Tomato	cytosol	54.09	52.78
KRG90612	Soybean	cytosol	52.38	52.56
KRH36145	Soybean	cytosol	52.56	52.47
KRH40907	Soybean	cytosol	51.79	51.97
KRG89103	Soybean	cytosol	51.96	51.87
EER99532	Sorghum	cytosol	54.26	51.45
Zm00001d006593_P003	Maize	cytosol	53.32	50.44
Os07t0562800-01	Rice	plasma membrane	53.66	50.32
TraesCS2A01G204700.1	Wheat	cytosol, plastid	53.15	49.41
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	53.24	49.21
Bra026355.1-P	Field mustard	cytosol	52.13	49.2
Zm00001d021785_P002	Maize	cytosol, plastid	49.74	49.16
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	53.07	48.98
GSMUA_Achr8P03790_001	Banana	cytosol	52.81	45.79
KRH32145	Soybean	cytosol	28.71	33.2
KRH19523	Soybean	cytosol	29.39	32.03
KRH19248	Soybean	cytosol	33.82	25.95
KRH02661	Soybean	cytosol	33.73	25.88
KRG92711	Soybean	cytosol	33.65	25.77
KRH34117	Soybean	cytosol	33.56	25.72
KRH15597	Soybean	cytosol	33.22	25.62
KRH52257	Soybean	cytosol	32.45	25.05
KRH32270	Soybean	cytosol	32.11	24.9
KRH19659	Soybean	cytosol	32.2	24.88
KRH61584	Soybean	cytosol	32.2	24.8
KRG95788	Soybean	cytosol	32.03	24.79
KRH67505	Soybean	cytosol	31.77	24.67
KRH68770	Soybean	cytosol	31.6	24.49
KRH13822	Soybean	cytosol	31.35	23.23
KRG89126	Soybean	cytosol	30.32	22.52
KRH43634	Soybean	cytosol	31.35	22.22
KRH40872	Soybean	cytosol	30.75	21.63

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100802614	Gene3D:2.30.30.360	MapMan:20.2.4.2
Gene3D:3.30.70.3240	Gene3D:3.40.850.10	EMBL:ACUP02004004	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G254500	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	UniProt:I1KE52	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KRH55425	ProteinID:KRH55425	ProteinID:KRH55425.1	InterPro:Kinesin_motor_dom_sf
InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063
PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF702	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000233A732	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:43331150..43344133

Molecular Weight (calculated)

133416.0 Da

IEP (calculated)

8.859

GRAVY (calculated)

-0.534

Length

1174 amino acids

Sequence
(BLAST)

0001: MVLSASPCSL ARSSLEEMLD SLRRRDEEEE RKKDSPPALP ARPASRARLP PARRSLPNNF KVSGSELAVA PEHGAGTNGE NDLGQKRRRN GFGSKRVNKD
0101: VESPYVELSS SDSSGMIWEL EGDDSVSYFI KKKLRVWSRQ PRGQWELGTI QSTSGEEASI SLSNGNVMKV VRSEILPANP DVLEGADDLN KLCYLNEPSV
0201: LHNLKLRYSQ GMIYSKAGPI LIALNPFKDL QTYGNDSVSA YRQRIIDSPH VYAVADTAYN KVIRDEVNQS IIISGESGSG KTETAKIALQ YLAALGGGGS
0301: CAIENEFLQI NRILEAFGNA KTSRNNNSSR FGKLIEVHFS SMGKICGAKI QTLMLEKSRV VQLANGERSY HIFYQLCTGS SSGLKERLNL RAVSEYKYLV
0401: QSDCTLIDGV NDANNFHQLM KALDTVQICK EDQEMIFKML AAILWLGNIS FQVDSENHIE VVDDEAVTST AQLMGCSSQE LMTALCTLKT QFDEDTIAKN
0501: LTLRQATERR DAIAKFIYAS LFDWLVEQVN KSLEVGKPHT GKSISILDIY GFQTFQKNSF EQFYINYANE RIQQHFNRHL FKLEQEDYEL DGVDWTKVDF
0601: EDNEGCLDLF EKKPHGLFSL LDEESNLAKA SDLTFANKLR HHLGANPCFK GERGRAFRVR HYAGEVLYDT NDFLEKNRDT LSSDSIQFLS SCNCELLQLL
0701: SKMFNQSQKQ SVATKFKVQL FKLMQKLEST TPHFIRCIKP NSKDLPGIFD EGLVLQQLRC CEVLEVVRLS RAGYPIRMGH QEFSRRYGFL LSEANISQDP
0801: LSISVAVLQK FYIPYEMYHV GYTKLYLRAG QIDALENKRK QVLQGILEIQ KCFRGHQARG YFCELKNGMT TLQSFIRGEN TRRRYGVMVK SSITIYSRKL
0901: EEIHAIILLQ SVIRGWLVRR DASHVNRSKR YPENAKPRRK SFMKIIPEVK DLSKEPVQNL LSALAGLQRR VDKADAIVEQ KEEENTELRE QLRQSERKRI
1001: EYETKMKSME EAWQKQMASL QMSLVAARKS LAPENATVQP VRRDFVLPRG YDSEDATSMG SQTPGGSTPM LSGSLSVSDA GRQVNGTLTT VGNLMKEFEQ
1101: QRQNFDDEVK ALNEVKPEQS ANMNSFEELR KLKQKFEGWK NQYKVRLRET KTRLYKSETE KSRRSWWGKF SSKA

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.