Factsheet for Bra026355.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031394.1-P	Field mustard	cytosol	51.37	94.53
AT4G27370.2	Thale cress	cytosol	68.25	74.74
KRH13051	Soybean	cytosol	15.92	73.88
Bra002998.1-P	Field mustard	cytosol, plastid	60.13	62.07
Bra022708.1-P	Field mustard	cytosol	59.57	61.19
KRH22163	Soybean	cytosol	52.89	55.02
KRH27175	Soybean	cytosol	52.41	54.47
VIT_19s0014g03640.t01	Wine grape	cytosol	50.96	52.97
KRH55425	Soybean	cytosol	49.2	52.13
KRH26031	Soybean	cytosol	48.79	51.44
Bra001768.1-P	Field mustard	cytosol	44.86	49.12
Bra035834.1-P	Field mustard	cytosol	45.42	49.05
Solyc07g063590.2.1	Tomato	cytosol	46.06	48.23
Bra018844.1-P	Field mustard	cytosol	44.61	48.18
Bra039641.1-P	Field mustard	cytosol	44.13	47.82
EER99532	Sorghum	cytosol	45.74	45.96
Os07t0562800-01	Rice	plasma membrane	46.14	45.85
Solyc10g006820.2.1	Tomato	cytosol	44.21	45.72
PGSC0003DMT400049643	Potato	cytosol	21.7	45.61
Zm00001d006593_P003	Maize	cytosol	45.26	45.37
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	45.02	44.09
TraesCS2A01G204700.1	Wheat	cytosol, plastid	44.61	43.94
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	44.77	43.79
Zm00001d021785_P002	Maize	cytosol, plastid	41.24	43.18
GSMUA_Achr8P03790_001	Banana	cytosol	46.06	42.32
Bra014582.1-P	Field mustard	cytosol	25.32	26.81
Bra003324.1-P	Field mustard	cytosol	25.48	25.73
Bra027512.1-P	Field mustard	cytosol	24.04	24.31
Bra011426.1-P	Field mustard	cytosol	29.18	23.93
Bra036688.1-P	Field mustard	cytosol	27.49	23.67
Bra030993.1-P	Field mustard	cytosol	28.62	23.58
Bra032526.1-P	Field mustard	cytosol	27.81	23.01
Bra037016.1-P	Field mustard	cytosol	27.65	22.84
Bra036460.1-P	Field mustard	cytosol	27.17	22.72
Bra027968.1-P	Field mustard	cytosol	27.65	22.65
Bra020105.1-P	Field mustard	cytosol	27.73	22.59
Bra006561.1-P	Field mustard	cytosol	27.81	22.51
Bra011053.1-P	Field mustard	cytosol	27.25	22.51
Bra033704.1-P	Field mustard	cytosol, plastid	28.46	21.35
Bra030739.1-P	Field mustard	cytosol	26.29	21.06
Bra018605.1-P	Field mustard	cytosol	27.57	19.43
Bra030576.1-P	Field mustard	cytosol	25.4	18.69
Bra022871.1-P	Field mustard	cytosol	27.73	15.62
Bra002304.1-P	Field mustard	cytosol	1.85	5.28

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra026355	EnsemblPlants:Bra026355.1	EnsemblPlants:Bra026355.1-P	ncoils:Coil
InterPro:Epimerase_deHydtase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0050662	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M4EC46	InterPro:MYSc_Myo8	InterPro:Myosin_N
InterPro:Myosin_head_motor_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01370
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF702
SMART:SM00015	SMART:SM00242	SUPFAM:SSF51735	SUPFAM:SSF52540	UniParc:UPI0002545B0D	SEG:seg

Description

AT4G27370 (E=0.0) VIIIB, ATVIIIB | VIIIB; motor

Coordinates

chrA01:-:9824242..9831797

Molecular Weight (calculated)

141834.0 Da

IEP (calculated)

7.054

GRAVY (calculated)

-0.488

Length

1244 amino acids

Sequence
(BLAST)

0001: MTIPPSPTMK ATPEETMESL SQHDDACERL KDYKSPSLPS RRTSQMPSNR QSLPTSLRDT ICPERETKEK DCRTEPISEP EWVNNVEFFI TKKLGVWCRG
0101: RNGEWHLGKI QSASGDAACV VLSTTEVVEV SMKEILPANP DVLEGVDDLI QLSYLNEPSV LYNLRVRYSQ DLIYSKAGPV LIAVNPFKNV QIYGNDIRSA
0201: YQKKALVAPH VYAVADAAFD EMMREEKNQS IIISGESGAG KTETAKYAMQ YLEALGGGNF GVDNEILKTN CILEAFGNAK TSRNDNSSRF GKLMEIHFSA
0301: KGKICGAKLE TCASPILKER LNLKEASEYN YLNQSNCLTI DRIDDAQKFH KLMEAFNIVQ IPQEHQERAF ALLAAVLWLG NVSFEVIDNE NHVDVVADEA
0401: VTNVAMLMGC DSKELMVVLS TCKLQAEIRI ARIFNTYGPR MNIDVGRVGS NFIPQALRGD ALTIQKPGTQ TRSFCYLSDM VEGDDTGPIN IGNPGGFAMV
0501: ELAETVKEEA FNIVQIPQEH QERAFALLAA VLWLGNVSFE VIDNENHVDV VADEAVTNVA MLMGCDSKEL MVVLSTCKLQ AGRDCIAKRL TLPQATDMRD
0601: SLAKIIYASL FNWLVEQINT SLEVGKLRTG RSISILDIYG FESFKNNSFE QFCINYANER LQQHFNRHLF KLEQEEYEGD GIDWTKVEFK DNQECLDLIE
0701: KKPIGLVSLL DEESNFPKAT DTTFANKLKH HLKANSCFRG ERRGHGFRVS HYAGEVLYDT NGFLEKNRDP LHVDLIQLLS SCNCQLLNLF SSKMRDKSLK
0801: PSLSESMNQS VITKFKSQLF KLMNKLEDTT PHFIRCIKPN SNHLPGVYEE NHVLQQLRCC GVLEIVRISR SGYHTRMTHQ DLAARYGFLL DTKLSQDPLS
0901: TSDSIMKQFN LPPEMYQVGY RKIYLRTGQI GLLEERREYV LQGVIGLQKH LRGYKSREYF HNMKKSALIL QSYIRGENAR RNYIAMQTPA TVSSEVTKEL
1001: DAVIHLQSVV RRWFVRKQLK NSVELKKQSH NEKKKTRRKS RRKVSEVKDL PLEQFQVQPW DLADLQSRVQ KVETAIMQKE DENTALKEEL QRFEERWIKH
1101: ETRMKSMEET WQKHISSMQM SLEAACNIMT PDKTASHGND SEDTISPGTP TKELKGGSLD DIKDIYVEVD QRRVVFDEDV KRHVEIDELE QVSIAIEKQH
1201: AEEELSRLKS RFEKWKKDYK ARLRGTKARL RLNGHRNWCG KKSF

Best Arabidopsis Sequence Match ( AT4G27370.3 )
(BLAST)

0001: MMKSSVKEIL ESLRLLDSSE RSSSLPSPST FRAPMPLIRQ SLPAKFRNAI SLESKTIEKE DKDWSTEQIT QSAEKEKTGN EVVKISTAQM SRAKNSHDPE
0101: WINSAEYFVR EKLCVWCRVA ANGQWHLGKI HSTSSSDDVC VMLSANDDVV KVAMEEIFPA NPEILEGVED LTQLSYLNEP SLLYNLRVRY SQDLIYSKAG
0201: PVLIAVNPFK NVQIYGEEFL SAYQKNALDA PHVYAVADAA YDDMMREEKN QSIIISGESG AGKTETAKYA MQYLEALGGG SFGVENEILK TNCILEAFGN
0301: AKTSRNDNSS RFGKLMEIHF SAKGKICGAK LETFLLEKSR VAQLCNGERC YHIFYQLCAG ASPILKERLK IKAASEYNYL NQSNCLTIDR TDDAQKFHKL
0401: MEAFNIVQIP QEYQERTFAL LAAVLWLGNV SFEVIDNENH VEVVADEAVT NVAMLMGCNS KKLMVVLSTC KLQAGRDCIA KRLTLRQATD MRDSLAKIIY
0501: ASLFNWLVEQ INISLEVGNS RTGRSISILD IYGFESFKDN SFEQFCINYA NERLQQHFNR HLFKLEQEEY EGDGIDWTKV EFIDNQECLN LIEKKPIGLV
0601: SLLNEESNFP KATDTTFANK LKQHLNANSC FKGERGRGFR IKHYAGEVLY NTNGFLEKNR DPLHVDLIQL LSLCKCQLLN LFSTKMHHDF LKPATFSDSM
0701: NQSVIAKFKG QLFKLMNKLE DTTPHFIRCI KPNSNQLPGL YEENHVLQQL RCCGVLEIVR ISRSGYPTRL THQELAVRYG CLLLDTRISQ DPLSTSKAIL
0801: KQCNLPPEMY QVGYTKIYLR TGVISVLEER KKYVLRGILG LQKQFRGYQT REYFHNMRNA AVILQSYIRG ENARRNYIVV GESAIVSTAI TKELDAAIHL
0901: QYMVRKWLAR KLLNSTQQKN KPRNEKKKTR RKSTKRVSED KELLSEQFEV QPCVLADLQS RVLKVEAAIM QKEDENTALQ EELQRFEERW LENETRMKSM
1001: EDTWQKHMSS MQMSLAAACK VLAPDKTASH GTDSEDTMSF GTPTKELKGS LSDVNNLSTE FDQRSVIIHE DPKSLVEVKS DSISNRKQHA EELRRLKSRF
1101: EKWKKDYKTR LRETKARVRL NGDEGRHRNW WCKKSY

Arabidopsis Description

VIIIBP-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G27370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.