Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014582.1-P Field mustard cytosol 99.91 99.91
CDY00546 Canola cytosol 96.43 94.34
AT3G58160.1 Thale cress cytosol 89.45 84.62
CDX67724 Canola cytosol 86.89 83.35
CDX98274 Canola nucleus 87.06 82.37
CDX91798 Canola cytosol 30.47 71.03
GSMUA_Achr7P26040_001 Banana cytosol 31.74 70.11
CDY72648 Canola cytosol 16.0 69.12
KRH32145 Soybean cytosol 55.15 63.84
VIT_07s0005g02970.t01 Wine grape cytosol 61.11 62.82
KRH19523 Soybean cytosol 57.45 62.67
CDX68955 Canola cytosol 27.06 61.15
Solyc06g083960.1.1 Tomato cytosol 58.21 60.05
OQU76115 Sorghum cytosol 60.09 47.67
Zm00001d044819_P002 Maize cytosol 60.85 46.76
Os06t0488200-01 Rice cytosol, plasma membrane 60.77 46.7
CDX95235 Canola cytosol 59.4 45.44
TraesCS7D01G190300.1 Wheat cytosol 58.98 45.29
CDY42350 Canola cytosol 57.87 45.24
TraesCS7B01G094100.1 Wheat cytosol 58.89 45.17
CDX81833 Canola cytosol 56.0 44.91
HORVU7Hr1G038500.56 Barley cytosol 59.57 44.81
CDY66597 Canola cytosol 57.62 44.48
GSMUA_Achr4P14090_001 Banana cytosol 58.72 44.4
CDY31130 Canola cytosol, mitochondrion 57.7 44.03
CDY45087 Canola cytosol 57.62 43.71
CDX70927 Canola cytosol 57.7 43.57
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 55.91 43.34
CDY51846 Canola cytosol 57.79 42.95
CDY32922 Canola cytosol 53.62 41.8
CDY64313 Canola cytosol 53.62 41.42
CDY32531 Canola endoplasmic reticulum 53.11 41.3
CDY10075 Canola endoplasmic reticulum 53.11 41.19
CDX94736 Canola cytosol 53.36 41.03
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 53.53 40.84
CDX79446 Canola cytosol 53.62 40.46
CDX84752 Canola cytosol 53.62 40.36
CDY39766 Canola cytosol 49.45 39.52
CDY03315 Canola cytosol 49.36 39.43
CDX79520 Canola endoplasmic reticulum 50.38 39.15
CDX93542 Canola cytosol 56.6 38.42
CDX95038 Canola cytosol 55.15 38.3
CDY31978 Canola cytosol 49.87 38.1
CDY05734 Canola cytosol 49.79 37.07
GSMUA_Achr4P07150_001 Banana cytosol, mitochondrion, nucleus, plastid 61.19 35.86
CDX84695 Canola cytosol 52.85 35.81
CDX86626 Canola cytosol 52.17 35.07
CDY15512 Canola cytosol 52.17 34.93
CDY19473 Canola cytosol 51.66 34.67
CDX72393 Canola cytosol 44.09 34.4
CDY46128 Canola cytosol 43.83 34.29
CDY17154 Canola cytosol 51.49 33.1
CDY65572 Canola plastid 52.77 32.61
CDY35211 Canola plastid 52.68 32.48
CDX75338 Canola cytosol 44.68 31.68
CDY42506 Canola cytosol, plastid 29.79 30.46
CDY36068 Canola cytosol, mitochondrion 29.19 30.27
CDY22791 Canola cytosol, plastid 29.79 30.25
CDY29324 Canola cytosol 29.45 30.14
CDY24591 Canola cytosol, plastid 29.7 30.11
CDX82270 Canola cytosol 29.87 29.35
CDY53932 Canola cytosol, plastid 29.11 28.96
CDY52239 Canola cytosol 28.51 27.99
CDY18321 Canola cytosol 28.6 27.84
CDY28777 Canola cytosol 28.34 27.77
CDY14319 Canola cytosol, plastid 28.34 27.63
GSMUA_Achr7P26030_001 Banana cytosol 27.91 27.47
CDY69853 Canola endoplasmic reticulum 9.7 23.6
CDY25361 Canola cytosol 29.7 22.53
PGSC0003DMT400028274 Potato cytosol 11.49 18.12
CDY65579 Canola endoplasmic reticulum 15.91 16.56
CDY71471 Canola cytosol 3.66 8.87
CDX92461 Canola cytosol 2.13 5.4
CDY16536 Canola cytosol 1.87 4.9
CDY69448 Canola extracellular, golgi, mitochondrion 1.28 4.55
CDX72394 Canola nucleus 0.09 0.1
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078DP45EnsemblPlants:CDX88973ProteinID:CDX88973ProteinID:CDX88973.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016459GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00149082001InterPro:IPR000048InterPro:IPR001609InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF00612PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF652SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EEC2C9
SEG:seg:::::
Description
BnaA04g02130D
Coordinates
chrLK031857:+:309913..316352
Molecular Weight (calculated)
133310.0 Da
IEP (calculated)
5.802
GRAVY (calculated)
-0.552
Length
1175 amino acids
Sequence
(BLAST)
0001: MGENILVDSH VWVEDPETAW THGVVLNIKG DEAEVKTNYG KEVIAKLSKL YPKDAEAPSE GVEDMTRLSY LHEPAVLDNL ATRYGLNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE ASFKELSPHV FAIGGIAYRE MINEDRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAG EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LVDPKSFRYL NQSSCYELDG VNDAEEYIAT
0301: RRAMDVVGIS ETEQDAIFRV VAAILHLGNI EFCKGEDADS SSLKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYEKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYQTFKNH KRFIKPKLTR SDFTLVHYAG EVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKASSKSKFS
0601: SIGARFKLQL QQLMETLNLT EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLKRFIIL APEILKGEYE AGVACKWILD
0701: KKGLTGFQIG KSKVFLRAGQ MAELDAHRTK VLGEAAKMIQ GQVRTRLTRE RYVILRRASV NIQANWRANL ARKISRYMRR EEAAIKIQKN LRRQIAIKDY
0801: GNTKSSAVTL QSGLRTMVAR HEFHYKLKSK AATVIQAYWR GYSAVTDYKK LKKASLVYQS KLRGRIARKQ LGQSNQAEKK KETEHEREVE LSNGAEEAVD
0901: KSFVKHSDES DDEEVGHERE TTHSIQADDG IEKSLVKHSE DSDDEEIGRE RDTTHSIQAD DGIEKSVVMQ SEHSSDEEKG QTEHTIQAND GIENPFVLDS
1001: ENLYNNFSDV SHITNPFRDT EIESLTAEVE MLKALLQVEK QRADISERKC DEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS
1101: MSSTVAASAP VVRDDLADSS ENSEASSTDS DFTFPAPSSS SPDNPNQLQV IVQDLSTTEA KGTEIKKEGG FEDYF
Best Arabidopsis Sequence Match ( AT3G58160.1 )
(BLAST)
0001: MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT
0301: RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS
0601: SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE
0701: KKGLTGYQIG KSKVFLRAGQ MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR EEAAIKIQKN LRRQIAKKDY
0801: GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD
0901: MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD
1001: DEEIGHKRKT KHSIQAEDGI EKSFVVHSDQ SDDEEIGHER KTKHAIQVED GIQKSFVTCS EKPYNTFSVV SQITSPIRDT EIESLTAEVE MLKALLQVEK
1101: QRADISERKC AEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS MSASTMASAP VVRDDLADSS ENSEASSSDS DFTFPAPSPS
1201: SDNFSTFNPN QLQVIVQDLS TTEAKGTESY DSDKEGGFED YF
Arabidopsis Description
XI-JMyosin-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.