CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001768.1-P	Field mustard	cytosol	92.98	97.89
CDY36068	Canola	cytosol, mitochondrion	89.97	94.97
CDY24591	Canola	cytosol, plastid	89.88	92.75
AT3G19960.2	Thale cress	cytosol, plastid	85.62	87.07
CDY22791	Canola	cytosol, plastid	80.77	83.49
CDY42506	Canola	cytosol, plastid	80.1	83.38
CDY29324	Canola	cytosol	77.84	81.1
CDY53932	Canola	cytosol, plastid	77.59	78.58
VIT_10s0071g00210.t01	Wine grape	plastid	75.75	76.78
KRG90612	Soybean	cytosol	75.0	76.67
KRH36145	Soybean	cytosol	75.25	76.53
Solyc02g020910.2.1	Tomato	nucleus	73.08	75.54
KRG89103	Soybean	cytosol	74.0	75.26
KRH40907	Soybean	cytosol	72.99	74.62
Os10t0488800-01	Rice	cytosol	57.44	72.32
CDY25361	Canola	cytosol	88.71	68.5
HORVU1Hr1G043440.4	Barley	cytosol	63.96	67.76
Zm00001d013967_P004	Maize	mitochondrion	66.89	67.0
GSMUA_Achr1P01870_001	Banana	cytosol	70.4	66.4
EER94044	Sorghum	mitochondrion	66.3	66.3
Zm00001d032637_P004	Maize	mitochondrion	65.97	66.25
TraesCS1D01G159600.1	Wheat	mitochondrion	64.63	64.9
TraesCS1B01G179500.2	Wheat	mitochondrion	64.63	64.74
TraesCS1A01G162800.1	Wheat	mitochondrion	64.8	64.69
GSMUA_Achr2P10680_001	Banana	cytosol	64.63	61.25
CDY52239	Canola	cytosol	53.01	52.97
CDY28777	Canola	cytosol	52.34	52.21
CDY14319	Canola	cytosol, plastid	52.51	52.12
CDY18321	Canola	cytosol	52.17	51.7
CDX68955	Canola	cytosol	19.4	44.62
CDX91798	Canola	cytosol	18.06	42.86
CDY72648	Canola	cytosol	9.11	40.07
CDX88973	Canola	cytosol	29.35	29.87
CDY00546	Canola	cytosol	29.18	29.06
CDX67724	Canola	cytosol	28.51	27.84
CDX98274	Canola	nucleus	28.6	27.54
CDX81833	Canola	cytosol	33.19	27.1
CDY32922	Canola	cytosol	33.7	26.74
CDY64313	Canola	cytosol	33.78	26.56
CDX94736	Canola	cytosol	33.53	26.24
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.11	26.12
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.61	26.1
CDY66597	Canola	cytosol	33.19	26.08
CDY32531	Canola	endoplasmic reticulum	32.86	26.01
CDY03315	Canola	cytosol	31.86	25.9
CDY10075	Canola	endoplasmic reticulum	32.78	25.87
CDY39766	Canola	cytosol	31.77	25.85
CDX70927	Canola	cytosol	33.53	25.77
CDY45087	Canola	cytosol	33.36	25.76
CDY42350	Canola	cytosol	32.19	25.62
CDX95235	Canola	cytosol	32.69	25.46
CDY51846	Canola	cytosol	33.19	25.11
CDX72393	Canola	cytosol	31.52	25.03
CDY46128	Canola	cytosol	31.35	24.97
CDY31978	Canola	cytosol	31.69	24.64
CDY31130	Canola	cytosol, mitochondrion	31.52	24.48
CDX84752	Canola	cytosol	31.86	24.41
CDX79446	Canola	cytosol	31.77	24.41
CDY05734	Canola	cytosol	31.94	24.21
CDX79520	Canola	endoplasmic reticulum	30.6	24.21
CDX75338	Canola	cytosol	31.35	22.63
CDX84695	Canola	cytosol	31.86	21.97
CDX93542	Canola	cytosol	31.52	21.78
CDY15512	Canola	cytosol	31.77	21.65
CDY19473	Canola	cytosol	31.69	21.64
CDX95038	Canola	cytosol	30.6	21.63
CDX86626	Canola	cytosol	31.61	21.62
CDY65572	Canola	plastid	33.44	21.04
CDY35211	Canola	plastid	33.44	20.99
CDY17154	Canola	cytosol	32.02	20.95
CDY69853	Canola	endoplasmic reticulum	6.44	15.94
CDY65579	Canola	endoplasmic reticulum	8.28	8.77
CDY71471	Canola	cytosol	3.43	8.45
CDY16536	Canola	cytosol	2.84	7.57
CDX92461	Canola	cytosol	2.84	7.34
CDY69448	Canola	extracellular, golgi, mitochondrion	1.59	5.76
CDX72394	Canola	nucleus	0.25	0.3

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078CZJ3	EnsemblPlants:CDX82270	ProteinID:CDX82270	ProteinID:CDX82270.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	EnsemblPlantsGene:GSBRNA2T00137372001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096
PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015	SMART:SM00242
SUPFAM:SSF52540	UniParc:UPI0004EECBDB	SEG:seg	:	:	:

Description

BnaA03g35510D

Coordinates

chrLK031828:-:327947..334891

Molecular Weight (calculated)

135056.0 Da

IEP (calculated)

8.569

GRAVY (calculated)

-0.418

Length

1196 amino acids

Sequence
(BLAST)

0001: MAIYSLLQSP HLLLEDLCSL GPFFSPVAFS SPHRPFHSDL SSLQNQKLLL CGGFLLFLQE KMSQKVTPSM NSLKSLPADY RFDGSSVPRK GGFRNGISTS
0101: DTAAGDSEDS PYSGHVEQQS LSEDMDTDAA TMPLPQSNER RWSDTSAYAR KKILQSWIQL PNGNWELGKI LSTSGEESVI SLAEGKVIKV MSETLVPANP
0201: DILDGVDDLM QLSYLNEPSV LYNLNYRYNQ DMIYTKAGPV LVAVNPFKEV PLYGNSYIEA YRKRTNDSPH VYAIADTAIR EMIRDEVNQS IIISGESGAG
0301: KTETAKIAMQ YLAALGGGSG IEYEILKTNP ILEAFGNAKT LRNDNSSRFG KLIEIHFSET GKISGAQVQT FLLEKSRVVQ CAEGERSYHI FYQLCAGASS
0401: ALREKLNLKS AHEYKYLGQS NCYRINGVDD AERFHTVKEA LDIVHVSKED QESVFAMLAA VLWLGNVSFT VIDNENHVEP IADESLLTVA KLIGCNSNEL
0501: KLSLSKRNMR VGKDTIVQKL TLPQAIDARD ALAKSIYSCL FDWLVEQINK SLAVGKRRTG RSISILDIYG FESFDKNSFE QFCINYANER LQQHFNRHLF
0601: KLEQEEYIQD GIDWTRVDFE DNQDCLSLFE KKPLGLLSLL DEESTFPNGT DLTLANKLKQ HLISNSCFRG TREKLFTVVH YAGEVTYETT GFLEKNRDLL
0701: HLDSIQLLSS CSCHLPQAFA SSMLIQSEKP VVGPLHKAGG ADSQRLSVAT KFKGQLFQLM QRLGNTTPHF IRCIKPNNVQ SPGLYEQGLV LQQLRCCGVL
0801: EVVRISRSGF PTRMSHQKFA RRYGFLLVEN IADKDPLSVS VAILHQFNIL PEMYQVGYTK LFFRTGQIGV LEDTRNRTLH GILRVQSSFR GYKARCHLKE
0901: LRMGIYTLQS FVRGEKVRKE FAYLRKRHRA AATIQSQVKS KIARKQYQDV TEASLVIQSA IRGWLVRRCS GDIGWLKSGE VLVKASVLSE LQRRVLKSEA
1001: ALREKEEEND ILQQRLQQYE NRWSEYETKM KSMEEIWQKQ MRSLQSSLSI AKKSLAVEDS ARNSDASVNA SDATDWDSSS NQFKGGGGRQ QQQQRPMSAG
1101: LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS GQVEANLNPD RELRRLKQMF ETWKKDYGGR LRETKMILSK LGSEESGGSM EKVKRKWWGR RNSTRY

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.